Factsheet for HORVU1Hr1G067990.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 2
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
iPSORT:	plastid
MultiLoc:	nucleus
TargetP:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH73503	Soybean	cytosol	3.51	100.0
HORVU1Hr1G067880.1	Barley	nucleus	80.51	89.68
TraesCS1D01G310200.1	Wheat	nucleus	73.48	80.99
TraesCS1A01G310700.1	Wheat	nucleus	72.84	80.57
TraesCS1B01G322000.1	Wheat	nucleus	72.52	80.21
Os05t0494100-01	Rice	nucleus	60.38	65.17
OQU78230	Sorghum	nucleus	59.11	62.93
Zm00001d038557_P001	Maize	golgi	58.47	54.14
PGSC0003DMT400070450	Potato	nucleus	42.81	45.73
Solyc01g096710.2.1	Tomato	nucleus	40.26	45.65
PGSC0003DMT400008518	Potato	nucleus	40.26	45.65
VIT_06s0009g02120.t01	Wine grape	nucleus	42.81	44.52
KRH20611	Soybean	nucleus	40.58	44.25
KRH13272	Soybean	nucleus	41.53	43.48
KRH14638	Soybean	nucleus	38.02	43.43
Solyc11g072150.1.1	Tomato	nucleus	42.17	43.28
KRH56225	Soybean	nucleus	40.26	43.15
CDX70004	Canola	nucleus	41.21	43.14
CDX73821	Canola	nucleus	39.3	42.86
CDX99011	Canola	nucleus	40.89	42.38
CDY50522	Canola	nucleus	38.98	42.21
KRH73504	Soybean	nucleus	36.1	42.16
VIT_13s0084g00040.t01	Wine grape	nucleus	43.77	42.02
CDY50342	Canola	nucleus	39.3	41.98
Bra038724.1-P	Field mustard	nucleus	38.98	41.92
CDY00772	Canola	nucleus	38.34	41.81
CDY00771	Canola	nucleus	38.34	41.81
Bra009295.1-P	Field mustard	nucleus	39.62	41.33
CDY42268	Canola	mitochondrion, nucleus	34.19	41.31
AT3G12480.1	Thale cress	nucleus	38.66	41.3
HORVU4Hr1G034360.4	Barley	nucleus	33.23	40.78
GSMUA_Achr4P00270_001	Banana	mitochondrion	34.19	40.38
AT5G19490.1	Thale cress	nucleus	33.87	40.15
Bra034756.1-P	Field mustard	nucleus	21.41	26.48
CDY08432	Canola	nucleus	17.57	25.94

Protein Annotations

EnsemblPlants:HORVU1Hr1G067990.1	EnsemblPlantsGene:HORVU1Hr1G067990	Gene3D:1.10.20.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0046982	InterPro:CBFA_NFYB_domain
InterPro:Histone-fold	InterPro:IPR009072	PANTHER:PTHR10252	PANTHER:PTHR10252:SF77	PFAM:PF00808	SEG:seg
SUPFAM:SSF47113	UniParc:UPI000B47C919	UniProt:A0A287G2B3	MapMan:15.3.5.7.1.1	:	:

Description

No Description!

Coordinates

chrchr1H:-:479735762..479740474

Molecular Weight (calculated)

35260.5 Da

IEP (calculated)

8.017

GRAVY (calculated)

-0.892

Length

313 amino acids

Sequence
(BLAST)

001: CPRLRPPRRS DLQPPRSLRR GRSLRRRRLR AMRKKLDTRF PAPRIKKIMQ ADEDVGKIAL AVPVLVSKAL ELFLQDLCDR TYNITIEKGV KTVSSSHLKQ
101: CIHSYDVYDF LKNVASKVPD LGAPDSNADD KLGKRRKHGE DESEEETKRT RNEAACHTSN GRGRGRGRGR GRRAGRGAER EIEHHELART EFSNPGHLKV
201: ETGDGFDTTE TKEHTPLSNA RASLRNIDLN LDLADYEEDT VAPQADPAAP VVIVASQVQT SGPSVSLLKE VETKDLLGWQ LPEMNKMALD PVQFALSSNH
301: RLEEEDEDYD NEE

Best Arabidopsis Sequence Match ( AT3G12480.1 )
(BLAST)

001: MRKKLDTRFP AARIKKIMQA DEDVGKIALA VPVLVSKSLE LFLQDLCDRT YEITLERGAK TVSSLHLKHC VERYNVFDFL REVVSKVPDY GHSQGQGHGD
101: VTMDDRSISK RRKPISDEVN DSDEEYKKSK TQEIGSAKTS GRGGRGRGRG RGRGGRAAKA AEREGLNREM EVEAANSGQP PPEDNVKMHA SESSPQEDEK
201: KGIDGTAASN EDTKQHLQSP KEGIDFDLNA ESLDLNETKL APATGTTTTT TAATDSEEYS GWPMMDISKM DPAQLASLGK RIDEDEEDYD EEG

Arabidopsis Description

NF-YC11NF-YC11 [Source:UniProtKB/TrEMBL;Acc:A0A178VDL4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.