Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH73503 | Soybean | cytosol | 3.74 | 100.0 |
| Zm00001d038557_P001 | Maize | golgi | 77.55 | 67.46 |
| HORVU1Hr1G067880.1 | Barley | nucleus | 61.56 | 64.41 |
| TraesCS1D01G310200.1 | Wheat | nucleus | 61.56 | 63.73 |
| TraesCS1B01G322000.1 | Wheat | nucleus | 60.54 | 62.9 |
| TraesCS1A01G310700.1 | Wheat | nucleus | 60.2 | 62.54 |
| Os05t0494100-01 | Rice | nucleus | 61.22 | 62.07 |
| HORVU1Hr1G067990.1 | Barley | nucleus | 62.93 | 59.11 |
| PGSC0003DMT400008518 | Potato | nucleus | 45.24 | 48.19 |
| Solyc01g096710.2.1 | Tomato | nucleus | 44.56 | 47.46 |
| KRH14638 | Soybean | nucleus | 43.88 | 47.08 |
| VIT_06s0009g02120.t01 | Wine grape | nucleus | 47.62 | 46.51 |
| KRH73504 | Soybean | nucleus | 41.84 | 45.9 |
| VIT_13s0084g00040.t01 | Wine grape | nucleus | 49.32 | 44.48 |
| EES08635 | Sorghum | nucleus | 38.44 | 44.31 |
| KRH20611 | Soybean | nucleus | 42.86 | 43.9 |
| KRH13272 | Soybean | nucleus | 44.56 | 43.81 |
| KRH56225 | Soybean | nucleus | 43.2 | 43.49 |
| CDX99011 | Canola | nucleus | 44.22 | 43.05 |
| PGSC0003DMT400070450 | Potato | nucleus | 42.52 | 42.66 |
| CDX70004 | Canola | nucleus | 43.2 | 42.47 |
| CDX73821 | Canola | nucleus | 40.82 | 41.81 |
| AT5G19490.1 | Thale cress | nucleus | 37.41 | 41.67 |
| Solyc11g072150.1.1 | Tomato | nucleus | 43.2 | 41.64 |
| Bra009295.1-P | Field mustard | nucleus | 42.18 | 41.33 |
| CDY00772 | Canola | nucleus | 40.14 | 41.12 |
| CDY42268 | Canola | mitochondrion, nucleus | 36.05 | 40.93 |
| CDY50522 | Canola | nucleus | 40.14 | 40.83 |
| CDY00771 | Canola | nucleus | 39.8 | 40.77 |
| GSMUA_Achr4P00270_001 | Banana | mitochondrion | 36.73 | 40.75 |
| Bra038724.1-P | Field mustard | nucleus | 40.14 | 40.55 |
| AT3G12480.1 | Thale cress | nucleus | 40.14 | 40.27 |
| CDY50342 | Canola | nucleus | 39.46 | 39.59 |
| CDY08432 | Canola | nucleus | 19.73 | 27.36 |
| Bra034756.1-P | Field mustard | nucleus | 21.43 | 24.9 |
Protein Annotations
| Gene3D:1.10.20.10 | MapMan:15.3.5.7.1.1 | UniProt:C5Z0A2 | InterPro:CBFA_NFYB_domain | ProteinID:EES18432.1 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0046982 | InterPro:Histone-fold | InterPro:IPR009072 | EnsemblPlants:OQU78230 | ProteinID:OQU78230 | ProteinID:OQU78230.1 |
| PFAM:PF00808 | PANTHER:PTHR10252 | PANTHER:PTHR10252:SF77 | EnsemblPlantsGene:SORBI_3009G181900 | SUPFAM:SSF47113 | unigene:Sbi.15727 |
| UniParc:UPI0001A88A67 | RefSeq:XP_002440002.1 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr9:+:53578170..53583942
Molecular Weight (calculated)
32115.5 Da
IEP (calculated)
4.955
GRAVY (calculated)
-0.719
Length
294 amino acids
Sequence
(BLAST)
(BLAST)
001: MRKKLDTRFP APRIKKIMQA DEDVGKIALA VPVLVSKALE LFLQDLCDRT YDITIRKGVK TVGSSHLKQC IQTYNVYDFL TEVVSKVPDI GPSDVIADDK
101: LGKRRKAEED GSEEELKRTR NETESYTSNG RGRGRGRGRG RRGRGAWREV VTTHEQFAEN QSSKLASLKV EVADEVSNAT EAKEATTPVS NARASIRNID
201: LNLDPTDDED DVTVPPQAQL SAPATSSAAA TAGPGPSAAG PGPSVPRSKE GAKLKDFLGA WGLPDMSNME MDPVQFALST NHRVEEDEDY DNED
101: LGKRRKAEED GSEEELKRTR NETESYTSNG RGRGRGRGRG RRGRGAWREV VTTHEQFAEN QSSKLASLKV EVADEVSNAT EAKEATTPVS NARASIRNID
201: LNLDPTDDED DVTVPPQAQL SAPATSSAAA TAGPGPSAAG PGPSVPRSKE GAKLKDFLGA WGLPDMSNME MDPVQFALST NHRVEEDEDY DNED
001: MRKKLDTRFP AARIKKIMQA DEDVGKIALA VPVLVSKSLE LFLQDLCDRT YEITLERGAK TVSSLHLKHC VERYNVFDFL REVVSKVPDY GHSQGQGHGD
101: VTMDDRSISK RRKPISDEVN DSDEEYKKSK TQEIGSAKTS GRGGRGRGRG RGRGGRAAKA AEREGLNREM EVEAANSGQP PPEDNVKMHA SESSPQEDEK
201: KGIDGTAASN EDTKQHLQSP KEGIDFDLNA ESLDLNETKL APATGTTTTT TAATDSEEYS GWPMMDISKM DPAQLASLGK RIDEDEEDYD EEG
101: VTMDDRSISK RRKPISDEVN DSDEEYKKSK TQEIGSAKTS GRGGRGRGRG RGRGGRAAKA AEREGLNREM EVEAANSGQP PPEDNVKMHA SESSPQEDEK
201: KGIDGTAASN EDTKQHLQSP KEGIDFDLNA ESLDLNETKL APATGTTTTT TAATDSEEYS GWPMMDISKM DPAQLASLGK RIDEDEEDYD EEG
Arabidopsis Description
NF-YC11NF-YC11 [Source:UniProtKB/TrEMBL;Acc:A0A178VDL4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.