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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 7
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:mitochondrion, plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:plastid
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:plastid
PPI

Inferred distinct locusB in Crop

locusBlocations
Zm00001d005003_P002
Zm00001d008278_P001
Zm00001d010649_P001
Zm00001d028948_P001
Zm00001d038543_P004
Zm00001d038545_P001
Zm00001d041430_P001
Zm00001d043144_P001
Zm00001d047597_P001
Zm00001d052415_P001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G57010.1 Zm00001d005003_P002 AT5G21274.1 21798944
AT5G57010.1 Zm00001d008278_P001 AT5G21274.1 21798944
AT5G57010.1 Zm00001d010649_P001 AT5G21274.1 21798944
AT5G57010.1 Zm00001d028948_P001 AT5G21274.1 21798944
AT5G57010.1 Zm00001d038543_P004 AT5G21274.1 21798944
AT5G57010.1 Zm00001d038545_P001 AT5G21274.1 21798944
AT5G57010.1 Zm00001d041430_P001 AT5G21274.1 21798944
AT5G57010.1 Zm00001d043144_P001 AT5G21274.1 21798944
AT5G57010.1 Zm00001d047597_P001 AT5G21274.1 21798944
AT5G57010.1 Zm00001d052415_P001 AT5G21274.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES03151 Sorghum mitochondrion, plastid 86.83 84.72
Zm00001d050807_P001 Maize cytosol 21.0 82.52
Zm00001d011228_P001 Maize plastid 76.16 77.82
Zm00001d036000_P001 Maize cytosol 19.04 75.89
Zm00001d042156_P001 Maize mitochondrion 23.84 70.53
TraesCS3D01G209200.2 Wheat plastid 66.73 67.93
TraesCS3B01G238500.1 Wheat cytosol, plastid 65.3 67.84
HORVU3Hr1G049640.1 Barley plastid 66.19 67.51
TraesCS3A01G206400.1 Wheat plastid 66.73 67.45
Zm00001d009755_P001 Maize plastid 49.29 62.11
CDX75320 Canola endoplasmic reticulum, extracellular 39.32 61.05
Bra017264.1-P Field mustard endoplasmic reticulum, extracellular 35.41 58.53
CDX68935 Canola plastid 46.44 55.65
Solyc03g121770.1.1 Tomato cytosol 26.33 55.43
Bra011409.1-P Field mustard plastid 46.44 55.3
VIT_09s0002g04560.t01 Wine grape cytosol 30.96 55.06
GSMUA_Achr8P26270_001 Banana plastid 46.98 55.0
CDX77035 Canola plastid 46.62 54.7
GSMUA_Achr3P25890_001 Banana mitochondrion 50.18 54.44
GSMUA_Achr8P05470_001 Banana plastid 47.33 53.31
CDY35312 Canola plastid 47.69 51.24
Bra034295.1-P Field mustard plastid 47.69 51.15
KRH19209 Soybean cytosol 24.56 50.92
VIT_04s0008g01070.t01 Wine grape cytosol, extracellular, nucleus 48.75 50.74
CDY45026 Canola cytosol 46.26 50.49
AT2G26190.1 Thale cress plastid 47.51 50.19
VIT_11s0016g01970.t01 Wine grape cytosol 47.51 49.91
KRH12419 Soybean cytosol, plastid 46.26 49.34
KRH37419 Soybean cytosol, extracellular, nucleus, plastid 45.55 48.48
AT5G57010.1 Thale cress cytosol 42.7 48.48
KRH02687 Soybean plastid 45.2 47.92
Bra002773.1-P Field mustard cytosol 42.7 47.34
KRH47098 Soybean nucleus 41.99 47.29
Bra034546.1-P Field mustard cytosol 46.26 47.27
CDY28281 Canola cytosol, plastid 46.8 47.22
AT4G33050.5 Thale cress plastid 46.8 46.96
KRH44122 Soybean nucleus 41.28 46.4
Zm00001d004916_P001 Maize cytosol 29.36 44.96
KRH23287 Soybean cytosol 40.57 44.88
Zm00001d037759_P002 Maize mitochondrion 43.95 44.58
KRH10031 Soybean cytosol 37.01 44.16
Bra035643.1-P Field mustard cytosol 42.7 42.55
PGSC0003DMT400006372 Potato endoplasmic reticulum, extracellular, golgi 22.6 41.5
Zm00001d052525_P001 Maize cytosol 33.63 40.38
Zm00001d047402_P001 Maize cytosol 38.26 39.96
Zm00001d035377_P001 Maize cytosol 30.43 39.22
Zm00001d032981_P001 Maize cytosol 38.43 32.93
Zm00001d027815_P002 Maize nucleus 37.19 32.55
Zm00001d022245_P001 Maize cytosol 37.72 32.07
Zm00001d024699_P001 Maize nucleus 17.08 30.38
VIT_09s0002g01680.t01 Wine grape plastid 46.26 25.79
Protein Annotations
EMBL:BT055047EMBL:EU954588EnsemblPlants:Zm00001d044253_P001EnsemblPlants:Zm00001d044253_T001EnsemblPlantsGene:Zm00001d044253EntrezGene:100279877
PANTHER:PTHR31250PANTHER:PTHR31250:SF1ProteinID:ONM40553.1SEG:segUniParc:UPI000182AD49UniProt:B6SPC3
MapMan:35.1:::::
Description
IQ domain-containing protein IQM5
Coordinates
chr3:-:223073135..223075832
Molecular Weight (calculated)
62143.8 Da
IEP (calculated)
9.937
GRAVY (calculated)
-0.585
Length
562 amino acids
Sequence
(BLAST)
001: MSLGLLNTER NHLLSPKPQS PRDAAVSSLL RSPRASCGSC SQSPKPKPTK MAHGGLERSL SFKNWEADDS RGGINGARPG ALALQQQESP RRVVSVSPQA
101: QAMIEYISPR PRVELDQAAT TLQKMYKGLR TRRSLADGAI IAEELWWKTV DSVYLNIKSI SFFDEDKQET AASRWSRAGK RIAKVGKGLS KDDKAQKLAL
201: QHWLEAIDPR HRYGHNLHLY YDIWSASSSC EPFFYWLDVG NGRDLHHHKC PRSKLNSQLI MYLGPNERAA YEVVVEEGRL VYRQSGDPVS TNEESKWIFV
301: LSTSRSLYVG QKRKGKFQHS SFLSGAATSA AGRLVAKEGV LRAIWPYSGH YLPTEENFRE FIAFLEDNNV DLANVKRCSV DDDEFPSFKK PAAGTEEKQQ
401: AAEEAAPVAT EEEPRPVPEL PAVDIVKEGT GTAADAEPPK TAMGRRPSFK WSTPTGARIG CLQNYPADVQ SMALEQVNLS PRVAAVAPSP RLPIPSPRPS
501: PRIRLSPGLH YMGCPTPTGA SRLATPTPAC RRSSPKQQQQ QQHLMGFRAP AVALTLPKHK AK
Best Arabidopsis Sequence Match ( AT4G33050.3 )
(BLAST)
001: MGLEVGSLCF KLKDGGLTSR TNSFKRDDTN RHQNSPKSTM ERSLSFNSWE VPKETKTDSD FEVLETKKST PNTLNGRNCE RIQIKKPTVT PPEPFVFFSP
101: RPVTELDAAA TTLQKVYKSY RTRRNLADCA VVVEELWWRT LEGAALDLSS VSFFGEEKHE TAVSKWARAR KRAAKVGKGL SKDEKAQKLA LQHWLEAIDP
201: RHRYGHNLHF YYDVWSASKS TQPFFYWLDI GDGKDVNLEK HPRSVLQKQC IRYLGPMERE AYEVIVEDGR LMYKQGMTLI NSTEEAKSIF VLSTTRNLYV
301: GIKKKGLFQH SSFLSGGATT AAGRLVARDG ILEAIWPYSG HYLPTEDNFK EFISFLEEHN VDLTNVKRCS VNEEYSSFKS TADEEEERKE VSEEVEIPSE
401: KEERARPVFD PVKRLSCKWT SGYGPRIGCV RDYPMELQAQ ALEQVSLSPR VSPANSYGPI PSPRPSPKVR VSPRLAYMGI PSPRAVKC
Arabidopsis Description
EDA39calmodulin-binding family protein [Source:TAIR;Acc:AT4G33050]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.