Factsheet for HORVU1Hr1G067880.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
WoLF PSORT:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH73503	Soybean	cytosol	3.91	100.0
HORVU1Hr1G067990.1	Barley	nucleus	89.68	80.51
TraesCS1D01G310200.1	Wheat	nucleus	80.43	79.58
TraesCS1A01G310700.1	Wheat	nucleus	79.72	79.15
TraesCS1B01G322000.1	Wheat	nucleus	79.0	78.45
Os05t0494100-01	Rice	nucleus	67.26	65.17
OQU78230	Sorghum	nucleus	64.41	61.56
Zm00001d038557_P001	Maize	golgi	63.35	52.66
PGSC0003DMT400070450	Potato	nucleus	47.69	45.73
Solyc01g096710.2.1	Tomato	nucleus	44.84	45.65
PGSC0003DMT400008518	Potato	nucleus	44.84	45.65
KRH20611	Soybean	nucleus	45.91	44.95
VIT_06s0009g02120.t01	Wine grape	nucleus	48.04	44.85
Solyc11g072150.1.1	Tomato	nucleus	48.4	44.59
CDX73821	Canola	nucleus	45.2	44.25
CDX70004	Canola	nucleus	46.98	44.15
CDY50522	Canola	nucleus	45.2	43.94
Bra038724.1-P	Field mustard	nucleus	45.2	43.64
CDY00771	Canola	nucleus	44.48	43.55
CDX99011	Canola	nucleus	46.62	43.38
CDY50342	Canola	nucleus	45.2	43.34
CDY00772	Canola	nucleus	44.13	43.21
KRH13272	Soybean	nucleus	45.91	43.14
KRH14638	Soybean	nucleus	41.99	43.07
VIT_13s0084g00040.t01	Wine grape	nucleus	49.82	42.94
KRH73504	Soybean	nucleus	40.57	42.54
KRH56225	Soybean	nucleus	44.13	42.47
AT3G12480.1	Thale cress	nucleus	44.13	42.32
Bra009295.1-P	Field mustard	nucleus	44.13	41.33
CDY42268	Canola	mitochondrion, nucleus	37.72	40.93
HORVU4Hr1G034360.4	Barley	nucleus	36.65	40.39
GSMUA_Achr4P00270_001	Banana	mitochondrion	38.08	40.38
AT5G19490.1	Thale cress	nucleus	37.72	40.15
Bra034756.1-P	Field mustard	nucleus	24.2	26.88
CDY08432	Canola	nucleus	19.57	25.94

Protein Annotations

EnsemblPlants:HORVU1Hr1G067880.1	EnsemblPlantsGene:HORVU1Hr1G067880	Gene3D:1.10.20.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0046982	InterPro:CBFA_NFYB_domain
InterPro:Histone-fold	InterPro:IPR009072	PANTHER:PTHR10252	PANTHER:PTHR10252:SF77	PFAM:PF00808	SEG:seg
SUPFAM:SSF47113	UniParc:UPI000B470E50	UniProt:A0A287G291	MapMan:15.3.5.7.1.1	:	:

Description

No Description!

Coordinates

chrchr1H:-:479564885..479569215

Molecular Weight (calculated)

31371.6 Da

IEP (calculated)

5.309

GRAVY (calculated)

-0.811

Length

281 amino acids

Sequence
(BLAST)

001: MRKKLDTRFP APRIKKIMQA DEDVGKIALA VPVLVSKALE LFLQDLCDRT YNITIEKGVK TVSSSHLKQC IHSYDVYDFL KNVASKVPDL GAPDSNADDK
101: LGKRRKHGED ESEEETKRTR NEAACHTSNG RGRGRGRGRG RRAGRGAERE IEHHELARTE FSNPGHLKVE TGDGFDTTET KEHTPLSNAR ASLRNIDLNL
201: DLADYEEDTV APQADPAPVV IVASQVQTSG PSVSLLKEVE TKDLLGWQLP EMNKMALDPV QFALSSNHRL EEEDEDYDNE E

Best Arabidopsis Sequence Match ( AT3G12480.1 )
(BLAST)

001: MRKKLDTRFP AARIKKIMQA DEDVGKIALA VPVLVSKSLE LFLQDLCDRT YEITLERGAK TVSSLHLKHC VERYNVFDFL REVVSKVPDY GHSQGQGHGD
101: VTMDDRSISK RRKPISDEVN DSDEEYKKSK TQEIGSAKTS GRGGRGRGRG RGRGGRAAKA AEREGLNREM EVEAANSGQP PPEDNVKMHA SESSPQEDEK
201: KGIDGTAASN EDTKQHLQSP KEGIDFDLNA ESLDLNETKL APATGTTTTT TAATDSEEYS GWPMMDISKM DPAQLASLGK RIDEDEEDYD EEG

Arabidopsis Description

NF-YC11NF-YC11 [Source:UniProtKB/TrEMBL;Acc:A0A178VDL4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.