Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||
|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU1Hr1G045060.3 | Barley | nucleus | 69.5 | 75.34 |
| HORVU2Hr1G074420.1 | Barley | cytosol | 27.25 | 73.65 |
| TraesCS5A01G375700.1 | Wheat | cytosol | 85.0 | 63.67 |
| HORVU5Hr1G093140.18 | Barley | cytosol, nucleus | 89.75 | 62.87 |
| HORVU4Hr1G074540.1 | Barley | cytosol | 36.5 | 58.17 |
| TraesCS5D01G385200.2 | Wheat | cytosol | 78.5 | 56.37 |
| Zm00001d047402_P001 | Maize | cytosol | 75.0 | 55.76 |
| Os03t0374500-00 | Rice | nucleus | 77.75 | 53.9 |
| EER92212 | Sorghum | cytosol | 77.25 | 53.83 |
| HORVU6Hr1G066990.1 | Barley | mitochondrion | 19.25 | 50.0 |
| HORVU7Hr1G052820.45 | Barley | cytosol | 30.5 | 49.39 |
| HORVU5Hr1G023670.50 | Barley | cytosol | 30.5 | 49.39 |
| HORVU4Hr1G052500.37 | Barley | cytosol, nucleus | 30.25 | 48.99 |
| HORVU2Hr1G028140.2 | Barley | cytosol | 68.5 | 48.32 |
| HORVU2Hr1G028150.1 | Barley | cytosol | 68.5 | 46.36 |
| Bra021491.1-P | Field mustard | nucleus | 51.25 | 41.58 |
| VIT_08s0007g07190.t01 | Wine grape | cytosol | 54.25 | 40.71 |
| Bra027414.1-P | Field mustard | nucleus | 56.0 | 38.89 |
| AT3G13600.1 | Thale cress | nucleus | 57.25 | 37.85 |
| HORVU4Hr1G074550.4 | Barley | cytosol | 57.75 | 37.75 |
| Bra001512.1-P | Field mustard | cytosol | 48.75 | 36.86 |
| HORVU3Hr1G010590.3 | Barley | nucleus | 27.5 | 36.79 |
| Bra014570.1-P | Field mustard | nucleus | 51.75 | 36.77 |
| KRG97321 | Soybean | nucleus | 50.75 | 36.31 |
| KRH71773 | Soybean | nucleus | 50.75 | 36.25 |
| Solyc01g044420.2.1 | Tomato | nucleus | 52.0 | 36.11 |
| AT3G58480.1 | Thale cress | nucleus | 51.25 | 35.65 |
| HORVU5Hr1G120690.3 | Barley | nucleus | 27.0 | 35.64 |
| PGSC0003DMT400080788 | Potato | nucleus | 48.0 | 35.23 |
| KRH58931 | Soybean | nucleus | 57.75 | 35.21 |
| HORVU5Hr1G041930.15 | Barley | cytosol | 42.0 | 34.78 |
| KRH38004 | Soybean | cytosol | 51.5 | 34.62 |
| VIT_06s0004g00690.t01 | Wine grape | nucleus | 57.75 | 34.48 |
| KRH42833 | Soybean | cytosol | 56.75 | 34.34 |
| HORVU6Hr1G019510.4 | Barley | cytosol | 41.0 | 34.31 |
| HORVU3Hr1G049640.1 | Barley | plastid | 46.75 | 33.94 |
| Solyc10g080640.1.1 | Tomato | nucleus | 52.5 | 33.18 |
| Solyc10g078650.1.1 | Tomato | nucleus | 49.5 | 32.62 |
| Solyc01g005800.2.1 | Tomato | nucleus | 53.5 | 32.38 |
| PGSC0003DMT400021529 | Potato | cytosol | 51.0 | 31.88 |
| HORVU1Hr1G028900.11 | Barley | cytosol, mitochondrion, nucleus | 47.5 | 31.2 |
| TraesCS2B01G401000.1 | Wheat | plastid | 26.5 | 30.55 |
| PGSC0003DMT400060938 | Potato | nucleus, plastid | 47.5 | 27.1 |
| HORVU5Hr1G110660.2 | Barley | mitochondrion | 0.0 | 0.0 |
| HORVU2Hr1G074410.1 | Barley | cytosol, nucleus | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G015200.2 | EnsemblPlantsGene:HORVU2Hr1G015200 | PANTHER:PTHR31250 | PANTHER:PTHR31250:SF16 | SEG:seg | MapMan:35.1 |
Description
No Description!
Coordinates
chrchr2H:-:33663952..33688956
Molecular Weight (calculated)
43821.8 Da
IEP (calculated)
8.644
GRAVY (calculated)
-0.603
Length
400 amino acids
Sequence
(BLAST)
(BLAST)
001: XXXXXXXXXX XXXXFSCPAD DYDPMDAPAD SGEGEPAILW ALGSGKLLIQ GSLNFKREQQ LDHSSGSLQL ETEISIRAGD IAAAAAKAEA PLPLMPRALA
101: RLRDADGESP RHEAAALRLQ KVYKSFRTRR QLADCAVLVE QSWWKLLDFA LLNRSSVSFF DIEKQETAVS KWSRARSRAA KVGKGLSKDD KAQKLTLQHW
201: LEEIDPRHRY GHNLHYYYDC WLHSESKQPF FYWLDVGEGK EINLEGKCSR SKLLSQCIKY LGPKEREDYE VVTEDNKFMY RKSRQIIDTS FGPRDAKWIF
301: VLSTSKSMYV GQKKKGKFQH SSFLVGGATS AAGRLVAENG TLKAIWPHSG HYRPTEENFQ EFKSFLKDNL VDLTDVKMSP AEEDEEFWVA SKGSPRRTTK
101: RLRDADGESP RHEAAALRLQ KVYKSFRTRR QLADCAVLVE QSWWKLLDFA LLNRSSVSFF DIEKQETAVS KWSRARSRAA KVGKGLSKDD KAQKLTLQHW
201: LEEIDPRHRY GHNLHYYYDC WLHSESKQPF FYWLDVGEGK EINLEGKCSR SKLLSQCIKY LGPKEREDYE VVTEDNKFMY RKSRQIIDTS FGPRDAKWIF
301: VLSTSKSMYV GQKKKGKFQH SSFLVGGATS AAGRLVAENG TLKAIWPHSG HYRPTEENFQ EFKSFLKDNL VDLTDVKMSP AEEDEEFWVA SKGSPRRTTK
001: MGLSLSLLLS AWKEVVTTQF FSFKNPVESF LETRSFSLKL KEGGLTSRTN SFKSENPQEK SPKTGMERSL SFNSWEIVTE VETEPMNKED EEIVEPTKPA
101: RNSLNGRNCE RIQITKPTIT PPTPFVFFSP RPVTELDAAA TTLQKVYKSY RTRRNLADCA VVVEELWWKT LDAAALNLSS VAFFEEEKHE TAVSKWARAR
201: TRAAKVGKGL SKDEKAQKLA LQHWLEAIDP RHRYGHNLHF YYDVWSASMS AQPFFYWLDI GDGKDVNLEH HPRSVLQKQC IKYLGPLERE AYEVIVEDGK
301: LMNKQSMTLI NSTEDSKSIF VLSTTRTLYV GQKKKGRFQH SSFLSGGATT AAGRLVAREG ILEAIWPYSG HYLPTEDNFN EFISFLEENN VDMTNVKVRN
401: IIFGCIHAKY EKWYVLTYLI
101: RNSLNGRNCE RIQITKPTIT PPTPFVFFSP RPVTELDAAA TTLQKVYKSY RTRRNLADCA VVVEELWWKT LDAAALNLSS VAFFEEEKHE TAVSKWARAR
201: TRAAKVGKGL SKDEKAQKLA LQHWLEAIDP RHRYGHNLHF YYDVWSASMS AQPFFYWLDI GDGKDVNLEH HPRSVLQKQC IKYLGPLERE AYEVIVEDGK
301: LMNKQSMTLI NSTEDSKSIF VLSTTRTLYV GQKKKGRFQH SSFLSGGATT AAGRLVAREG ILEAIWPYSG HYLPTEDNFN EFISFLEENN VDMTNVKVRN
401: IIFGCIHAKY EKWYVLTYLI
Arabidopsis Description
IQM4IQ domain-containing protein IQM4 [Source:UniProtKB/Swiss-Prot;Acc:O64851]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.