CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES09264	Sorghum	cytosol	86.28	85.71
Os12t0149900-01	Rice	cytosol	80.75	76.52
TraesCS5B01G128200.1	Wheat	cytosol	78.98	74.38
TraesCS5D01G137100.1	Wheat	cytosol	78.54	73.96
HORVU6Hr1G019510.4	Barley	cytosol	77.88	73.64
TraesCS6D01G097300.1	Wheat	cytosol	78.54	73.35
TraesCS5A01G129600.1	Wheat	cytosol	74.78	73.32
TraesCS6A01G108900.1	Wheat	cytosol	78.54	73.2
TraesCS6B01G137500.1	Wheat	cytosol	77.88	72.88
HORVU5Hr1G041930.15	Barley	cytosol	77.43	72.46
TraesCS6D01G093400.1	Wheat	cytosol	72.35	68.12
TraesCS6B01G133900.1	Wheat	cytosol	71.46	67.71
TraesCS6A01G104600.1	Wheat	nucleus	40.27	66.91
EES09263	Sorghum	cytosol	66.81	66.52
GSMUA_Achr3P03060_001	Banana	cytosol	48.01	56.81
VIT_13s0074g00760.t01	Wine grape	nucleus	55.53	56.15
CDY13342	Canola	cytosol	56.64	56.14
CDX67541	Canola	cytosol	56.64	56.14
Bra028537.1-P	Field mustard	cytosol	56.42	55.92
AT3G52870.1	Thale cress	cytosol	55.75	55.26
Bra019642.1-P	Field mustard	cytosol	55.09	54.61
CDX76252	Canola	cytosol	55.09	54.61
CDX95381	Canola	cytosol	54.87	54.39
KRH30882	Soybean	cytosol	56.86	54.22
CDY13341	Canola	cytosol	21.68	54.14
GSMUA_Achr6P13300_001	Banana	cytosol	57.96	52.93
KRG96176	Soybean	plastid	54.65	52.89
PGSC0003DMT400072375	Potato	cytosol	53.98	52.36
Solyc10g083360.1.1	Tomato	cytosol	53.98	52.36
Solyc10g085610.1.1	Tomato	cytosol	50.22	52.18
KRH32680	Soybean	cytosol	55.75	52.17
VIT_08s0007g03630.t01	Wine grape	cytosol	50.0	48.29
PGSC0003DMT400022916	Potato	cytosol	54.2	47.12
Solyc09g009770.2.1	Tomato	nucleus	53.98	46.48
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plastid	55.09	44.46
KRH67885	Soybean	cytosol	32.74	41.57
EER92212	Sorghum	cytosol	47.35	37.28
KXG21506	Sorghum	cytosol	43.14	35.01
EER97603	Sorghum	nucleus	47.12	33.65
EES03151	Sorghum	mitochondrion, plastid	41.81	32.81
KXG40105	Sorghum	cytosol	44.91	31.87
EER94258	Sorghum	cytosol	47.35	31.85
EES18807	Sorghum	plastid	40.27	31.65

Protein Annotations

EnsemblPlants:EES16640	EnsemblPlantsGene:SORBI_3008G035900	EntrezGene:8066962	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR31250	PANTHER:PTHR31250:SF10	PFscan:PS50096	ProteinID:EES16640
ProteinID:EES16640.1	RefSeq:XP_002442802.1	SEG:seg	UniParc:UPI0001A88538	UniProt:C5YRR1	MapMan:35.1

Description

hypothetical protein

Coordinates

chr8:-:3319911..3324037

Molecular Weight (calculated)

50577.8 Da

IEP (calculated)

8.188

GRAVY (calculated)

-0.579

Length

452 amino acids

Sequence
(BLAST)

001: MEEVQMDRLE SMEGTGAGGE NGAATKLQKV YRSYRTRRKL ADSAVVVEEL WWQALDFARL SHSTVSFFDE PKPETAASRW NRVGLNASKV GQGLSRDGKA
101: LKLAFQHWIE AIDPRHRYGH NLQFYYDIWC QSQAGQPFFY WLDVGEGKDI DLPECPRALL KKQCIRYLGP QEREHYEYII NDGKIFHKQS GEPLDTSRGP
201: KGTKWIFVMS TAKRLYAGKK ERGVFQHSSF LAGGTTIAAG RFTAENGVIK SIWAYSGHYK PTAENLSNFM NFLEENGVDL KDVEVRSSTK EDYNEDPVPN
301: DSENFTSAII QPNFPQVVLP LNITEGDEAE NAPAEQAKSY QRTLSGGLQS PKATDIPQKA IFERMKSKGE SKSYQLGHRL SLKWSTGVGP RIGCVKDYPM
401: ELRMQALEMV DLSPRASTLS ASRRLPSCLS PTTATSPTSL LAPMQASLAQ PS

Best Arabidopsis Sequence Match ( AT3G52870.1 )
(BLAST)

001: MQVVSSFDFQ SSPFSHGAGE ILISPVDHRE LSSHGDALEG ACDDSTRLAA VKVQKVYRSY RTRRRLADSV VVAEELWWQA MDYARLNHST ISFFDYSRPE
101: TAVSRWNRVS LNASKVGKGL SIVDKAQKLA FQHWIEAIDP RHRYGHNLHK YYEEWCKADA GQPFFYWLDV GGGIDLDLNE CPRSKLKQQC IRYLGPQERE
201: EYEYVIIEGK IVHKLTGKFL HTMHGSEGTK WIFVMSTFKK LYAGLKKKGR FHHSSFLAGG ATLAAGRVIV DNGVLKTISA YSGHYRPSDD SLDTFLGFLR
301: ENAVNLDNVE VHKASEDSDS YDDYVKSNGG SEPEPLKKED TTFQAETETD ENGNGTVGTL EEAKRSSYQR TLSGGLGSPK ANVPQKSMLL RINSKKQSRS
401: LQLGHQLSLK WSTGVGPRIG CAADYPVQLR TQALEFVNLS PKYRSSRLSP TGKLDV

Arabidopsis Description

IQM3IQ domain-containing protein IQM3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFA4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.