Factsheet for Zm00001d038557_P001

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

mitochondrion 2
golgi 4
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	mitochondrion, secretory
iPSORT:	mitochondrion
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH73503	Soybean	cytosol	3.25	100.0
OQU78230	Sorghum	nucleus	67.46	77.55
HORVU1Hr1G067880.1	Barley	nucleus	52.66	63.35
TraesCS1B01G322000.1	Wheat	nucleus	52.37	62.54
TraesCS1A01G310700.1	Wheat	nucleus	52.37	62.54
TraesCS1D01G310200.1	Wheat	nucleus	52.37	62.32
Os05t0494100-01	Rice	nucleus	52.66	61.38
HORVU1Hr1G067990.1	Barley	nucleus	54.14	58.47
PGSC0003DMT400008518	Potato	nucleus	41.42	50.72
Solyc01g096710.2.1	Tomato	nucleus	40.83	50.0
KRH14638	Soybean	nucleus	37.87	46.72
VIT_06s0009g02120.t01	Wine grape	nucleus	41.42	46.51
KRH20611	Soybean	nucleus	38.76	45.64
KRH73504	Soybean	nucleus	35.8	45.15
PGSC0003DMT400070450	Potato	nucleus	39.05	45.05
KRH56225	Soybean	nucleus	38.76	44.86
VIT_13s0084g00040.t01	Wine grape	nucleus	43.2	44.79
KRH13272	Soybean	nucleus	39.05	44.15
Solyc11g072150.1.1	Tomato	nucleus	39.35	43.61
Zm00001d007436_P002	Maize	nucleus	31.95	43.03
Zm00001d052621_P002	Maize	nucleus	32.25	42.91
CDX73821	Canola	nucleus	36.09	42.51
CDY50522	Canola	nucleus	35.8	41.87
CDY00772	Canola	nucleus	35.5	41.81
CDY00771	Canola	nucleus	35.5	41.81
AT5G19490.1	Thale cress	nucleus	32.54	41.67
AT3G12480.1	Thale cress	nucleus	36.09	41.64
Bra038724.1-P	Field mustard	nucleus	35.8	41.58
CDX70004	Canola	nucleus	36.69	41.47
CDX99011	Canola	nucleus	36.98	41.39
CDY42268	Canola	mitochondrion, nucleus	31.66	41.31
Bra009295.1-P	Field mustard	nucleus	36.39	41.0
CDY50342	Canola	nucleus	35.21	40.61
GSMUA_Achr4P00270_001	Banana	mitochondrion	30.47	38.87
CDY08432	Canola	nucleus	17.46	27.83
Bra034756.1-P	Field mustard	nucleus	20.41	27.27

Protein Annotations

Gene3D:1.10.20.10	EntrezGene:100284240	MapMan:15.3.5.7.1.1	UniProt:A0A1D6M765	ProteinID:AQK86908.1	ProteinID:AQK86910.1
InterPro:CBFA_NFYB_domain	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0016020	GO:GO:0016021	GO:GO:0046982	InterPro:Histone-fold
InterPro:IPR009072	PFAM:PF00808	PANTHER:PTHR10252	PANTHER:PTHR10252:SF77	SUPFAM:SSF47113	TMHMM:TMhelix
UniParc:UPI000844F171	EnsemblPlantsGene:Zm00001d038557	EnsemblPlants:Zm00001d038557_P001	EnsemblPlants:Zm00001d038557_T001	SEG:seg	:

Description

CCAAT-HAP5-transcription factor 510nuclear factor Y subunit C11

Coordinates

chr6:+:159799343..159805085

Molecular Weight (calculated)

38295.2 Da

IEP (calculated)

5.376

GRAVY (calculated)

-0.642

Length

338 amino acids

Sequence
(BLAST)

001: MRKKLDTRFP AFPYGFAYFL FLVKGFPMIF LHWYALSLWL PQRGSCLSRF SFESYMLNYQ PRIKKIMQTD EDVGKIAQAV PVLVSKALEL FLQDLCDRTY
101: DITIRKGVKT VGSSHLKQCI QTYNVYDFLR EVVSKVPDIG PSDVIADDKL GKRRKAEEDG SEEELKRTRN ETESHTSNGR GRGRGRGRGR RSVRGPWREV
201: VTSPEQFKEE NQSSKVASLK VEVADEVSNV TEAKQDTTPM SNARPSLRNI DLNLDPTDEE DEVTVPPEPQ LSAPATSCAA ATAAPGPSVP RLREGAKLKD
301: FFGAWELADM NKMEMDPVQF ALSTNHRLEE DEDYDNED

Best Arabidopsis Sequence Match ( AT3G12480.1 )
(BLAST)

001: MRKKLDTRFP AARIKKIMQA DEDVGKIALA VPVLVSKSLE LFLQDLCDRT YEITLERGAK TVSSLHLKHC VERYNVFDFL REVVSKVPDY GHSQGQGHGD
101: VTMDDRSISK RRKPISDEVN DSDEEYKKSK TQEIGSAKTS GRGGRGRGRG RGRGGRAAKA AEREGLNREM EVEAANSGQP PPEDNVKMHA SESSPQEDEK
201: KGIDGTAASN EDTKQHLQSP KEGIDFDLNA ESLDLNETKL APATGTTTTT TAATDSEEYS GWPMMDISKM DPAQLASLGK RIDEDEEDYD EEG

Arabidopsis Description

NF-YC11NF-YC11 [Source:UniProtKB/TrEMBL;Acc:A0A178VDL4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.