Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- cytosol 3
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc07g040710.2.1 | Tomato | cytosol | 95.92 | 95.92 |
| VIT_11s0016g01970.t01 | Wine grape | cytosol | 70.82 | 61.68 |
| PGSC0003DMT400021177 | Potato | cytosol, mitochondrion, nucleus, plastid | 64.59 | 61.43 |
| PGSC0003DMT400000881 | Potato | cytosol | 65.67 | 56.98 |
| PGSC0003DMT400006372 | Potato | endoplasmic reticulum, extracellular, golgi | 31.33 | 47.71 |
| PGSC0003DMT400072375 | Potato | cytosol | 40.99 | 40.99 |
| PGSC0003DMT400080788 | Potato | nucleus | 43.99 | 37.61 |
| PGSC0003DMT400022916 | Potato | cytosol | 40.34 | 36.15 |
| PGSC0003DMT400021529 | Potato | cytosol | 46.78 | 34.06 |
| PGSC0003DMT400060938 | Potato | nucleus, plastid | 44.21 | 29.39 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400082749 | EnsemblPlantsGene:PGSC0003DMG400032792 | EntrezGene:102592495 | PANTHER:PTHR31250 | PANTHER:PTHR31250:SF25 | PGSC:PGSC0003DMG400032792 |
| RefSeq:XP_006357710.1 | SEG:seg | UniParc:UPI000296992C | UniProt:M1D668 | MapMan:35.1 | : |
Description
Calmodulin-binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG400032792]
Coordinates
chr7:+:36350424..36352737
Molecular Weight (calculated)
52568.8 Da
IEP (calculated)
9.898
GRAVY (calculated)
-0.437
Length
466 amino acids
Sequence
(BLAST)
(BLAST)
001: MTVIRTNSFK GRESETITTK KKNSINVTNC EPLKLMLQTT LSFKNLVQVQ DSVVALPEPA IIFSPRPVCE LDAAAVKLQK VYKSYRTRRN LADCAVVVEE
101: LWWKALDFAA LKRSSVSFFN VEKPETAVSR WARARTRAAK VGKGLSKDEK AQKLALQHWL EAIDPRHRYG HNLHFYYDLW FLSESSQPFF YWLDVGDGKE
201: INLEKCPRTK LHHQCIKYLG PKERESYEVV IENGKLVYKQ SGVLVQSVEG SKSIFVLSTT RTLYVGKKQK GTFQHSSFLS GGAITAAGRL VAHSGILEAI
301: WPYSGHYHPT EENFKEFINF LEEHKVDLTN VKRCAVDDDN LSEASNSQPS VDLSIVEESE ERSTSKSKKP EDIIINKKAQ AFSFSKHLSS KWTSGTGPRI
401: GCVRDYPTEL QFRALEQVNL SPRVVNGGFN FSGPIPSPRP SPNIRLSPRI AHMGLPSPRT PISVPR
101: LWWKALDFAA LKRSSVSFFN VEKPETAVSR WARARTRAAK VGKGLSKDEK AQKLALQHWL EAIDPRHRYG HNLHFYYDLW FLSESSQPFF YWLDVGDGKE
201: INLEKCPRTK LHHQCIKYLG PKERESYEVV IENGKLVYKQ SGVLVQSVEG SKSIFVLSTT RTLYVGKKQK GTFQHSSFLS GGAITAAGRL VAHSGILEAI
301: WPYSGHYHPT EENFKEFINF LEEHKVDLTN VKRCAVDDDN LSEASNSQPS VDLSIVEESE ERSTSKSKKP EDIIINKKAQ AFSFSKHLSS KWTSGTGPRI
401: GCVRDYPTEL QFRALEQVNL SPRVVNGGFN FSGPIPSPRP SPNIRLSPRI AHMGLPSPRT PISVPR
001: MGLEVGSLCF KLKDGGLTSR TNSFKRDDTN RHQNSPKSTM ERSLSFNSWE VPKETKTDSD FEVLETKKST PNTLNGRNCE RIQIKKPTVT PPEPFVFFSP
101: RPVTELDAAA TTLQKVYKSY RTRRNLADCA VVVEELWWRT LEGAALDLSS VSFFGEEKHE TAVSKWARAR KRAAKVGKGL SKDEKAQKLA LQHWLEAIDP
201: RHRYGHNLHF YYDVWSASKS TQPFFYWLDI GDGKDVNLEK HPRSVLQKQC IRYLGPMERE AYEVIVEDGR LMYKQGMTLI NSTEEAKSIF VLSTTRNLYV
301: GIKKKGLFQH SSFLSGGATT AAGRLVARDG ILEAIWPYSG HYLPTEDNFK EFISFLEEHN VDLTNVKRCS VNEEYSSFKS TADEEEERKE VSEEVEIPSE
401: KEERARPVFD PVKRLSCKWT SGYGPRIGCV RDYPMELQAQ ALEQVSLSPR VSPANSYGPI PSPRPSPKVR VSPRLAYMGI PSPRAVKC
101: RPVTELDAAA TTLQKVYKSY RTRRNLADCA VVVEELWWRT LEGAALDLSS VSFFGEEKHE TAVSKWARAR KRAAKVGKGL SKDEKAQKLA LQHWLEAIDP
201: RHRYGHNLHF YYDVWSASKS TQPFFYWLDI GDGKDVNLEK HPRSVLQKQC IRYLGPMERE AYEVIVEDGR LMYKQGMTLI NSTEEAKSIF VLSTTRNLYV
301: GIKKKGLFQH SSFLSGGATT AAGRLVARDG ILEAIWPYSG HYLPTEDNFK EFISFLEEHN VDLTNVKRCS VNEEYSSFKS TADEEEERKE VSEEVEIPSE
401: KEERARPVFD PVKRLSCKWT SGYGPRIGCV RDYPMELQAQ ALEQVSLSPR VSPANSYGPI PSPRPSPKVR VSPRLAYMGI PSPRAVKC
Arabidopsis Description
EDA39calmodulin-binding family protein [Source:TAIR;Acc:AT4G33050]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.