CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d027815_P002	Maize	nucleus	89.95	89.25
Os03t0167200-01	Rice	plasma membrane	71.9	75.08
HORVU4Hr1G074550.4	Barley	cytosol	70.96	73.86
TraesCS4A01G021000.1	Wheat	nucleus	69.86	72.95
TraesCS4D01G281600.1	Wheat	nucleus	70.17	72.92
HORVU4Hr1G074540.1	Barley	cytosol	26.84	68.13
TraesCS4B01G282600.2	Wheat	nucleus	69.7	66.37
HORVU7Hr1G052820.45	Barley	cytosol	25.12	64.78
HORVU5Hr1G023670.50	Barley	cytosol	25.12	64.78
HORVU4Hr1G052500.37	Barley	cytosol, nucleus	24.8	63.97
EER94258	Sorghum	cytosol	58.08	55.06
EER92212	Sorghum	cytosol	48.04	53.31
VIT_08s0007g07190.t01	Wine grape	cytosol	43.64	52.16
Bra021491.1-P	Field mustard	nucleus	39.87	51.52
Bra027414.1-P	Field mustard	nucleus	43.33	47.92
KRH71773	Soybean	nucleus	40.97	46.61
EER97603	Sorghum	nucleus	46.0	46.29
EES09264	Sorghum	cytosol	32.81	45.93
AT3G13600.1	Thale cress	nucleus	43.33	45.62
Bra001512.1-P	Field mustard	cytosol	37.83	45.56
EES16640	Sorghum	cytosol	31.87	44.91
KRH38004	Soybean	cytosol	41.92	44.87
Bra014570.1-P	Field mustard	nucleus	39.4	44.58
Solyc01g044420.2.1	Tomato	nucleus	40.19	44.44
KRG97321	Soybean	nucleus	38.93	44.36
PGSC0003DMT400080788	Potato	nucleus	37.83	44.22
AT3G58480.1	Thale cress	nucleus	39.56	43.83
EES09263	Sorghum	cytosol	30.77	43.17
KRH58931	Soybean	nucleus	43.96	42.68
KRH42833	Soybean	cytosol	43.96	42.36
VIT_06s0004g00690.t01	Wine grape	nucleus	44.27	42.09
Solyc10g080640.1.1	Tomato	nucleus	41.76	42.02
Solyc01g005800.2.1	Tomato	nucleus	42.7	41.15
KXG21506	Sorghum	cytosol	35.79	40.93
Solyc10g078650.1.1	Tomato	nucleus	38.78	40.69
PGSC0003DMT400021529	Potato	cytosol	40.03	39.84
EES18807	Sorghum	plastid	33.75	37.39
EES03151	Sorghum	mitochondrion, plastid	33.44	36.98
PGSC0003DMT400060938	Potato	nucleus, plastid	38.46	34.95

Protein Annotations

EnsemblPlants:KXG40105	EnsemblPlantsGene:SORBI_3001G492900	PANTHER:PTHR31250	PANTHER:PTHR31250:SF5	ProteinID:KXG40105	ProteinID:KXG40105.1
ProteinID:KXG40106.1	ProteinID:KXG40107.1	SEG:seg	UniParc:UPI00081ADEB3	UniProt:A0A1B6QQA9	MapMan:35.1

Description

hypothetical protein

Coordinates

chr1:+:76211804..76218176

Molecular Weight (calculated)

70987.2 Da

IEP (calculated)

9.772

GRAVY (calculated)

-0.625

Length

637 amino acids

Sequence
(BLAST)

001: MGLSISYPPD DYLPEDDDDG MDRLFVRSLS FDNLSTLETL ESPPALLDAL TSKRLIVRGS LSFEKREGDP FQVETTLSMV SPKPAKKSYN YKPIILPRYR
101: STENLPPNSP VIGMVSPVHQ AAAIRVQKVY KSFRTRRQLA DCAVLVEQRW WKLLDFALLK RNSVSFFDVQ KPESALSRWS RARMRAAKVG KGLSKDEKAQ
201: KLALQHWLEA IDPRHRYGHN LHYYYQYWLH CESKQPFFYW LDIGEGKEVN IDDHCPRWKL LQQCIRYLGP KERESYEVVV EDGKMMYKLS NKIVDTSEGP
301: RDAKWIFVLS TTRVLYIGTK SKGTFQHSSF LAGGATSAAG RLIVENGILR AVWPHSGHYR PTEANFREFM NYLKNRNVDL TNVKLSPSEG EEDEWFRQRG
401: SLSQLKHTES SNPASEEDSS KFFQKEDSSK PRPPGAGADK DKATAKATPG TPSSTSHDKT TTTSTATSGT PAMKRSSSGS RLQRKRPPRL AVSKSRLGKG
501: SGEQGAGAFG DCLDFCKENL FLGGDGGDGE ELVVVPQEKI LHRINSKMSL HSYQLGNQLS FRWTTGAGPR IGCVRDYPPE LQFRSLEQVS LSPRGGAGPP
601: RLGTTPRQSP CAPLVPSTPG GLVSPLYGHG GAGTPAP

Best Arabidopsis Sequence Match ( AT3G58480.1 )
(BLAST)

001: METKTILRSI SFNDIDSDST ITESPEARKT LYNRSLSGKG TQRSRISPGD VENNFSIKPL TFMKEDDRYK MRIWKPVCEN EHAKEFLALL LGDGTYQAAL
101: KLQKVYRSFR TRRRLADCAV VVEQRWWKVL DFAELKRSSI SFFEIEKQET AVSRWSRART RAAKVGKGLS KDEKARKLAL QHWLEAIDPR HRYGHNLQFY
201: YHAWLHCDSK QPFFYWLDIG QGKELNHERC PRSKLYQQSI KYLGPTEREA YEVIIEDGKL MYKQSGIVLD TKEGPPDAKW IFVLSVSKIL YVGMKKKGNF
301: QHSSFLAGGA TLSAGRIVVD DGVLKAVWPH SGHYLPTEEN FQAFMSFLRE NNVDLANVKK NPDEEDGEAP AKVKRMPSRI KETEEEHCDF VDAETGFSPN
401: TKPNNHAELQ TLSRFHSKLS RLDEIPDEDD NMIEEEQDDE EEPETPSEQG YETAEETFIA EEEFTYPKSN LFDEDIEDYE KPVLKEKIMR RIDSHKGIKS
501: YQLAERLHSR WSTGAGPRIS CMRDYPSELQ FRVLEQAHLS PRASSNSSKI SPFAPVRTRG TSLGRSPLAE ELENL

Arabidopsis Description

IQM6IQ domain-containing protein IQM6 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2G8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.