Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400021529 | Potato | cytosol | 95.22 | 90.31 |
| Solyc10g080640.1.1 | Tomato | nucleus | 63.1 | 60.51 |
| VIT_08s0007g07190.t01 | Wine grape | cytosol | 47.61 | 54.22 |
| Solyc03g121770.1.1 | Tomato | cytosol | 23.23 | 52.81 |
| KRH71773 | Soybean | nucleus | 47.12 | 51.07 |
| CDX88987 | Canola | nucleus | 46.29 | 50.91 |
| CDY00568 | Canola | nucleus | 46.46 | 50.36 |
| Bra014570.1-P | Field mustard | nucleus | 46.46 | 50.09 |
| AT3G58480.1 | Thale cress | nucleus | 47.28 | 49.91 |
| HORVU1Hr1G045060.3 | Barley | nucleus | 30.31 | 49.86 |
| HORVU4Hr1G074540.1 | Barley | cytosol | 20.59 | 49.8 |
| HORVU2Hr1G015200.2 | Barley | cytosol | 32.62 | 49.5 |
| KRH38004 | Soybean | cytosol | 47.45 | 48.4 |
| TraesCS5A01G375700.1 | Wheat | cytosol | 41.85 | 47.57 |
| GSMUA_Achr4P13570_001 | Banana | cytosol | 42.5 | 47.43 |
| TraesCS5B01G377900.1 | Wheat | cytosol | 42.01 | 47.4 |
| HORVU2Hr1G074420.1 | Barley | cytosol | 11.53 | 47.3 |
| GSMUA_Achr9P21650_001 | Banana | plastid, vacuole | 44.15 | 47.18 |
| GSMUA_Achr4P06580_001 | Banana | cytosol | 42.01 | 47.13 |
| Zm00001d047402_P001 | Maize | cytosol | 41.52 | 46.84 |
| GSMUA_Achr6P01520_001 | Banana | cytosol | 18.29 | 46.84 |
| Solyc07g040710.2.1 | Tomato | cytosol | 35.75 | 46.57 |
| Solyc01g044420.2.1 | Tomato | nucleus | 44.15 | 46.53 |
| Solyc12g008960.1.1 | Tomato | nucleus | 37.56 | 46.25 |
| Os07t0633400-01 | Rice | cytosol | 43.66 | 45.3 |
| EER92212 | Sorghum | cytosol | 42.83 | 45.3 |
| Os03t0374500-00 | Rice | nucleus | 43.0 | 45.23 |
| TraesCS2A01G154900.1 | Wheat | cytosol | 42.01 | 45.21 |
| TraesCS2D01G160200.1 | Wheat | cytosol | 42.34 | 45.01 |
| HORVU2Hr1G028140.2 | Barley | cytosol | 41.68 | 44.62 |
| TraesCS2B01G180000.1 | Wheat | cytosol | 42.01 | 44.58 |
| HORVU5Hr1G093140.18 | Barley | cytosol, nucleus | 41.85 | 44.48 |
| HORVU7Hr1G052820.45 | Barley | cytosol | 17.96 | 44.13 |
| HORVU5Hr1G023670.50 | Barley | cytosol | 17.96 | 44.13 |
| HORVU4Hr1G052500.37 | Barley | cytosol, nucleus | 17.63 | 43.32 |
| HORVU2Hr1G028150.1 | Barley | cytosol | 41.68 | 42.81 |
| Solyc10g085610.1.1 | Tomato | cytosol | 30.48 | 42.53 |
| GSMUA_Achr4P11190_001 | Banana | cytosol | 40.86 | 42.32 |
| Solyc10g083360.1.1 | Tomato | cytosol | 32.29 | 42.06 |
| TraesCS5D01G385200.2 | Wheat | cytosol | 38.55 | 42.01 |
| Solyc01g005800.2.1 | Tomato | nucleus | 45.14 | 41.45 |
| Os03t0167200-01 | Rice | plasma membrane | 41.02 | 40.82 |
| EER97603 | Sorghum | nucleus | 42.5 | 40.76 |
| Os10t0411500-01 | Rice | plasma membrane | 43.33 | 40.52 |
| TraesCS4A01G021000.1 | Wheat | nucleus | 40.69 | 40.49 |
| TraesCS4D01G281600.1 | Wheat | nucleus | 40.86 | 40.46 |
| GSMUA_Achr6P01560_001 | Banana | mitochondrion | 17.63 | 40.07 |
| HORVU4Hr1G074550.4 | Barley | cytosol | 40.2 | 39.87 |
| Zm00001d032981_P001 | Maize | cytosol | 42.83 | 39.63 |
| HORVU3Hr1G010590.3 | Barley | nucleus | 19.44 | 39.46 |
| Zm00001d027815_P002 | Maize | nucleus | 41.68 | 39.41 |
| HORVU5Hr1G120690.3 | Barley | nucleus | 19.44 | 38.94 |
| KXG40105 | Sorghum | cytosol | 40.69 | 38.78 |
| Zm00001d022245_P001 | Maize | cytosol | 41.85 | 38.43 |
| Solyc09g009770.2.1 | Tomato | nucleus | 33.11 | 38.29 |
| EER94258 | Sorghum | cytosol | 42.34 | 38.24 |
| GSMUA_Achr3P29200_001 | Banana | cytosol | 39.37 | 37.34 |
| TraesCS4B01G282600.2 | Wheat | nucleus | 40.69 | 36.92 |
| Solyc08g062930.1.1 | Tomato | cytosol | 23.39 | 36.41 |
| GSMUA_Achr6P01510_001 | Banana | nucleus | 12.03 | 35.27 |
| HORVU2Hr1G074410.1 | Barley | cytosol, nucleus | 8.24 | 34.25 |
| Zm00001d024699_P001 | Maize | nucleus | 17.46 | 33.54 |
| HORVU5Hr1G110660.2 | Barley | mitochondrion | 5.77 | 28.23 |
| TraesCS2B01G401000.1 | Wheat | plastid | 14.83 | 25.94 |
Protein Annotations
| EnsemblPlants:Solyc10g078650.1.1 | EnsemblPlantsGene:Solyc10g078650.1 | PANTHER:PTHR31250 | PANTHER:PTHR31250:SF4 | SEG:seg | UniParc:UPI000276A3D9 |
| UniProt:K4D2A7 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr10:-:60390338..60393352
Molecular Weight (calculated)
69865.2 Da
IEP (calculated)
9.705
GRAVY (calculated)
-0.692
Length
607 amino acids
Sequence
(BLAST)
(BLAST)
001: MKNVLHTKNF NDQITRKSKI LKSFGSGNMI LEGTLTYKRR EFEAKIALRT LISDKEDKKI NRSDNPWNRA EVSPKLHSIS DKDTRMLPVE YGKHRDQAAV
101: KLQKTYKSFR TRRQLADCAV LVEHRWWKLL DSVELKHSSI SYFDTKKPQT AVSRWSRALT RAAKVGKGLS KDGKARKLAL QHWLEAIDPR HRYGHNLRFY
201: YNKWLQADSK QPFFYWLDIG EGKEINLERC PRPKLQQDCI KYLGPIEREA YEIVIVGGKF LYKQSRRLLD TRGGPPEAKW IFVLSVSKIL YVGMKKKGTF
301: QHSSFLAGGA ALSAGRLVAE DGIIKAVWPQ SGHYLPTEEN FEAFMLFLKQ LQVDIAVVQK FTNYEDDAPS TRKECHTNIR KNLSVSDFSQ INEDSSLKSS
401: DTKRIGSTNK DCDDEEFSVP HFPRQPRGVR PKIAVEIPEK EGIFELFKET AQQVQPVETP ADGYETPDEY LSDTEFSVSK KNLFDHENEE EFKEPVPEEK
501: IIKRIHSHIG MKSNHLAHQL SSCKWTTGAG PRIGCMRDYP SELQFRVMEE VQLSPRPAFP ASSKFARRYT PTIFSREAND QGKRPDFEVV VFCESDSPSV
601: KREAVFG
101: KLQKTYKSFR TRRQLADCAV LVEHRWWKLL DSVELKHSSI SYFDTKKPQT AVSRWSRALT RAAKVGKGLS KDGKARKLAL QHWLEAIDPR HRYGHNLRFY
201: YNKWLQADSK QPFFYWLDIG EGKEINLERC PRPKLQQDCI KYLGPIEREA YEIVIVGGKF LYKQSRRLLD TRGGPPEAKW IFVLSVSKIL YVGMKKKGTF
301: QHSSFLAGGA ALSAGRLVAE DGIIKAVWPQ SGHYLPTEEN FEAFMLFLKQ LQVDIAVVQK FTNYEDDAPS TRKECHTNIR KNLSVSDFSQ INEDSSLKSS
401: DTKRIGSTNK DCDDEEFSVP HFPRQPRGVR PKIAVEIPEK EGIFELFKET AQQVQPVETP ADGYETPDEY LSDTEFSVSK KNLFDHENEE EFKEPVPEEK
501: IIKRIHSHIG MKSNHLAHQL SSCKWTTGAG PRIGCMRDYP SELQFRVMEE VQLSPRPAFP ASSKFARRYT PTIFSREAND QGKRPDFEVV VFCESDSPSV
601: KREAVFG
001: METKTILRSI SFNDIDSDST ITESPEARKT LYNRSLSGKG TQRSRISPGD VENNFSIKPL TFMKEDDRYK MRIWKPVCEN EHAKEFLALL LGDGTYQAAL
101: KLQKVYRSFR TRRRLADCAV VVEQRWWKVL DFAELKRSSI SFFEIEKQET AVSRWSRART RAAKVGKGLS KDEKARKLAL QHWLEAIDPR HRYGHNLQFY
201: YHAWLHCDSK QPFFYWLDIG QGKELNHERC PRSKLYQQSI KYLGPTEREA YEVIIEDGKL MYKQSGIVLD TKEGPPDAKW IFVLSVSKIL YVGMKKKGNF
301: QHSSFLAGGA TLSAGRIVVD DGVLKAVWPH SGHYLPTEEN FQAFMSFLRE NNVDLANVKK NPDEEDGEAP AKVKRMPSRI KETEEEHCDF VDAETGFSPN
401: TKPNNHAELQ TLSRFHSKLS RLDEIPDEDD NMIEEEQDDE EEPETPSEQG YETAEETFIA EEEFTYPKSN LFDEDIEDYE KPVLKEKIMR RIDSHKGIKS
501: YQLAERLHSR WSTGAGPRIS CMRDYPSELQ FRVLEQAHLS PRASSNSSKI SPFAPVRTRG TSLGRSPLAE ELENL
101: KLQKVYRSFR TRRRLADCAV VVEQRWWKVL DFAELKRSSI SFFEIEKQET AVSRWSRART RAAKVGKGLS KDEKARKLAL QHWLEAIDPR HRYGHNLQFY
201: YHAWLHCDSK QPFFYWLDIG QGKELNHERC PRSKLYQQSI KYLGPTEREA YEVIIEDGKL MYKQSGIVLD TKEGPPDAKW IFVLSVSKIL YVGMKKKGNF
301: QHSSFLAGGA TLSAGRIVVD DGVLKAVWPH SGHYLPTEEN FQAFMSFLRE NNVDLANVKK NPDEEDGEAP AKVKRMPSRI KETEEEHCDF VDAETGFSPN
401: TKPNNHAELQ TLSRFHSKLS RLDEIPDEDD NMIEEEQDDE EEPETPSEQG YETAEETFIA EEEFTYPKSN LFDEDIEDYE KPVLKEKIMR RIDSHKGIKS
501: YQLAERLHSR WSTGAGPRIS CMRDYPSELQ FRVLEQAHLS PRASSNSSKI SPFAPVRTRG TSLGRSPLAE ELENL
Arabidopsis Description
IQM6IQ domain-containing protein IQM6 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2G8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.