Factsheet for VIT_11s0103g00490.t01

Subcellular Localization

min:

: max

Winner_takes_all: golgi, plastid

Predictor Summary:

plastid 4
mitochondrion 2
golgi 3
nucleus 1
extracellular 1
plasma membrane 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plastid
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
Plant-mPloc:	mitochondrion, nucleus, plastid
Predotar:	plastid
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH19073	Soybean	golgi	75.43	77.35
VIT_04s0008g02630.t01	Wine grape	golgi	71.71	73.91
KRH02808	Soybean	golgi	74.44	71.43
PGSC0003DMT400073984	Potato	golgi	69.23	70.99
Solyc07g008940.2.1	Tomato	golgi	68.73	70.48
HORVU2Hr1G100480.3	Barley	cytosol	54.34	67.38
CDX89388	Canola	cytosol	36.72	64.91
Zm00001d026261_P001	Maize	golgi, mitochondrion	61.04	64.23
Zm00001d024348_P002	Maize	mitochondrion	58.81	64.05
KXG24737	Sorghum	golgi	60.79	63.97
TraesCS2D01G428700.2	Wheat	mitochondrion	59.8	63.42
EES12818	Sorghum	golgi	60.79	63.31
TraesCS2B01G452200.4	Wheat	mitochondrion	59.31	62.89
Zm00001d002382_P002	Maize	golgi, mitochondrion	60.3	62.79
TraesCS2A01G430900.2	Wheat	mitochondrion	60.05	62.69
Bra036729.1-P	Field mustard	mitochondrion	61.54	62.63
AT4G30060.1	Thale cress	golgi	62.28	62.59
CDY66853	Canola	mitochondrion	61.29	62.37
Bra010307.1-P	Field mustard	golgi, mitochondrion	62.03	62.34
CDY03552	Canola	golgi, mitochondrion	61.79	62.09
CDY03361	Canola	mitochondrion	60.3	61.52
AT2G19160.1	Thale cress	golgi, mitochondrion	60.05	61.42
AT5G57270.5	Thale cress	golgi	58.56	60.82
CDY30178	Canola	mitochondrion	60.55	60.7
CDY46724	Canola	mitochondrion	60.55	60.55
CDY11878	Canola	golgi	58.06	60.15
CDX88613	Canola	golgi	58.06	60.15
Bra002743.1-P	Field mustard	golgi	58.06	60.15
CDY38285	Canola	golgi	58.06	60.15
Bra024111.1-P	Field mustard	mitochondrion	55.83	60.0
CDY49466	Canola	cytosol	38.21	59.92
CDY12850	Canola	mitochondrion	59.06	59.8
CDX83505	Canola	mitochondrion	59.06	59.8
Bra012167.1-P	Field mustard	mitochondrion	59.06	59.65
CDY01412	Canola	mitochondrion	59.06	59.65
CDY25922	Canola	golgi	57.57	59.64
CDY51089	Canola	golgi, mitochondrion	58.06	59.24
AT4G25870.1	Thale cress	cytosol, golgi, mitochondrion, plastid	56.82	58.87
Bra038843.1-P	Field mustard	mitochondrion	58.06	58.79
Bra013927.1-P	Field mustard	golgi, plastid	53.35	58.74
CDX94406	Canola	golgi	54.84	58.31
Os08t0225400-01	Rice	cytosol, golgi	59.55	58.11
CDX92736	Canola	mitochondrion	54.59	58.05
CDX82625	Canola	mitochondrion	56.58	57.72
CDY42774	Canola	mitochondrion	54.09	57.52
Bra010446.1-P	Field mustard	mitochondrion	52.61	54.5
Bra019138.1-P	Field mustard	plastid	52.36	54.1
CDY66012	Canola	mitochondrion	48.39	53.42
CDY57290	Canola	cytosol	42.93	50.0
CDY14193	Canola	mitochondrion	62.03	47.71
VIT_17s0000g03400.t01	Wine grape	cytosol	32.75	44.59
VIT_14s0006g02700.t01	Wine grape	cytosol	31.27	42.57
VIT_17s0000g03410.t01	Wine grape	cytosol	30.77	42.03
VIT_09s0002g02660.t01	Wine grape	cytosol	30.27	41.5
VIT_01s0011g03840.t01	Wine grape	cytosol	30.27	41.22
VIT_17s0000g03420.t01	Wine grape	cytosol	29.53	40.48
VIT_04s0008g00690.t01	Wine grape	golgi, nucleus, plasma membrane, plastid	34.99	36.62
VIT_14s0066g00820.t01	Wine grape	cytosol, golgi, mitochondrion, plastid	29.28	36.42
VIT_12s0035g01710.t01	Wine grape	golgi	32.51	34.56
VIT_01s0011g03850.t01	Wine grape	golgi, plastid	33.99	33.83
VIT_10s0116g00980.t01	Wine grape	golgi	31.51	33.42

Protein Annotations

EntrezGene:100262683	wikigene:100262683	MapMan:35.1	ProteinID:CCB62257	ProteinID:CCB62257.1	UniProt:F6I5N9
EMBL:FN596751	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008375	GO:GO:0016020
GO:GO:0016021	GO:GO:0016740	InterPro:Glyco_trans_14	EntrezGene:LOC100262683	wikigene:LOC100262683	PFAM:PF02485
PANTHER:PTHR31042	PANTHER:PTHR31042:SF1	TMHMM:TMhelix	UniParc:UPI000210AB27	ArrayExpress:VIT_11s0103g00490	EnsemblPlantsGene:VIT_11s0103g00490
EnsemblPlants:VIT_11s0103g00490.t01	unigene:Vvi.20673	RefSeq:XP_002267173	RefSeq:XP_002267173.1	SEG:seg	:

Description

No Description!

Coordinates

chr11:+:16502306..16510096

Molecular Weight (calculated)

47077.8 Da

IEP (calculated)

8.310

GRAVY (calculated)

-0.282

Length

403 amino acids

Sequence
(BLAST)

001: MSSLFLTSYC MRYTPSAWHL GMGDMQIMPG SRHRPPMKRP MWIIVLVSLV SMLLICAYVY PPRSHSACYV FSSRGCKAFT DWLPPIPARE YTDAEIASRV
101: VIKEILSMPP TQSRNPKLAF MFLTRGSLPF EMLWDKFFHG HEGRFSVYVH ASKERPIHVS RYFVNQDIHS EKVIWGKISM VDAEKRLLAH ALKDPDNQHF
201: VLLSDSCVPL YKFDHVYNYL MYTNISYVDS FEDPGPHGNG RYSEHMLPEI EMSDFRKGAQ WFSMKRQHAL IVMADNLYYS KFKDYCKPGL EGRNCIADEH
301: YLPTFFHIID PGGIANWSVT HVDWSEAKWH PKSYRAQDVN FELLKNITSI DVSVHVTSDE RKERQVRPCL WNGMQRPCYL FARKFYPEAV DNLMFLFSNY
401: PTI

Best Arabidopsis Sequence Match ( AT4G30060.1 )
(BLAST)

001: MKAVKRWSIG NLADIPVSLP GARYRAPPPG RRRVWIIMVL SLITMFFIMA YMYPHHSKRA CYMISSRGCK ALADWLPPSL REYSDDEIAA RVVIREILSS
101: PPVIRKNSKI AFMFLTPGTL PFERLWDRFF LGHEGKFSVY IHASKERPVH YSRYFLNREI RSDEVVWGRI SMVDAERRLL ANALRDTSNQ QFVLLSDSCV
201: PLRSFEYIYN YLMHSNLSYV DCFDDPGQHG AGRHMNHMLP EIPKKDFRKG AQWFTMKRQH AVATMADSLY YSKFRDYCGP GIENNKNCIA DEHYLPTFFH
301: MLDPGGIANW TVTQVDWSER KWHPKTYMPE DITHELLNNL TSTDTLVHVT SVGMGEEIWM PCMWNGIQRP CYLFGRKFHP DTLDKLLDLF SNYTRSVTWN
401: L

Arabidopsis Description

Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q8W4E9]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.