CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG96176	Soybean	plastid	60.11	45.82
KRH32680	Soybean	cytosol	54.21	39.96
KRH30882	Soybean	cytosol	53.09	39.87
PGSC0003DMT400072375	Potato	cytosol	48.88	37.34
Bra028537.1-P	Field mustard	cytosol	47.47	37.06
CDX67541	Canola	cytosol	47.47	37.06
CDY13342	Canola	cytosol	47.47	37.06
Solyc10g083360.1.1	Tomato	cytosol	48.31	36.91
CDX95381	Canola	cytosol	46.35	36.18
AT3G52870.1	Thale cress	cytosol	46.35	36.18
Solyc10g085610.1.1	Tomato	cytosol	43.82	35.86
Bra019642.1-P	Field mustard	cytosol	45.79	35.75
CDX76252	Canola	cytosol	45.79	35.75
TraesCS5A01G129600.1	Wheat	cytosol	44.94	34.71
EES09264	Sorghum	cytosol	44.1	34.51
TraesCS6D01G097300.1	Wheat	cytosol	46.63	34.3
TraesCS5D01G137100.1	Wheat	cytosol	46.07	34.17
TraesCS5B01G128200.1	Wheat	cytosol	45.79	33.96
VIT_08s0007g03630.t01	Wine grape	cytosol	44.38	33.76
HORVU6Hr1G019510.4	Barley	cytosol	45.22	33.68
HORVU5Hr1G041930.15	Barley	cytosol	45.51	33.54
TraesCS6B01G137500.1	Wheat	cytosol	45.51	33.54
TraesCS6A01G104600.1	Wheat	nucleus	25.56	33.46
TraesCS6A01G108900.1	Wheat	cytosol	45.22	33.2
Zm00001d052525_P001	Maize	cytosol	43.54	33.12
Os12t0149900-01	Rice	cytosol	44.1	32.91
EES16640	Sorghum	cytosol	41.57	32.74
EES09263	Sorghum	cytosol	41.57	32.6
TraesCS6D01G093400.1	Wheat	cytosol	43.82	32.5
PGSC0003DMT400022916	Potato	cytosol	47.19	32.31
Zm00001d035377_P001	Maize	cytosol	39.04	31.88
TraesCS6B01G133900.1	Wheat	cytosol	42.7	31.87
Os11t0151002-00	Rice	cytosol	42.42	31.86
Solyc09g009770.2.1	Tomato	nucleus	46.63	31.62
GSMUA_Achr3P03060_001	Banana	cytosol	32.3	30.1
Zm00001d004916_P001	Maize	cytosol	30.9	29.97
CDY13341	Canola	cytosol	15.17	29.83
GSMUA_Achr6P13300_001	Banana	cytosol	41.01	29.49
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plastid	42.13	26.79
KRH19209	Soybean	cytosol	17.42	22.88
KRH71773	Soybean	nucleus	34.83	22.14
KRH37419	Soybean	cytosol, extracellular, nucleus, plastid	32.58	21.97
KRG97321	Soybean	nucleus	34.27	21.82
KRH02687	Soybean	plastid	32.02	21.51
KRH12419	Soybean	cytosol, plastid	31.74	21.44
KRH47098	Soybean	nucleus	29.78	21.24
KRH44122	Soybean	nucleus	29.78	21.2
KRH38004	Soybean	cytosol	34.55	20.67
KRH10031	Soybean	cytosol	26.4	19.96
KRH23287	Soybean	cytosol	28.37	19.88
KRH58931	Soybean	nucleus	36.24	19.66
KRH42833	Soybean	cytosol	35.67	19.21

Protein Annotations

EMBL:ACUP02002086	EnsemblPlants:KRH67885	EnsemblPlantsGene:GLYMA_03G193200	PANTHER:PTHR31250	PANTHER:PTHR31250:SF23	ProteinID:KRH67885
ProteinID:KRH67885.1	UniParc:UPI0006ED8691	UniProt:A0A0R0KL98	MapMan:35.1	:	:

Description

hypothetical protein

Coordinates

chr3:+:40407249..40410953

Molecular Weight (calculated)

40445.6 Da

IEP (calculated)

9.328

GRAVY (calculated)

-0.344

Length

356 amino acids

Sequence
(BLAST)

001: MEVETHSLSP TFELIHLLSQ STTDTYFPPN NAANQPSLGH ATAVLKLQKV YRTRLAGWPT PPLLPRRWQA IDYVRVNHST ISFFNLPETA ASCWSRVKLN
101: AAKVGKGLSK DAIAQKCWLS SIGSKLLIHD IAMDITYNTT IKNGVKQMLA SRFFLLQERE QYEYIVREDK IINKQYGDLF HTNEDSEDAK WIFVMSTSKK
201: LYAGKLLEGW WQRMKFLSGH YRPTDDTLDS FLSYLKENGV KLDEVELHKA NEDSDIYEES NVIEKQQPLK CQALVKCGLQ SPRAVVPKTA ILQRINSKKA
301: SKSYQLGHQL SLKWSTGAGP RIGCVADYPI ELRTQAYPFF IHANGRPCIA FSLSIL

Best Arabidopsis Sequence Match ( AT3G52870.1 )
(BLAST)

001: MQVVSSFDFQ SSPFSHGAGE ILISPVDHRE LSSHGDALEG ACDDSTRLAA VKVQKVYRSY RTRRRLADSV VVAEELWWQA MDYARLNHST ISFFDYSRPE
101: TAVSRWNRVS LNASKVGKGL SIVDKAQKLA FQHWIEAIDP RHRYGHNLHK YYEEWCKADA GQPFFYWLDV GGGIDLDLNE CPRSKLKQQC IRYLGPQERE
201: EYEYVIIEGK IVHKLTGKFL HTMHGSEGTK WIFVMSTFKK LYAGLKKKGR FHHSSFLAGG ATLAAGRVIV DNGVLKTISA YSGHYRPSDD SLDTFLGFLR
301: ENAVNLDNVE VHKASEDSDS YDDYVKSNGG SEPEPLKKED TTFQAETETD ENGNGTVGTL EEAKRSSYQR TLSGGLGSPK ANVPQKSMLL RINSKKQSRS
401: LQLGHQLSLK WSTGVGPRIG CAADYPVQLR TQALEFVNLS PKYRSSRLSP TGKLDV

Arabidopsis Description

IQM3IQ domain-containing protein IQM3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFA4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.