Factsheet for Zm00001d035377_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES09263	Sorghum	cytosol	85.09	81.72
Zm00001d004916_P001	Maize	cytosol	54.36	64.58
Zm00001d052525_P001	Maize	cytosol	67.66	63.03
Os11t0151002-00	Rice	cytosol	65.83	60.55
GSMUA_Achr3P03060_001	Banana	cytosol	46.1	52.62
CDX67541	Canola	cytosol	53.9	51.54
CDY13342	Canola	cytosol	53.9	51.54
Bra028537.1-P	Field mustard	cytosol	53.67	51.32
AT3G52870.1	Thale cress	cytosol	53.21	50.88
VIT_13s0074g00760.t01	Wine grape	nucleus	52.06	50.78
KRH30882	Soybean	cytosol	54.13	49.79
Solyc10g083360.1.1	Tomato	cytosol	53.21	49.79
CDX95381	Canola	cytosol	52.06	49.78
Bra019642.1-P	Field mustard	cytosol	51.83	49.56
CDX76252	Canola	cytosol	51.83	49.56
PGSC0003DMT400072375	Potato	cytosol	52.75	49.36
Solyc10g085610.1.1	Tomato	cytosol	49.08	49.2
CDY13341	Canola	cytosol	20.41	49.17
VIT_08s0007g03630.t01	Wine grape	cytosol	52.52	48.93
KRH32680	Soybean	cytosol	54.13	48.86
KRG96176	Soybean	plastid	51.38	47.97
GSMUA_Achr6P13300_001	Banana	cytosol	53.21	46.87
Zm00001d050807_P001	Maize	cytosol	14.68	44.76
PGSC0003DMT400022916	Potato	cytosol	52.98	44.42
Solyc09g009770.2.1	Tomato	nucleus	52.52	43.62
Zm00001d036000_P001	Maize	cytosol	13.3	41.13
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plastid	52.06	40.54
KRH67885	Soybean	cytosol	31.88	39.04
Zm00001d042156_P001	Maize	mitochondrion	16.05	36.84
Zm00001d009755_P001	Maize	plastid	37.16	36.32
Zm00001d047402_P001	Maize	cytosol	43.12	34.94
Zm00001d037759_P002	Maize	mitochondrion	40.37	31.77
Zm00001d044253_P001	Maize	plastid	39.22	30.43
Zm00001d032981_P001	Maize	cytosol	44.04	29.27
Zm00001d022245_P001	Maize	cytosol	44.27	29.2
Zm00001d027815_P002	Maize	nucleus	42.89	29.13
Zm00001d011228_P001	Maize	plastid	33.03	26.18
Zm00001d024699_P001	Maize	nucleus	17.89	24.68

Protein Annotations

EMBL:BT040230	EnsemblPlants:Zm00001d035377_P001	EnsemblPlants:Zm00001d035377_T001	EnsemblPlantsGene:Zm00001d035377	EntrezGene:100273114	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR31250	PANTHER:PTHR31250:SF10
PFscan:PS50096	ProteinID:AQK78923.1	SEG:seg	UniParc:UPI00017B7DA8	UniProt:B4FSZ2	MapMan:35.1

Description

IQ domain-containing protein IQM3

Coordinates

chr6:+:23680168..23690640

Molecular Weight (calculated)

49038.4 Da

IEP (calculated)

9.528

GRAVY (calculated)

-0.593

Length

436 amino acids

Sequence
(BLAST)

001: MEAAAAGSGG SGAATKLQKV YRSYRTRRRL ADSAVVVEEL WWQALDFARL NYNTISFFDE PKPKAAASHW NRIGQNALKV GHGLSREPKA LKLAFEHWIE
101: AIDSRHRSGH NLHFYYNLWC QSQAGQPFFY WLDVGDGKEV DLPECPRTLL KKQCIRYLGP KERELYEYII NEGKVIHKQS GEPLDTSKGP KDAYWIFVMS
201: TARRLYAGKK EKGVFQHSSF LSGGATIAAG KFTVKAGVIK SIWAYSGHYK PSTEDLNNFM KFLEENGVNL KEIEMRPFKK GDYHNDSMPN ETQNIIVGTN
301: PPQLILSSDT KEGDEGKDAP IERAKVTYHR TLSGGLHNPK GTDVPQKAIL ERIKSKSETE SYQLGLKLSL KWSTGAGPRI GCVKDYPTKL RMQALEMVHL
401: LTGASTIPHS SLLAEAQECH DPDRRLEDLV KRAQAN

Best Arabidopsis Sequence Match ( AT3G52870.1 )
(BLAST)

001: MQVVSSFDFQ SSPFSHGAGE ILISPVDHRE LSSHGDALEG ACDDSTRLAA VKVQKVYRSY RTRRRLADSV VVAEELWWQA MDYARLNHST ISFFDYSRPE
101: TAVSRWNRVS LNASKVGKGL SIVDKAQKLA FQHWIEAIDP RHRYGHNLHK YYEEWCKADA GQPFFYWLDV GGGIDLDLNE CPRSKLKQQC IRYLGPQERE
201: EYEYVIIEGK IVHKLTGKFL HTMHGSEGTK WIFVMSTFKK LYAGLKKKGR FHHSSFLAGG ATLAAGRVIV DNGVLKTISA YSGHYRPSDD SLDTFLGFLR
301: ENAVNLDNVE VHKASEDSDS YDDYVKSNGG SEPEPLKKED TTFQAETETD ENGNGTVGTL EEAKRSSYQR TLSGGLGSPK ANVPQKSMLL RINSKKQSRS
401: LQLGHQLSLK WSTGVGPRIG CAADYPVQLR TQALEFVNLS PKYRSSRLSP TGKLDV

Arabidopsis Description

IQM3IQ domain-containing protein IQM3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFA4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.