Factsheet for PGSC0003DMT400006372

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 6
vacuole 5
plasma membrane 5
golgi 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, golgi
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g121770.1.1	Tomato	cytosol	61.44	70.41
Zm00001d050807_P001	Maize	cytosol	24.18	51.75
Zm00001d036000_P001	Maize	cytosol	21.24	46.1
Zm00001d042156_P001	Maize	mitochondrion	26.8	43.16
GSMUA_Achr8P24930_001	Banana	cytosol	46.73	37.14
PGSC0003DMT400082749	Potato	cytosol	47.71	31.33
GSMUA_Achr8P05470_001	Banana	plastid	50.33	30.86
PGSC0003DMT400021177	Potato	cytosol, mitochondrion, nucleus, plastid	48.04	30.0
GSMUA_Achr8P26270_001	Banana	plastid	46.41	29.58
GSMUA_Achr4P09170_001	Banana	cytosol	46.08	29.01
GSMUA_Achr3P25890_001	Banana	mitochondrion	48.69	28.76
GSMUA_Achr4P08700_001	Banana	extracellular, nucleus, plastid, vacuole	50.0	28.54
Zm00001d009755_P001	Maize	plastid	41.5	28.48
PGSC0003DMT400000881	Potato	cytosol	48.37	27.56
PGSC0003DMT400072375	Potato	cytosol	37.91	24.89
TraesCS3B01G238500.1	Wheat	cytosol, plastid	42.81	24.21
HORVU3Hr1G049640.1	Barley	plastid	43.14	23.96
TraesCS3D01G209200.2	Wheat	plastid	42.81	23.73
TraesCS3A01G206400.1	Wheat	plastid	42.81	23.56
Os01t0570800-01	Rice	plastid	43.79	23.55
Zm00001d044253_P001	Maize	plastid	41.5	22.6
EES03151	Sorghum	mitochondrion, plastid	41.83	22.22
PGSC0003DMT400080788	Potato	nucleus	39.22	22.02
EES18807	Sorghum	plastid	41.18	21.91
PGSC0003DMT400022916	Potato	cytosol	36.93	21.73
PGSC0003DMT400021529	Potato	cytosol	40.2	19.22
Zm00001d011228_P001	Maize	plastid	33.99	18.91
PGSC0003DMT400060938	Potato	nucleus, plastid	38.89	16.98
GSMUA_Achr3P32310_001	Banana	endoplasmic reticulum	46.73	15.87

Protein Annotations

EnsemblPlants:PGSC0003DMT400006372	EnsemblPlantsGene:PGSC0003DMG400002491	PANTHER:PTHR31250	PANTHER:PTHR31250:SF25	PGSC:PGSC0003DMG400002491	SEG:seg
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000295A33C	UniProt:M0ZR84	MapMan:35.1	:

Description

Calmodulin binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG400002491]

Coordinates

chr3:-:61026778..61029326

Molecular Weight (calculated)

34008.6 Da

IEP (calculated)

7.412

GRAVY (calculated)

-0.068

Length

306 amino acids

Sequence
(BLAST)

001: MAGFLVSVFV VVGSVFMGFG GSFGCCFVSD SSCWLQQCCF VVILAGDGGS DGFGVGYLVG LASSKLLRFM GCAPVWRKKE NCWVGGTCLG SFGGGVLPEK
101: EENEREFWIG KGSSKNEKAQ KLAIKSWLEA IDPRHRYGVN LNRYHDVWCN SGSSQPFFYW LDIGDGKEVI VEQCSRSDLQ SQCIKYLGPK EREAYEVIVK
201: NGKLIYKKNG VCVDTIEGTK WIFVLSTSRT LYVGQKQRHH FHHSSFLAGG ASLSSGRLVV SNGDLEAIWA YSGHYRPTEE QFEEIISFLQ DHHVDLTSVK
301: VNIFIN

Best Arabidopsis Sequence Match ( AT2G26190.1 )
(BLAST)

001: MGLSLSLLLS AWKEVVTTQF FSFKNPVESF LETRSFSLKL KEGGLTSRTN SFKSENPQEK SPKTGMERSL SFNSWEIVTE VETEPMNKED EEIVEPTKPA
101: RNSLNGRNCE RIQITKPTIT PPTPFVFFSP RPVTELDAAA TTLQKVYKSY RTRRNLADCA VVVEELWWKT LDAAALNLSS VAFFEEEKHE TAVSKWARAR
201: TRAAKVGKGL SKDEKAQKLA LQHWLEAIDP RHRYGHNLHF YYDVWSASMS AQPFFYWLDI GDGKDVNLEH HPRSVLQKQC IKYLGPLERE AYEVIVEDGK
301: LMNKQSMTLI NSTEDSKSIF VLSTTRTLYV GQKKKGRFQH SSFLSGGATT AAGRLVAREG ILEAIWPYSG HYLPTEDNFN EFISFLEENN VDMTNVKRCS
401: VNEEYSSFNS SGYEEEATKE EEAEKKPAET IVTEEQEEEK ERERPVFQLA KRLSCKWNSG VGPRIGCVRD YPMELQSQAF EQVSLSPRIS PGSTRFPSPY
501: GPIPSPRPSP RVRVSPRLAY MGIPSPRVQV NC

Arabidopsis Description

IQM4IQ domain-containing protein IQM4 [Source:UniProtKB/Swiss-Prot;Acc:O64851]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.