Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH73503 | Soybean | cytosol | 3.79 | 100.0 |
| TraesCS1D01G310200.1 | Wheat | nucleus | 70.0 | 71.48 |
| TraesCS1B01G322000.1 | Wheat | nucleus | 69.31 | 71.02 |
| TraesCS1A01G310700.1 | Wheat | nucleus | 69.31 | 71.02 |
| HORVU1Hr1G067880.1 | Barley | nucleus | 65.17 | 67.26 |
| OQU78230 | Sorghum | nucleus | 62.07 | 61.22 |
| HORVU1Hr1G067990.1 | Barley | nucleus | 65.17 | 60.38 |
| Zm00001d038557_P001 | Maize | golgi | 61.38 | 52.66 |
| KRH20611 | Soybean | nucleus | 47.59 | 48.08 |
| VIT_06s0009g02120.t01 | Wine grape | nucleus | 49.66 | 47.84 |
| KRH13272 | Soybean | nucleus | 48.62 | 47.16 |
| KRH73504 | Soybean | nucleus | 43.1 | 46.64 |
| PGSC0003DMT400070450 | Potato | nucleus | 46.9 | 46.42 |
| Solyc01g096710.2.1 | Tomato | nucleus | 44.14 | 46.38 |
| PGSC0003DMT400008518 | Potato | nucleus | 43.79 | 46.01 |
| VIT_13s0084g00040.t01 | Wine grape | nucleus | 51.72 | 46.01 |
| CDY42268 | Canola | mitochondrion, nucleus | 41.03 | 45.95 |
| KRH56225 | Soybean | nucleus | 46.21 | 45.89 |
| KRH14638 | Soybean | nucleus | 43.1 | 45.62 |
| Os11t0544700-01 | Rice | nucleus | 40.0 | 44.96 |
| Solyc11g072150.1.1 | Tomato | nucleus | 46.55 | 44.26 |
| CDX73821 | Canola | nucleus | 43.79 | 44.25 |
| AT5G19490.1 | Thale cress | nucleus | 40.0 | 43.94 |
| CDY00771 | Canola | nucleus | 43.45 | 43.9 |
| CDY00772 | Canola | nucleus | 43.45 | 43.9 |
| CDX70004 | Canola | nucleus | 44.83 | 43.48 |
| CDY50522 | Canola | nucleus | 43.1 | 43.25 |
| Bra038724.1-P | Field mustard | nucleus | 42.76 | 42.61 |
| CDX99011 | Canola | nucleus | 44.14 | 42.38 |
| AT3G12480.1 | Thale cress | nucleus | 42.76 | 42.32 |
| CDY50342 | Canola | nucleus | 42.41 | 41.98 |
| Bra009295.1-P | Field mustard | nucleus | 42.76 | 41.33 |
| GSMUA_Achr4P00270_001 | Banana | mitochondrion | 37.59 | 41.13 |
| Bra034756.1-P | Field mustard | nucleus | 22.76 | 26.09 |
| CDY08432 | Canola | nucleus | 18.97 | 25.94 |
Protein Annotations
| Gene3D:1.10.20.10 | MapMan:15.3.5.7.1.1 | EntrezGene:4339189 | ProteinID:AAU44039.1 | EMBL:AB288048 | EMBL:AK068320 |
| ProteinID:BAF17837.1 | ProteinID:BAS94688.1 | InterPro:CBFA_NFYB_domain | ProteinID:EEE64209.1 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0046982 |
| InterPro:Histone-fold | InterPro:IPR009072 | EnsemblPlantsGene:Os05g0494100 | EnsemblPlants:Os05t0494100-01 | PFAM:PF00808 | PANTHER:PTHR10252 |
| PANTHER:PTHR10252:SF77 | UniProt:Q65X80 | SUPFAM:SSF47113 | UniParc:UPI000043F477 | RefSeq:XP_015639312.1 | SEG:seg |
Description
DR1 ASSOCIATED PROTEIN 2Histone-like transcription factor, Transcriptional repressor, Repressor of heading date, Inhibition of flowering under long-day condition (Os05t0494100-01)
Coordinates
chr5:+:24275966..24280288
Molecular Weight (calculated)
32216.6 Da
IEP (calculated)
4.893
GRAVY (calculated)
-0.751
Length
290 amino acids
Sequence
(BLAST)
(BLAST)
001: MRKKLDTRFP APRIKKIMQA DEDVGKIALA VPVLVSKALE LFLQDLCNRT YDITVQRGVK TLSSSHLKQC IHSYNVYDFL RDVVSKVPDM GTSDAGVDDK
101: LGKRRKTAED DSEEESKRTR NEAASQTSTG RGRGRGRGRG RRGGRVSERE IISAYEKFEE NHEFPPGQFS KPSQLKVDVS VDGTDAIETK EATPLSNARA
201: SLRNIDLNIE LTDYDDEGSA PLEVQPPAPA AGVVTTSSGP LVSEVNEEAK TKDFLGWQLP ELTKMAMDPV QFALSSNHRL EEDEDYDNEE
101: LGKRRKTAED DSEEESKRTR NEAASQTSTG RGRGRGRGRG RRGGRVSERE IISAYEKFEE NHEFPPGQFS KPSQLKVDVS VDGTDAIETK EATPLSNARA
201: SLRNIDLNIE LTDYDDEGSA PLEVQPPAPA AGVVTTSSGP LVSEVNEEAK TKDFLGWQLP ELTKMAMDPV QFALSSNHRL EEDEDYDNEE
001: MRKKLDTRFP AARIKKIMQA DEDVGKIALA VPVLVSKSLE LFLQDLCDRT YEITLERGAK TVSSLHLKHC VERYNVFDFL REVVSKVPDY GHSQGQGHGD
101: VTMDDRSISK RRKPISDEVN DSDEEYKKSK TQEIGSAKTS GRGGRGRGRG RGRGGRAAKA AEREGLNREM EVEAANSGQP PPEDNVKMHA SESSPQEDEK
201: KGIDGTAASN EDTKQHLQSP KEGIDFDLNA ESLDLNETKL APATGTTTTT TAATDSEEYS GWPMMDISKM DPAQLASLGK RIDEDEEDYD EEG
101: VTMDDRSISK RRKPISDEVN DSDEEYKKSK TQEIGSAKTS GRGGRGRGRG RGRGGRAAKA AEREGLNREM EVEAANSGQP PPEDNVKMHA SESSPQEDEK
201: KGIDGTAASN EDTKQHLQSP KEGIDFDLNA ESLDLNETKL APATGTTTTT TAATDSEEYS GWPMMDISKM DPAQLASLGK RIDEDEEDYD EEG
Arabidopsis Description
NF-YC11NF-YC11 [Source:UniProtKB/TrEMBL;Acc:A0A178VDL4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.