Factsheet for GSMUA_Achr6P13300_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
golgi 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P03060_001	Banana	cytosol	57.78	74.87
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plastid	73.94	65.36
EES09264	Sorghum	cytosol	54.55	59.34
CDY13341	Canola	cytosol	21.41	58.56
EES16640	Sorghum	cytosol	52.93	57.96
VIT_13s0074g00760.t01	Wine grape	nucleus	51.92	57.49
Solyc10g085610.1.1	Tomato	cytosol	50.3	57.24
KRH30882	Soybean	cytosol	54.75	57.17
AT3G52870.1	Thale cress	cytosol	52.53	57.02
Zm00001d004916_P001	Maize	cytosol	42.02	56.68
Os12t0149900-01	Rice	cytosol	54.55	56.6
Zm00001d052525_P001	Maize	cytosol	53.33	56.41
TraesCS5A01G129600.1	Wheat	cytosol	52.53	56.4
CDY13342	Canola	cytosol	51.92	56.36
CDX67541	Canola	cytosol	51.92	56.36
Solyc10g083360.1.1	Tomato	cytosol	52.93	56.22
PGSC0003DMT400072375	Potato	cytosol	52.93	56.22
Bra019642.1-P	Field mustard	cytosol	51.72	56.14
Bra028537.1-P	Field mustard	cytosol	51.72	56.14
CDX76252	Canola	cytosol	51.72	56.14
CDX95381	Canola	cytosol	51.52	55.92
KRH32680	Soybean	cytosol	54.34	55.69
TraesCS5D01G137100.1	Wheat	cytosol	53.54	55.21
TraesCS5B01G128200.1	Wheat	cytosol	53.54	55.21
TraesCS6D01G097300.1	Wheat	cytosol	53.94	55.17
HORVU6Hr1G019510.4	Barley	cytosol	53.13	55.02
TraesCS6B01G137500.1	Wheat	cytosol	53.33	54.66
HORVU5Hr1G041930.15	Barley	cytosol	53.33	54.66
TraesCS6A01G108900.1	Wheat	cytosol	52.93	54.02
KRG96176	Soybean	plastid	50.91	53.96
Zm00001d035377_P001	Maize	cytosol	46.87	53.21
VIT_08s0007g03630.t01	Wine grape	cytosol	50.1	52.99
Os11t0151002-00	Rice	cytosol	49.9	52.11
EES09263	Sorghum	cytosol	47.68	51.98
TraesCS6D01G093400.1	Wheat	cytosol	50.1	51.67
TraesCS6B01G133900.1	Wheat	cytosol	49.09	50.94
PGSC0003DMT400022916	Potato	cytosol	51.92	49.42
Solyc09g009770.2.1	Tomato	nucleus	51.52	48.57
GSMUA_Achr8P24930_001	Banana	cytosol	34.55	44.42
TraesCS6A01G104600.1	Wheat	nucleus	24.04	43.75
GSMUA_Achr4P09170_001	Banana	cytosol	42.22	43.0
GSMUA_Achr8P26270_001	Banana	plastid	41.21	42.5
KRH67885	Soybean	cytosol	29.49	41.01
GSMUA_Achr4P13570_001	Banana	cytosol	44.24	40.26
GSMUA_Achr4P06580_001	Banana	cytosol	43.84	40.11
GSMUA_Achr8P05470_001	Banana	plastid	40.4	40.08
GSMUA_Achr7P09200_001	Banana	cytosol, extracellular, nucleus, plastid	40.4	39.22
GSMUA_Achr6P01520_001	Banana	cytosol	18.59	38.82
GSMUA_Achr3P25890_001	Banana	mitochondrion	40.2	38.42
GSMUA_Achr4P08700_001	Banana	extracellular, nucleus, plastid, vacuole	41.41	38.25
GSMUA_Achr6P04920_001	Banana	endoplasmic reticulum, vacuole	39.8	38.1
GSMUA_Achr9P21650_001	Banana	plastid, vacuole	42.83	37.32
GSMUA_Achr10P...	Banana	endoplasmic reticulum	38.79	37.14
GSMUA_Achr6P05460_001	Banana	cytosol	40.61	36.95
GSMUA_Achr4P11190_001	Banana	cytosol	40.4	34.13
GSMUA_Achr6P01560_001	Banana	mitochondrion	17.78	32.96
GSMUA_Achr6P01510_001	Banana	nucleus	13.54	32.37
GSMUA_Achr3P29200_001	Banana	cytosol	40.61	31.41
GSMUA_Achr3P32310_001	Banana	endoplasmic reticulum	41.21	22.64

Protein Annotations

EnsemblPlants:GSMUA_Achr6P13300_001	EnsemblPlants:GSMUA_Achr6T13300_001	EnsemblPlantsGene:GSMUA_Achr6G13300_001	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR31250	PANTHER:PTHR31250:SF10	PFscan:PS50096	SEG:seg
UniParc:UPI000296F1EA	UniProt:M0T6M8	MapMan:35.1	:	:	:

Description

calmodulin-binding protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr6G13300_001]

Coordinates

chr6:+:8884837..8889887

Molecular Weight (calculated)

54980.3 Da

IEP (calculated)

9.277

GRAVY (calculated)

-0.489

Length

495 amino acids

Sequence
(BLAST)

001: MKVEAVALIR SSFDHPPPPA FPLAAEAPPS PGEPRSAFPG PREGVGLETG GDRSLFPRDP GVAASGDGSA PSPDPPESMA ATKVQKVYRS YRTRRRLADS
101: AVVAEELWWQ AIDFARLSHS TVSFFDHMKH ESAISRWNRV CLNASKAGSL VGQGLSKDEK ALKLAFLHWI EAIDPRHRYG HNLHFYYEEW CKSEAGQPFF
201: YWLDIGDGRD LDLIDCPRSL LRKQCVKYLG PQEREHYEYV PIDGKIIHKL SGMLLDTTSG TKETKWIFVI STSGRLYAGQ KKKGIFHHSS FLAGGATRAA
301: GRLTAENGIL KCVWAYSGHY RPTEENFNNF LDFLRENGIN LDNTQILSSS NEDYYDGPKK SQLEKVIDAM KVSKTPWLAL PEVLKNTTGE PSVPTQAARG
401: QAEYKRSLSG GLQSPKADVP KKAILERINS KRKASSYQLG DQLSSKWCSG AGPRIGCVAD YPLEVRIQAL EFVNLSPRMI SPSTSKPLPR MHSAF

Best Arabidopsis Sequence Match ( AT3G52870.1 )
(BLAST)

001: MQVVSSFDFQ SSPFSHGAGE ILISPVDHRE LSSHGDALEG ACDDSTRLAA VKVQKVYRSY RTRRRLADSV VVAEELWWQA MDYARLNHST ISFFDYSRPE
101: TAVSRWNRVS LNASKVGKGL SIVDKAQKLA FQHWIEAIDP RHRYGHNLHK YYEEWCKADA GQPFFYWLDV GGGIDLDLNE CPRSKLKQQC IRYLGPQERE
201: EYEYVIIEGK IVHKLTGKFL HTMHGSEGTK WIFVMSTFKK LYAGLKKKGR FHHSSFLAGG ATLAAGRVIV DNGVLKTISA YSGHYRPSDD SLDTFLGFLR
301: ENAVNLDNVE VHKASEDSDS YDDYVKSNGG SEPEPLKKED TTFQAETETD ENGNGTVGTL EEAKRSSYQR TLSGGLGSPK ANVPQKSMLL RINSKKQSRS
401: LQLGHQLSLK WSTGVGPRIG CAADYPVQLR TQALEFVNLS PKYRSSRLSP TGKLDV

Arabidopsis Description

IQM3IQ domain-containing protein IQM3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFA4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.