Factsheet for Bra034546.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY45026	Canola	cytosol	93.27	99.61
Bra017264.1-P	Field mustard	endoplasmic reticulum, extracellular	55.27	89.41
Bra011409.1-P	Field mustard	plastid	74.36	86.65
AT4G33050.5	Thale cress	plastid	74.18	72.86
Bra034295.1-P	Field mustard	plastid	68.0	71.37
Zm00001d050807_P001	Maize	cytosol	16.18	62.24
PGSC0003DMT400021177	Potato	cytosol, mitochondrion, nucleus, plastid	54.0	60.61
VIT_04s0008g01070.t01	Wine grape	cytosol, extracellular, nucleus	56.55	57.59
KRH19209	Soybean	cytosol	28.18	57.2
GSMUA_Achr4P09170_001	Banana	cytosol	50.18	56.79
GSMUA_Achr8P26270_001	Banana	plastid	49.45	56.67
GSMUA_Achr8P24930_001	Banana	cytosol	39.64	56.62
GSMUA_Achr8P05470_001	Banana	plastid	50.55	55.71
KRH12419	Soybean	cytosol, plastid	52.0	54.27
KRH37419	Soybean	cytosol, extracellular, nucleus, plastid	51.45	53.6
KRH02687	Soybean	plastid	51.64	53.58
GSMUA_Achr3P25890_001	Banana	mitochondrion	49.82	52.9
GSMUA_Achr4P08700_001	Banana	extracellular, nucleus, plastid, vacuole	51.27	52.61
Zm00001d036000_P001	Maize	cytosol	13.45	52.48
Zm00001d009755_P001	Maize	plastid	41.27	50.9
Bra002773.1-P	Field mustard	cytosol	46.73	50.69
TraesCS3B01G238500.1	Wheat	cytosol, plastid	49.82	50.65
Zm00001d042156_P001	Maize	mitochondrion	17.27	50.0
TraesCS3A01G206400.1	Wheat	plastid	49.64	49.1
TraesCS3D01G209200.2	Wheat	plastid	49.27	49.09
HORVU3Hr1G049640.1	Barley	plastid	48.36	48.28
Os01t0570800-01	Rice	plastid	49.82	48.15
Bra021491.1-P	Field mustard	nucleus	42.18	47.06
Solyc08g062930.1.1	Tomato	cytosol	33.09	46.67
EES03151	Sorghum	mitochondrion, plastid	48.55	46.35
Zm00001d044253_P001	Maize	plastid	47.27	46.26
Bra035643.1-P	Field mustard	cytosol	46.36	45.21
EES18807	Sorghum	plastid	44.91	42.96
Zm00001d011228_P001	Maize	plastid	42.18	42.18
Bra027414.1-P	Field mustard	nucleus	42.73	40.8
Bra014570.1-P	Field mustard	nucleus	41.09	40.14
Bra019642.1-P	Field mustard	cytosol	33.09	39.91
Bra028537.1-P	Field mustard	cytosol	32.91	39.69
Bra001512.1-P	Field mustard	cytosol	36.73	38.19
GSMUA_Achr3P32310_001	Banana	endoplasmic reticulum	50.0	30.52

Protein Annotations

EnsemblPlants:Bra034546.1	EnsemblPlants:Bra034546.1-P	EnsemblPlantsGene:Bra034546	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR31250	PANTHER:PTHR31250:SF1	PFAM:PF00612	SEG:seg
SMART:SM00015	UniParc:UPI0002546947	UniProt:M4F0F2	MapMan:35.1	:	:

Description

AT4G33050 (E=4e-198) EDA39 | EDA39 (embryo sac development arrest 39); calmodulin binding

Coordinates

chrA08:+:12889449..12892033

Molecular Weight (calculated)

62522.8 Da

IEP (calculated)

8.128

GRAVY (calculated)

-0.629

Length

550 amino acids

Sequence
(BLAST)

001: MQRSLSFNSW EVPEETKTDS DVEVFETKKS TPSTLNGRNC ERIQIKKPTI TPPEPFVFFS PRPVTELDAA ATTVQKVYKS YRTRRNLADC AVLVEELWQK
101: SLDAAAQKLS SNTEETNNDS GFKVLETKKS THNTLNGRNC ERIQIKKPTV TPPEPFVFFS PRPVTELDAA ATTLQKVYKS YRTRRNLADC AVVVEELWWK
201: TLDAATLDLS SVSFFEKEKH EPAASKWVRA RTRAAKVGKG LSKDEKAQKL ALQHWLEAID PRHRYGHNLH FYYDVWSESK SSQPFFYWLD IGDGKDVNLE
301: KHPRSVLQKQ CISYLGPMER EAYEVIVEDG RLMYKQSMDL INSTDESKSI FVLSTTRTLY VGKKKKGVFQ HSSFLSGGAT TAAGRLVARD GILEAIWPYS
401: GHYLPTEENF KEFISFLEEH NVDLTNVKRC AVNEEYSSSF KSTAEEEEEP KEVSEEVELP SEQEERARPV FDPAKRLSCK WSSGYGPRIG CVRDYPVELQ
501: AQALEQVNLS PRVSPAYSYG PIPSPRPSPR VRVSPRLAYM GIPSPRGVKC

Best Arabidopsis Sequence Match ( AT4G33050.3 )
(BLAST)

001: MGLEVGSLCF KLKDGGLTSR TNSFKRDDTN RHQNSPKSTM ERSLSFNSWE VPKETKTDSD FEVLETKKST PNTLNGRNCE RIQIKKPTVT PPEPFVFFSP
101: RPVTELDAAA TTLQKVYKSY RTRRNLADCA VVVEELWWRT LEGAALDLSS VSFFGEEKHE TAVSKWARAR KRAAKVGKGL SKDEKAQKLA LQHWLEAIDP
201: RHRYGHNLHF YYDVWSASKS TQPFFYWLDI GDGKDVNLEK HPRSVLQKQC IRYLGPMERE AYEVIVEDGR LMYKQGMTLI NSTEEAKSIF VLSTTRNLYV
301: GIKKKGLFQH SSFLSGGATT AAGRLVARDG ILEAIWPYSG HYLPTEDNFK EFISFLEEHN VDLTNVKRCS VNEEYSSFKS TADEEEERKE VSEEVEIPSE
401: KEERARPVFD PVKRLSCKWT SGYGPRIGCV RDYPMELQAQ ALEQVSLSPR VSPANSYGPI PSPRPSPKVR VSPRLAYMGI PSPRAVKC

Arabidopsis Description

EDA39calmodulin-binding family protein [Source:TAIR;Acc:AT4G33050]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.