Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| nucleus:
19621931
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d007436_P002 | Maize | nucleus | 83.72 | 86.06 |
| EES08635 | Sorghum | nucleus | 84.88 | 85.88 |
| Zm00001d052621_P002 | Maize | nucleus | 83.72 | 85.04 |
| HORVU4Hr1G034360.4 | Barley | nucleus | 81.78 | 82.75 |
| TraesCS4D01G158200.2 | Wheat | nucleus | 81.01 | 81.96 |
| TraesCS4B01G161200.1 | Wheat | nucleus | 80.23 | 81.5 |
| TraesCS4A01G151500.1 | Wheat | nucleus | 80.23 | 81.18 |
| KRH51962 | Soybean | golgi | 22.09 | 64.77 |
| GSMUA_Achr9P21090_001 | Banana | nucleus | 57.36 | 58.96 |
| GSMUA_Achr2P03550_001 | Banana | nucleus | 56.59 | 57.25 |
| GSMUA_Achr10P... | Banana | nucleus | 56.59 | 57.03 |
| Os05t0494100-01 | Rice | nucleus | 44.96 | 40.0 |
Protein Annotations
| Gene3D:1.10.20.10 | MapMan:15.3.5.7.1.1 | EntrezGene:4350685 | ProteinID:ABA94199.1 | EMBL:AK072844 | ProteinID:BAF28418.1 |
| ProteinID:BAT14362.1 | InterPro:CBFA_NFYB_domain | ProteinID:EAZ18663.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0046982 | EMBL:HQ858816 |
| InterPro:Histone-fold | InterPro:IPR009072 | EnsemblPlantsGene:Os11g0544700 | EnsemblPlants:Os11t0544700-01 | PFAM:PF00808 | PANTHER:PTHR10252 |
| PANTHER:PTHR10252:SF72 | UniProt:Q2R2Z2 | SUPFAM:SSF47113 | UniParc:UPI00000A95E2 | RefSeq:XP_015615139.1 | SEG:seg |
Description
DR1 ASSOCIATED PROTEIN 1Repressor protein. (Os11t0544700-01)
Coordinates
chr11:+:20026021..20029518
Molecular Weight (calculated)
28256.0 Da
IEP (calculated)
5.112
GRAVY (calculated)
-0.764
Length
258 amino acids
Sequence
(BLAST)
(BLAST)
001: MRKKLGTRFP AARIKKIMQA DEDVGKIALA VPVLVSRALE LFLQDLIDRT YEITLQSGAK TLNSFHLKQC VRRYSSFDFL TEVVNKVPDL GGADSCGDDR
101: ALPRRRKALP NGSDPENEES RSSKMAVRSA NISPRGRGRG RGRGRGRPPT KRKEVGYVQF EDESSMFADQ GEALPGEETV PETIHGTESV PPSTHPPAEA
201: PSAAEIPAPN PKVEEAKNDD HQPDWPMPDA IGNIGVGPSG FGHLTVQVDE DEDYDNED
101: ALPRRRKALP NGSDPENEES RSSKMAVRSA NISPRGRGRG RGRGRGRPPT KRKEVGYVQF EDESSMFADQ GEALPGEETV PETIHGTESV PPSTHPPAEA
201: PSAAEIPAPN PKVEEAKNDD HQPDWPMPDA IGNIGVGPSG FGHLTVQVDE DEDYDNED
001: MRKKLDTRFP AARIKKIMQA DEDVGKIALA VPVLVSKSLE LFLQDLCDRT YEITLERGAK TVSSLHLKHC VERYNVFDFL REVVSKVPDY GHSQGQGHGD
101: VTMDDRSISK RRKPISDEVN DSDEEYKKSK TQEIGSAKTS GRGGRGRGRG RGRGGRAAKA AEREGLNREM EVEAANSGQP PPEDNVKMHA SESSPQEDEK
201: KGIDGTAASN EDTKQHLQSP KEGIDFDLNA ESLDLNETKL APATGTTTTT TAATDSEEYS GWPMMDISKM DPAQLASLGK RIDEDEEDYD EEG
101: VTMDDRSISK RRKPISDEVN DSDEEYKKSK TQEIGSAKTS GRGGRGRGRG RGRGGRAAKA AEREGLNREM EVEAANSGQP PPEDNVKMHA SESSPQEDEK
201: KGIDGTAASN EDTKQHLQSP KEGIDFDLNA ESLDLNETKL APATGTTTTT TAATDSEEYS GWPMMDISKM DPAQLASLGK RIDEDEEDYD EEG
Arabidopsis Description
NF-YC11NF-YC11 [Source:UniProtKB/TrEMBL;Acc:A0A178VDL4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.