Factsheet for Zm00001d042156_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d005003_P002
Zm00001d008278_P001
Zm00001d010649_P001
Zm00001d028948_P001
Zm00001d038543_P004
Zm00001d038545_P001
Zm00001d041430_P001
Zm00001d043144_P001
Zm00001d047597_P001
Zm00001d052415_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G57010.1	Zm00001d005003_P002	AT5G21274.1	21798944
AT5G57010.1	Zm00001d008278_P001	AT5G21274.1	21798944
AT5G57010.1	Zm00001d010649_P001	AT5G21274.1	21798944
AT5G57010.1	Zm00001d028948_P001	AT5G21274.1	21798944
AT5G57010.1	Zm00001d038543_P004	AT5G21274.1	21798944
AT5G57010.1	Zm00001d038545_P001	AT5G21274.1	21798944
AT5G57010.1	Zm00001d041430_P001	AT5G21274.1	21798944
AT5G57010.1	Zm00001d043144_P001	AT5G21274.1	21798944
AT5G57010.1	Zm00001d047597_P001	AT5G21274.1	21798944
AT5G57010.1	Zm00001d052415_P001	AT5G21274.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d050807_P001	Maize	cytosol	68.95	91.61
Zm00001d036000_P001	Maize	cytosol	61.05	82.27
Solyc03g121770.1.1	Tomato	cytosol	42.11	29.96
PGSC0003DMT400006372	Potato	endoplasmic reticulum, extracellular, golgi	43.16	26.8
CDX75320	Canola	endoplasmic reticulum, extracellular	49.47	25.97
VIT_09s0002g04560.t01	Wine grape	cytosol	42.11	25.32
Zm00001d044253_P001	Maize	plastid	70.53	23.84
Zm00001d009755_P001	Maize	plastid	53.16	22.65
KRH19209	Soybean	cytosol	30.53	21.4
Os01t0570800-01	Rice	plastid	63.68	21.27
Bra017264.1-P	Field mustard	endoplasmic reticulum, extracellular	37.89	21.18
GSMUA_Achr8P26270_001	Banana	plastid	52.63	20.83
Zm00001d004916_P001	Maize	cytosol	40.0	20.71
Bra011409.1-P	Field mustard	plastid	50.53	20.34
CDX68935	Canola	plastid	50.0	20.26
KRH10031	Soybean	cytosol	50.0	20.17
CDX77035	Canola	plastid	50.0	19.83
GSMUA_Achr8P05470_001	Banana	plastid	51.58	19.64
GSMUA_Achr3P25890_001	Banana	mitochondrion	51.05	18.73
CDY45026	Canola	cytosol	50.0	18.45
KRH12419	Soybean	cytosol, plastid	51.05	18.41
KRH23287	Soybean	cytosol	48.95	18.31
KRH37419	Soybean	cytosol, extracellular, nucleus, plastid	50.53	18.18
VIT_04s0008g01070.t01	Wine grape	cytosol, extracellular, nucleus	51.58	18.15
VIT_11s0016g01970.t01	Wine grape	cytosol	51.05	18.13
KRH02687	Soybean	plastid	50.53	18.11
KRH44122	Soybean	nucleus	47.37	18.0
CDY35312	Canola	plastid	49.47	17.97
Bra034295.1-P	Field mustard	plastid	48.95	17.75
AT2G26190.1	Thale cress	plastid	49.47	17.67
KRH47098	Soybean	nucleus	46.32	17.64
AT4G33050.5	Thale cress	plastid	51.58	17.5
AT5G57010.1	Thale cress	cytosol	45.26	17.37
Bra002773.1-P	Field mustard	cytosol	46.32	17.36
Bra034546.1-P	Field mustard	cytosol	50.0	17.27
CDY28281	Canola	cytosol, plastid	50.0	17.06
Zm00001d011228_P001	Maize	plastid	48.95	16.91
Zm00001d037759_P002	Maize	mitochondrion	48.42	16.61
Zm00001d052525_P001	Maize	cytosol	40.0	16.24
Zm00001d035377_P001	Maize	cytosol	36.84	16.05
Zm00001d047402_P001	Maize	cytosol	45.26	15.99
Bra035643.1-P	Field mustard	cytosol	44.74	15.07
Zm00001d024699_P001	Maize	nucleus	23.16	13.92
Zm00001d027815_P002	Maize	nucleus	44.74	13.24
Zm00001d032981_P001	Maize	cytosol	45.26	13.11
Zm00001d022245_P001	Maize	cytosol	45.26	13.01
VIT_09s0002g01680.t01	Wine grape	plastid	49.47	9.33

Protein Annotations

EnsemblPlants:Zm00001d042156_P001	EnsemblPlants:Zm00001d042156_T001	EnsemblPlantsGene:Zm00001d042156	PANTHER:PTHR31250	PANTHER:PTHR31250:SF1	ProteinID:ONM34697.1
UniParc:UPI0008424E16	UniProt:A0A1D6N1V3	MapMan:35.1	:	:	:

Description

IQ domain-containing protein IQM5

Coordinates

chr3:-:154193631..154195926

Molecular Weight (calculated)

22382.9 Da

IEP (calculated)

9.051

GRAVY (calculated)

-0.479

Length

190 amino acids

Sequence
(BLAST)

001: MRPPLHLAIP IRLGRRARRH HLPQARPLLP VRYFVEEVIT GYDEIDLYKT WLQVGKGLSK DDKAQKLALQ HWLEAIDPRH RYGHNLHLYY DIWCANSSCE
101: PFFYWLDVGK GRDLHHQKCP RSKLNSQLIM YLGPNERAAY EVVVEEGRLL YKQSGDLVNT NEEYKWIFVL STSRSLYVRS QSECSVQLAF

Best Arabidopsis Sequence Match ( AT2G26190.2 )
(BLAST)

001: MGLSLSLLLS AWKEVVTTQF FSFKNPVESF LETRSFSLKL KEGGLTSRTN SFKSENPQEK SPKTGMERSL SFNSWEIVTE VETEPMNKED EEIVEPTKPA
101: RNSLNGRNCE RIQITKPTIT PPTPFVFFSP RPVTELDAAA TTLQKVYKSY RTRRNLADCA VVVEELWWKT LDAAALNLSS VAFFEEEKHE TAVSKWARAR
201: TRAAKVGKGL SKDEKAQKLA LQHWLEAIDP RHRYGHNLHF YYDVWSASMS AQPFFYWLDI GDGKDVNLEH HPRSVLQKQC IKYLGPLERE AYEVIVEDGK
301: LMNKQSMTLI NSTEDSKSIF VLSTTRTLYV GQKKKGRFQH SSFLSGGATT AAGRLVAREG ILEAIWPYSG HYLPTEDNFN EFISFLEENN VDMTNVKVRN
401: IIFGCIHAKY EKWYVLTYLI

Arabidopsis Description

IQM4IQ domain-containing protein IQM4 [Source:UniProtKB/Swiss-Prot;Acc:O64851]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.