CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, extracellular, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 3
extracellular 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH12419	Soybean	cytosol, plastid	92.99	93.17
KRH02687	Soybean	plastid	75.19	74.91
KRH19209	Soybean	cytosol	37.12	72.32
CDX75320	Canola	endoplasmic reticulum, extracellular	45.08	65.75
Bra017264.1-P	Field mustard	endoplasmic reticulum, extracellular	40.91	63.53
Zm00001d050807_P001	Maize	cytosol	16.86	62.24
CDX77035	Canola	plastid	55.87	61.59
PGSC0003DMT400021177	Potato	cytosol, mitochondrion, nucleus, plastid	57.01	61.43
CDX68935	Canola	plastid	53.41	60.13
GSMUA_Achr4P09170_001	Banana	cytosol	55.3	60.08
Bra011409.1-P	Field mustard	plastid	53.41	59.75
VIT_04s0008g01070.t01	Wine grape	cytosol, extracellular, nucleus	60.8	59.44
GSMUA_Achr8P26270_001	Banana	plastid	53.22	58.54
GSMUA_Achr8P24930_001	Banana	cytosol	42.61	58.44
GSMUA_Achr8P05470_001	Banana	plastid	54.55	57.72
GSMUA_Achr4P08700_001	Banana	extracellular, nucleus, plastid, vacuole	58.33	57.46
CDY35312	Canola	plastid	56.44	56.98
GSMUA_Achr3P25890_001	Banana	mitochondrion	55.87	56.95
Bra034295.1-P	Field mustard	plastid	56.44	56.87
AT2G26190.1	Thale cress	plastid	56.44	56.02
CDY45026	Canola	cytosol	53.6	54.95
KRH47098	Soybean	nucleus	51.52	54.51
KRH44122	Soybean	nucleus	50.57	53.4
Zm00001d036000_P001	Maize	cytosol	14.02	52.48
AT4G33050.5	Thale cress	plastid	55.11	51.96
CDY28281	Canola	cytosol, plastid	54.73	51.89
Bra034546.1-P	Field mustard	cytosol	53.6	51.45
Zm00001d042156_P001	Maize	mitochondrion	18.18	50.53
KRH23287	Soybean	cytosol	48.3	50.2
Zm00001d009755_P001	Maize	plastid	42.23	50.0
TraesCS3B01G238500.1	Wheat	cytosol, plastid	50.38	49.17
KRH10031	Soybean	cytosol	43.37	48.62
TraesCS3D01G209200.2	Wheat	plastid	50.38	48.19
Os01t0570800-01	Rice	plastid	51.7	47.98
TraesCS3A01G206400.1	Wheat	plastid	50.38	47.84
HORVU3Hr1G049640.1	Barley	plastid	49.62	47.55
Solyc08g062930.1.1	Tomato	cytosol	33.9	45.9
Zm00001d044253_P001	Maize	plastid	48.48	45.55
EES03151	Sorghum	mitochondrion, plastid	49.43	45.31
KRH30882	Soybean	cytosol	39.02	43.46
EES18807	Sorghum	plastid	46.4	42.61
KRG97321	Soybean	nucleus	44.51	42.04
KRG96176	Soybean	plastid	36.93	41.76
KRH32680	Soybean	cytosol	38.07	41.61
KRH71773	Soybean	nucleus	43.94	41.43
Zm00001d011228_P001	Maize	plastid	42.99	41.27
KRH58931	Soybean	nucleus	49.24	39.63
KRH38004	Soybean	cytosol	44.32	39.33
KRH42833	Soybean	cytosol	48.3	38.58
KRH67885	Soybean	cytosol	21.97	32.58
GSMUA_Achr3P32310_001	Banana	endoplasmic reticulum	55.49	32.52

Protein Annotations

EMBL:ACUP02005446	EnsemblPlants:KRH37419	EnsemblPlantsGene:GLYMA_09G065000	EntrezGene:100786251	PANTHER:PTHR31250	PANTHER:PTHR31250:SF25
ProteinID:KRH37419	ProteinID:KRH37419.1	SEG:seg	UniParc:UPI0002337B8E	UniProt:I1L1K1	MapMan:35.1

Description

hypothetical protein

Coordinates

chr9:+:6325890..6329990

Molecular Weight (calculated)

59292.5 Da

IEP (calculated)

9.479

GRAVY (calculated)

-0.471

Length

528 amino acids

Sequence
(BLAST)

001: MGLSLSLLSS AWEEIVRHSL FGLSLNFTFG SKDGAMILRS GSFKIRESET TSKGASTTNF SSKLTDCRPE HMVLEPNLSC IKDMEIMESK SSEQQLQHQP
101: VPVLSLPKEV VFSSPRPVSE LDAAATKLQK VYKSYRTRRN LADCAVVVEE LWWKALDFAS LKRSSVSFFD VEKHETAVSR WTRAKTRAAK VGKGLSKDDK
201: AQKLALQHWL EAIDPRHRYG HNLHMYYDTW FESQSTQPFF YWLDVGDGKE INLEKCPRTT LQRQCIKYLG PKEREEYEVI VEKGKLVYKQ DGRFVDTNGN
301: SKWIFVLSTT RSLYVGRKQK GAFQHSSFLA GAATTAAGRL VAQQGVLEAI WPYSGHYHPT EENFKEFISF LDEHKVDLSN VKKCAVDDDA PSIVGSNSFI
401: DINESQQINE GPTVSSSNNV NNNGITINAT FNKEIEKKVV ATVFDVPKRL TCKWSTGAGP RIGCVRDYPG HLQIRALEHV NLSPRPASAR PYSYGPIPSP
501: RPSPKVRMSP RLAYMGLPSP RTSIPATS

Best Arabidopsis Sequence Match ( AT4G33050.5 )
(BLAST)

001: MLRSLSHHYI HIPSSVLSPK NKNHSFILYS FKLLCFLSKQ TPRNVCFVFD THTRGFSILN ILWNYPFVIL VVMGLEVGSL CFKLKDGGLT SRTNSFKRDD
101: TNRHQNSPKS TMERSLSFNS WEVPKETKTD SDFEVLETKK STPNTLNGRN CERIQIKKPT VTPPEPFVFF SPRPVTELDA AATTLQKVYK SYRTRRNLAD
201: CAVVVEELWW RTLEGAALDL SSVSFFGEEK HETAVSKWAR ARKRAAKVGK GLSKDEKAQK LALQHWLEAI DPRHRYGHNL HFYYDVWSAS KSTQPFFYWL
301: DIGDGKDVNL EKHPRSVLQK QCIRYLGPME REAYEVIVED GRLMYKQGMT LINSTEEAKS IFVLSTTRNL YVGIKKKGLF QHSSFLSGGA TTAAGRLVAR
401: DGILEAIWPY SGHYLPTEDN FKEFISFLEE HNVDLTNVKR CSVNEEYSSF KSTADEEEER KEVSEEVEIP SEKEERARPV FDPVKRLSCK WTSGYGPRIG
501: CVRDYPMELQ AQALEQVSLS PRVSPANSYG PIPSPRPSPK VRVSPRLAYM GIPSPRAVKC

Arabidopsis Description

EDA39calmodulin-binding family protein [Source:TAIR;Acc:AT4G33050]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.