Factsheet for Zm00001d052621_P002

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES08635	Sorghum	nucleus	95.67	95.29
Zm00001d007436_P002	Maize	nucleus	89.37	90.44
Os11t0544700-01	Rice	nucleus	85.04	83.72
HORVU4Hr1G034360.4	Barley	nucleus	82.28	81.96
TraesCS4A01G151500.1	Wheat	nucleus	81.5	81.18
TraesCS4D01G158200.2	Wheat	nucleus	81.5	81.18
TraesCS4B01G161200.1	Wheat	nucleus	79.92	79.92
KRH51962	Soybean	golgi	21.65	62.5
GSMUA_Achr10P...	Banana	nucleus	57.87	57.42
GSMUA_Achr9P21090_001	Banana	nucleus	56.69	57.37
GSMUA_Achr2P03550_001	Banana	nucleus	56.69	56.47
Zm00001d038557_P001	Maize	golgi	42.91	32.25

Protein Annotations

Gene3D:1.10.20.10	MapMan:15.3.5.7.1.1	EntrezGene:541965	EMBL:AF464905	ProteinID:AQK57529.1	ProteinID:AQK57530.1
EMBL:BT035853	InterPro:CBFA_NFYB_domain	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0046982	InterPro:Histone-fold	InterPro:IPR009072
PFAM:PF00808	PANTHER:PTHR10252	PANTHER:PTHR10252:SF72	UniProt:Q8W0W6	SUPFAM:SSF47113	UniParc:UPI00000AB54F
EnsemblPlantsGene:Zm00001d052621	EnsemblPlants:Zm00001d052621_P002	EnsemblPlants:Zm00001d052621_T002	SEG:seg	:	:

Description

CCAAT-HAP5-transcription factor 59 CCAAT-HAP5-transcription factor 59

Coordinates

chr4:+:195062098..195068004

Molecular Weight (calculated)

27892.6 Da

IEP (calculated)

5.098

GRAVY (calculated)

-0.774

Length

254 amino acids

Sequence
(BLAST)

001: MRKKLGTRFP AARIKKIMQA DEDVGKIALA VPVLVSRSLE LFLQDLIDRT YEITLQSGAK TLNSFHLKQC VKRYSSFDFL TEVVSKVPDL GGADSCGDER
101: GLPRRRKSNG SDPENDESRS SKMAIRNANI SPRGRGRGRG RGRGRPPTKR KEVGYVQFED ESSMFAEQGE PLPGEETVQE INGNETMPQS TQPPVEAPPT
201: ALAQATTSSK AEEANSDHQS DWPMPDAIGS IGVVPSGFGH LTVQVEDEDY DNED

Best Arabidopsis Sequence Match ( AT3G12480.1 )
(BLAST)

001: MRKKLDTRFP AARIKKIMQA DEDVGKIALA VPVLVSKSLE LFLQDLCDRT YEITLERGAK TVSSLHLKHC VERYNVFDFL REVVSKVPDY GHSQGQGHGD
101: VTMDDRSISK RRKPISDEVN DSDEEYKKSK TQEIGSAKTS GRGGRGRGRG RGRGGRAAKA AEREGLNREM EVEAANSGQP PPEDNVKMHA SESSPQEDEK
201: KGIDGTAASN EDTKQHLQSP KEGIDFDLNA ESLDLNETKL APATGTTTTT TAATDSEEYS GWPMMDISKM DPAQLASLGK RIDEDEEDYD EEG

Arabidopsis Description

NF-YC11NF-YC11 [Source:UniProtKB/TrEMBL;Acc:A0A178VDL4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.