Factsheet for GSMUA_Achr8P05470_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 7
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr11P...
GSMUA_Achr2P01120_001
GSMUA_Achr3P09330_001
GSMUA_Achr3P25040_001
GSMUA_Achr5P07820_001
GSMUA_Achr5P27590_001
GSMUA_Achr6P15990_001
GSMUA_Achr6P23670_001
GSMUA_Achr8P05790_001
GSMUA_Achr9P17280_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G57010.1	GSMUA_Achr10P...	AT5G21274.1	21798944
AT5G57010.1	GSMUA_Achr10P...	AT5G21274.1	21798944
AT5G57010.1	GSMUA_Achr10P...	AT5G21274.1	21798944
AT5G57010.1	GSMUA_Achr10P...	AT5G21274.1	21798944
AT5G57010.1	GSMUA_Achr11P...	AT5G21274.1	21798944
AT5G57010.1	GSMUA_Achr2P01120_001	AT5G21274.1	21798944
AT5G57010.1	GSMUA_Achr3P09330_001	AT5G21274.1	21798944
AT5G57010.1	GSMUA_Achr3P25040_001	AT5G21274.1	21798944
AT5G57010.1	GSMUA_Achr5P07820_001	AT5G21274.1	21798944
AT5G57010.1	GSMUA_Achr5P27590_001	AT5G21274.1	21798944
AT5G57010.1	GSMUA_Achr6P15990_001	AT5G21274.1	21798944
AT5G57010.1	GSMUA_Achr6P23670_001	AT5G21274.1	21798944
AT5G57010.1	GSMUA_Achr8P05790_001	AT5G21274.1	21798944
AT5G57010.1	GSMUA_Achr9P17280_001	AT5G21274.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P25890_001	Banana	mitochondrion	72.95	70.27
GSMUA_Achr8P26270_001	Banana	plastid	61.52	63.96
CDX75320	Canola	endoplasmic reticulum, extracellular	46.29	63.81
Zm00001d050807_P001	Maize	cytosol	18.24	63.64
VIT_09s0002g04560.t01	Wine grape	cytosol	40.08	63.29
Solyc03g121770.1.1	Tomato	cytosol	33.27	62.17
GSMUA_Achr4P09170_001	Banana	cytosol	59.92	61.52
Bra017264.1-P	Field mustard	endoplasmic reticulum, extracellular	41.88	61.47
CDX68935	Canola	plastid	56.11	59.7
Bra011409.1-P	Field mustard	plastid	56.31	59.53
CDX77035	Canola	plastid	56.11	58.46
GSMUA_Achr4P08700_001	Banana	extracellular, nucleus, plastid, vacuole	61.12	56.9
GSMUA_Achr8P24930_001	Banana	cytosol	43.49	56.36
KRH02687	Soybean	plastid	58.52	55.09
CDY35312	Canola	plastid	57.72	55.07
Bra034295.1-P	Field mustard	plastid	57.72	54.96
AT2G26190.1	Thale cress	plastid	58.52	54.89
VIT_04s0008g01070.t01	Wine grape	cytosol, extracellular, nucleus	59.32	54.81
Zm00001d036000_P001	Maize	cytosol	15.43	54.61
VIT_11s0016g01970.t01	Wine grape	cytosol	58.52	54.58
KRH37419	Soybean	cytosol, extracellular, nucleus, plastid	57.72	54.55
KRH12419	Soybean	cytosol, plastid	57.52	54.46
GSMUA_Achr7P09200_001	Banana	cytosol, extracellular, nucleus, plastid	55.51	54.31
CDY45026	Canola	cytosol	55.71	53.98
GSMUA_Achr6P04920_001	Banana	endoplasmic reticulum, vacuole	55.31	53.38
AT5G57010.1	Thale cress	cytosol	52.91	53.33
KRH19209	Soybean	cytosol	28.66	52.77
GSMUA_Achr6P05460_001	Banana	cytosol	56.31	51.65
Zm00001d042156_P001	Maize	mitochondrion	19.64	51.58
Zm00001d009755_P001	Maize	plastid	46.09	51.57
CDY28281	Canola	cytosol, plastid	57.11	51.17
Bra002773.1-P	Field mustard	cytosol	51.7	50.89
KRH44122	Soybean	nucleus	50.9	50.8
GSMUA_Achr10P...	Banana	endoplasmic reticulum	52.51	50.68
Bra034546.1-P	Field mustard	cytosol	55.71	50.55
AT4G33050.5	Thale cress	plastid	56.71	50.54
PGSC0003DMT400006372	Potato	endoplasmic reticulum, extracellular, golgi	30.86	50.33
KRH47098	Soybean	nucleus	50.1	50.1
TraesCS3B01G238500.1	Wheat	cytosol, plastid	54.31	50.09
TraesCS3D01G209200.2	Wheat	plastid	53.91	48.73
Os01t0570800-01	Rice	plastid	55.31	48.51
HORVU3Hr1G049640.1	Barley	plastid	53.31	48.28
TraesCS3A01G206400.1	Wheat	plastid	53.71	48.2
GSMUA_Achr6P01520_001	Banana	cytosol	22.85	48.1
KRH23287	Soybean	cytosol	48.3	47.44
Zm00001d044253_P001	Maize	plastid	53.31	47.33
GSMUA_Achr3P03060_001	Banana	cytosol	35.27	46.07
Bra035643.1-P	Field mustard	cytosol	51.9	45.92
EES03151	Sorghum	mitochondrion, plastid	52.91	45.83
KRH10031	Soybean	cytosol	42.89	45.44
GSMUA_Achr4P06580_001	Banana	cytosol	48.1	44.36
GSMUA_Achr4P13570_001	Banana	cytosol	47.49	43.57
EES18807	Sorghum	plastid	50.1	43.48
GSMUA_Achr9P21650_001	Banana	plastid, vacuole	47.49	41.73
Zm00001d011228_P001	Maize	plastid	45.49	41.27
GSMUA_Achr4P11190_001	Banana	cytosol	47.7	40.61
GSMUA_Achr6P13300_001	Banana	cytosol	40.08	40.4
GSMUA_Achr6P01560_001	Banana	mitochondrion	21.24	39.7
GSMUA_Achr3P29200_001	Banana	cytosol	46.69	36.41
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plastid	39.28	35.0
GSMUA_Achr3P32310_001	Banana	endoplasmic reticulum	59.32	32.85
GSMUA_Achr6P01510_001	Banana	nucleus	13.03	31.4
VIT_09s0002g01680.t01	Wine grape	plastid	59.72	29.56

Protein Annotations

EnsemblPlants:GSMUA_Achr8P05470_001	EnsemblPlants:GSMUA_Achr8T05470_001	EnsemblPlantsGene:GSMUA_Achr8G05470_001	PANTHER:PTHR31250	PANTHER:PTHR31250:SF1	SEG:seg
UniParc:UPI000294F958	UniProt:M0TMV0	MapMan:35.1	:	:	:

Description

calmodulin-binding protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr8G05470_001]

Coordinates

chr8:-:3574485..3576864

Molecular Weight (calculated)

55775.9 Da

IEP (calculated)

10.189

GRAVY (calculated)

-0.404

Length

499 amino acids

Sequence
(BLAST)

001: MGLSFSVPLW NWFAAAGSIS LGEKKANRIL RSLSFGRSNS SNRMVSGACD DAVTERSLSF RNWEPETPKL DASVPIGEQA ADDDDVTLQP SCLKVPMNFA
101: VPHVKLPQQL VELSSPRPSS ELDAAATKLQ KVYKSYRTRR NLADCAVVVE ELWWKALDFA SLKRSSILFF DVEKPEPAVS KWARAKRRAA RVGKGLSKDE
201: KAQKLALQHW LEAIDPRHRY GHNLHLYYDV WSGSESTQPF FYWLDVGDGR EVNLERCPRS KLQKQCISYL GPKEREAYEV IVENGKLVYK QSGMPVNTTE
301: SCKWIFVLST SRALYVGKKN KGTFQHSSFL AGGATTAAGR LVAKEGRIEA IWPYSGHYLP TEDNFREFIS FLGDNHVDLT NVKVNPSSSL ISAPSMTMSS
401: LHTRRMTMLR SQSKRRLSCR WTTGAGPRIG CVRDYPADLQ SKALEQVNLS PRVVASPAAN KVPVPIPSPR PSPRLRLSPR LQYMGIPTPP IVSLTLPKP

Best Arabidopsis Sequence Match ( AT2G26190.3 )
(BLAST)

001: MGLSLSLLLS AWKEVVTTQF FSFKNPVESF LETRSFSLKL KEGGLTSRTN SFKSENPQEK SPKTGMERSL SFNSWEIVTE VETEPMNKED EEIVEPTKPA
101: RNSLNGRNCE RIQITKPTIT PPTPFVFFSP RPVTELDAAA TTLQKVYKSY RTRRNLADCA VVVEELWWKT LDAAALNLSS VAFFEEEKHE TAVSKWARAR
201: TRAAKVGKGL SKDEKAQKLA LQHWLEAIDP RHRYGHNLHF YYDVWSASMS AQPFFYWLDI GDGKDVNLEH HPRSVLQKQC IKYLGPLERE AYEVIVEDGK
301: LMNKQSMTLI NSTEDSKSIF VLSTTRTLYV GQKKKGRFQH SSFLSGGATT AAGRLVAREG ILEAIWPYSG HYLPTEDNFN EFISFLEENN VDMTNVKRCS
401: VNEEYSSFNS SGYEEEATKE EEAEKKPAET IVTEEQEEEK ERERPVFQLA KRLSCKWNSG VGPRIGCVRD YPMELQSQAF EQVSLSPRIS PGSTRFPSPY
501: GPIPSPRPSP RVRVSPRLAY MGIPSPRVQV NC

Arabidopsis Description

IQM4IQ domain-containing protein IQM4 [Source:UniProtKB/Swiss-Prot;Acc:O64851]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.