CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG89812
KRG94975
KRH18664

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G57010.1	KRG89812	AT5G21274.1	21798944
AT5G57010.1	KRG94975	AT5G21274.1	21798944
AT5G57010.1	KRH18664	AT5G21274.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH23287	Soybean	cytosol	78.77	73.03
Zm00001d050807_P001	Maize	cytosol	18.26	60.14
KRH47098	Soybean	nucleus	63.06	59.52
KRH44122	Soybean	nucleus	62.21	58.6
VIT_09s0002g04560.t01	Wine grape	cytosol	38.43	57.28
Zm00001d036000_P001	Maize	cytosol	16.35	54.61
GSMUA_Achr8P24930_001	Banana	cytosol	41.61	50.91
Zm00001d042156_P001	Maize	mitochondrion	20.17	50.0
GSMUA_Achr8P26270_001	Banana	plastid	46.07	45.21
GSMUA_Achr4P09170_001	Banana	cytosol	45.65	44.24
KRH12419	Soybean	cytosol, plastid	49.47	44.21
KRH37419	Soybean	cytosol, extracellular, nucleus, plastid	48.62	43.37
GSMUA_Achr3P25890_001	Banana	mitochondrion	47.56	43.24
KRH02687	Soybean	plastid	48.62	43.21
Zm00001d009755_P001	Maize	plastid	40.76	43.05
GSMUA_Achr8P05470_001	Banana	plastid	45.44	42.89
AT5G57010.1	Thale cress	cytosol	44.8	42.63
KRH19209	Soybean	cytosol	24.2	42.07
Bra002773.1-P	Field mustard	cytosol	45.01	41.81
GSMUA_Achr4P08700_001	Banana	extracellular, nucleus, plastid, vacuole	45.86	40.3
Bra035643.1-P	Field mustard	cytosol	46.07	38.48
TraesCS3B01G238500.1	Wheat	cytosol, plastid	42.89	37.34
Zm00001d044253_P001	Maize	plastid	44.16	37.01
HORVU3Hr1G049640.1	Barley	plastid	43.1	36.84
TraesCS3D01G209200.2	Wheat	plastid	42.89	36.59
Os01t0570800-01	Rice	plastid	44.16	36.56
KRH30882	Soybean	cytosol	36.73	36.5
EES03151	Sorghum	mitochondrion, plastid	44.59	36.46
TraesCS3A01G206400.1	Wheat	plastid	42.89	36.33
KRG96176	Soybean	plastid	35.67	35.97
KRH32680	Soybean	cytosol	36.31	35.4
KRG97321	Soybean	nucleus	40.98	34.53
EES18807	Sorghum	plastid	41.83	34.26
KRH71773	Soybean	nucleus	40.34	33.93
KRH38004	Soybean	cytosol	41.4	32.77
Zm00001d011228_P001	Maize	plastid	37.79	32.36
KRH58931	Soybean	nucleus	43.52	31.25
KRH42833	Soybean	cytosol	43.52	31.01
KRH67885	Soybean	cytosol	19.96	26.4
GSMUA_Achr3P32310_001	Banana	endoplasmic reticulum	47.56	24.86
VIT_09s0002g01680.t01	Wine grape	plastid	50.74	23.71

Protein Annotations

EMBL:ACUP02009116	EnsemblPlants:KRH10031	EnsemblPlantsGene:GLYMA_15G025300	EntrezGene:100786055	PANTHER:PTHR31250	PANTHER:PTHR31250:SF27
ProteinID:KRH10031	ProteinID:KRH10031.1	UniParc:UPI0006ED7068	UniProt:A0A0R0G6C4	MapMan:35.1	:

Description

hypothetical protein

Coordinates

chr15:+:2042923..2050342

Molecular Weight (calculated)

53824.4 Da

IEP (calculated)

9.133

GRAVY (calculated)

-0.496

Length

471 amino acids

Sequence
(BLAST)

001: MQSDTKLTFC LWFHGRVYKR PGSAISKTKL CCIHETIKNL TFLLPGMGML AISKEGEVTV SFKNNINLND FYKPEQSTSL KRRKVGNLKL QTTFSFKHLL
101: SANCGSQEEV EDLFNKRSPM VLSKKPKQMF SPTSSDQLDL AALMIQKVYK SYRIRRNLAD CAVVCEELWW KDSMITAFNR CSISSFDSDK SEKAISKWTL
201: ARKMAAKVGK DLSKDDKAQK LALRHWLEAI DPRHRYGHNL HFYYLVWFHS QSCQPFFYWL DVGGGKELNL EECPTEQLQR QRIKYLGPEE REAYEVIVEG
301: GRLVYRQSRD LVHTTEDSKW IFVLSTSRIL YVGQKKKGQF QHSSFLAGGA TIASGRLVAQ NGVLHAIWPY SGHYRPTEKN FMEFISFLEE HKVDMTNVKR
401: DPIDEDVPPS NPVNEEPLFE YMEGNVGASD SANNCGKDVE ENKPMSSKWT TGVGPRIGCL RVSSKFPSSG I

Best Arabidopsis Sequence Match ( AT2G26190.1 )
(BLAST)

001: MGLSLSLLLS AWKEVVTTQF FSFKNPVESF LETRSFSLKL KEGGLTSRTN SFKSENPQEK SPKTGMERSL SFNSWEIVTE VETEPMNKED EEIVEPTKPA
101: RNSLNGRNCE RIQITKPTIT PPTPFVFFSP RPVTELDAAA TTLQKVYKSY RTRRNLADCA VVVEELWWKT LDAAALNLSS VAFFEEEKHE TAVSKWARAR
201: TRAAKVGKGL SKDEKAQKLA LQHWLEAIDP RHRYGHNLHF YYDVWSASMS AQPFFYWLDI GDGKDVNLEH HPRSVLQKQC IKYLGPLERE AYEVIVEDGK
301: LMNKQSMTLI NSTEDSKSIF VLSTTRTLYV GQKKKGRFQH SSFLSGGATT AAGRLVAREG ILEAIWPYSG HYLPTEDNFN EFISFLEENN VDMTNVKRCS
401: VNEEYSSFNS SGYEEEATKE EEAEKKPAET IVTEEQEEEK ERERPVFQLA KRLSCKWNSG VGPRIGCVRD YPMELQSQAF EQVSLSPRIS PGSTRFPSPY
501: GPIPSPRPSP RVRVSPRLAY MGIPSPRVQV NC

Arabidopsis Description

IQM4IQ domain-containing protein IQM4 [Source:UniProtKB/Swiss-Prot;Acc:O64851]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.