Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G125400.1 | Wheat | nucleus | 75.53 | 88.97 |
| TraesCS1D01G128400.2 | Wheat | nucleus | 80.46 | 87.97 |
| TraesCS1B01G143800.1 | Wheat | cytosol | 80.79 | 84.83 |
| Os05t0197300-01 | Rice | cytosol | 65.19 | 71.4 |
| KXG21506 | Sorghum | cytosol | 62.07 | 67.86 |
| Zm00001d037759_P002 | Maize | mitochondrion | 61.08 | 67.15 |
| GSMUA_Achr6P04920_001 | Banana | endoplasmic reticulum, vacuole | 48.44 | 57.06 |
| GSMUA_Achr7P09200_001 | Banana | cytosol, extracellular, nucleus, plastid | 44.99 | 53.73 |
| HORVU4Hr1G074540.1 | Barley | cytosol | 20.69 | 50.2 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum | 42.53 | 50.1 |
| HORVU1Hr1G045060.3 | Barley | nucleus | 29.23 | 48.24 |
| HORVU2Hr1G015200.2 | Barley | cytosol | 31.2 | 47.5 |
| HORVU3Hr1G049640.1 | Barley | plastid | 40.89 | 45.19 |
| HORVU7Hr1G052820.45 | Barley | cytosol | 17.24 | 42.51 |
| HORVU6Hr1G066990.1 | Barley | mitochondrion | 10.67 | 42.21 |
| HORVU4Hr1G052500.37 | Barley | cytosol, nucleus | 17.08 | 42.11 |
| HORVU5Hr1G023670.50 | Barley | cytosol | 17.08 | 42.11 |
| HORVU2Hr1G074420.1 | Barley | cytosol | 10.18 | 41.89 |
| HORVU2Hr1G028140.2 | Barley | cytosol | 38.1 | 40.92 |
| HORVU6Hr1G019510.4 | Barley | cytosol | 31.86 | 40.59 |
| HORVU5Hr1G041930.15 | Barley | cytosol | 31.69 | 39.96 |
| HORVU5Hr1G093140.18 | Barley | cytosol, nucleus | 37.44 | 39.93 |
| HORVU2Hr1G028150.1 | Barley | cytosol | 38.1 | 39.26 |
| HORVU4Hr1G074550.4 | Barley | cytosol | 36.29 | 36.11 |
| CDX80650 | Canola | extracellular | 4.76 | 33.33 |
| HORVU5Hr1G120690.3 | Barley | nucleus | 15.76 | 31.68 |
| HORVU3Hr1G010590.3 | Barley | nucleus | 15.44 | 31.44 |
| HORVU5Hr1G110660.2 | Barley | mitochondrion | 4.93 | 24.19 |
| HORVU2Hr1G074410.1 | Barley | cytosol, nucleus | 5.42 | 22.6 |
Protein Annotations
| EnsemblPlants:HORVU1Hr1G028900.11 | EnsemblPlantsGene:HORVU1Hr1G028900 | PANTHER:PTHR31250 | PANTHER:PTHR31250:SF1 | SEG:seg | UniParc:UPI000B467886 |
| UniProt:A0A287F0T9 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chrchr1H:+:159594547..159598060
Molecular Weight (calculated)
68017.8 Da
IEP (calculated)
9.268
GRAVY (calculated)
-0.667
Length
609 amino acids
Sequence
(BLAST)
(BLAST)
001: LEYKTDVSGA SPRFRYIYIR GSVSSPEVRC TSTFDGLPHI RFLSHPSTPS AIPVASGEDS SSWVAAPRPQ FIGLYRRARS EVVGTEISSP RTHKTDMVNK
101: IPSPRDERNK KHLFSKATLV RSVSFKQWQG GEKSTGSVQN KSKQSLINGI QDRRNSDASS PNVSSSPKCE LDAAAVKLQK VYKSYRTRRN LADCAVVVEE
201: LWWKALDFAS LKHSSISFFN GGKPETAASR WARARTRAAK VGKGLSKNGK AQKLALQHWL EAIDPRHRYG HNLHIYYDVW SRSESTEPFF YWLDIGEGKE
301: INLENCPRTK LQGQCVKYLG PQERQHYEVA IEGGKLIFKQ TGVLVQTSDD SKWIFVLSTT KAFYVGQKKK GSFQHSSFLA GGAITCAGRL VVKDGILKAV
401: WPYSGHYLPT EENFRDFIRF LQENDVSLTD VKKSAIDKHD EYPLPSKSDT QLEHVEHNND ATEDLAEVEI DGVLAVETDH GDMSDAEEDA GTPVDSHTTD
501: TEGGGEEEEV QRPPASVDHG KNHQTCRWST GTGPRIRCVR DYPQDLQSRA LEHVNLSPRL AGSPSRKRDP VPSPRPSPGM ILSPRLASVG FQPRTVSLTL
601: PDFKRSRLQ
101: IPSPRDERNK KHLFSKATLV RSVSFKQWQG GEKSTGSVQN KSKQSLINGI QDRRNSDASS PNVSSSPKCE LDAAAVKLQK VYKSYRTRRN LADCAVVVEE
201: LWWKALDFAS LKHSSISFFN GGKPETAASR WARARTRAAK VGKGLSKNGK AQKLALQHWL EAIDPRHRYG HNLHIYYDVW SRSESTEPFF YWLDIGEGKE
301: INLENCPRTK LQGQCVKYLG PQERQHYEVA IEGGKLIFKQ TGVLVQTSDD SKWIFVLSTT KAFYVGQKKK GSFQHSSFLA GGAITCAGRL VVKDGILKAV
401: WPYSGHYLPT EENFRDFIRF LQENDVSLTD VKKSAIDKHD EYPLPSKSDT QLEHVEHNND ATEDLAEVEI DGVLAVETDH GDMSDAEEDA GTPVDSHTTD
501: TEGGGEEEEV QRPPASVDHG KNHQTCRWST GTGPRIRCVR DYPQDLQSRA LEHVNLSPRL AGSPSRKRDP VPSPRPSPGM ILSPRLASVG FQPRTVSLTL
601: PDFKRSRLQ
001: METKTILRSI SFNDIDSDST ITESPEARKT LYNRSLSGKG TQRSRISPGD VENNFSIKPL TFMKEDDRYK MRIWKPVCEN EHAKEFLALL LGDGTYQAAL
101: KLQKVYRSFR TRRRLADCAV VVEQRWWKVL DFAELKRSSI SFFEIEKQET AVSRWSRART RAAKVGKGLS KDEKARKLAL QHWLEAIDPR HRYGHNLQFY
201: YHAWLHCDSK QPFFYWLDIG QGKELNHERC PRSKLYQQSI KYLGPTEREA YEVIIEDGKL MYKQSGIVLD TKEGPPDAKW IFVLSVSKIL YVGMKKKGNF
301: QHSSFLAGGA TLSAGRIVVD DGVLKAVWPH SGHYLPTEEN FQAFMSFLRE NNVDLANVKK NPDEEDGEAP AKVKRMPSRI KETEEEHCDF VDAETGFSPN
401: TKPNNHAELQ TLSRFHSKLS RLDEIPDEDD NMIEEEQDDE EEPETPSEQG YETAEETFIA EEEFTYPKSN LFDEDIEDYE KPVLKEKIMR RIDSHKGIKS
501: YQLAERLHSR WSTGAGPRIS CMRDYPSELQ FRVLEQAHLS PRASSNSSKI SPFAPVRTRG TSLGRSPLAE ELENL
101: KLQKVYRSFR TRRRLADCAV VVEQRWWKVL DFAELKRSSI SFFEIEKQET AVSRWSRART RAAKVGKGLS KDEKARKLAL QHWLEAIDPR HRYGHNLQFY
201: YHAWLHCDSK QPFFYWLDIG QGKELNHERC PRSKLYQQSI KYLGPTEREA YEVIIEDGKL MYKQSGIVLD TKEGPPDAKW IFVLSVSKIL YVGMKKKGNF
301: QHSSFLAGGA TLSAGRIVVD DGVLKAVWPH SGHYLPTEEN FQAFMSFLRE NNVDLANVKK NPDEEDGEAP AKVKRMPSRI KETEEEHCDF VDAETGFSPN
401: TKPNNHAELQ TLSRFHSKLS RLDEIPDEDD NMIEEEQDDE EEPETPSEQG YETAEETFIA EEEFTYPKSN LFDEDIEDYE KPVLKEKIMR RIDSHKGIKS
501: YQLAERLHSR WSTGAGPRIS CMRDYPSELQ FRVLEQAHLS PRASSNSSKI SPFAPVRTRG TSLGRSPLAE ELENL
Arabidopsis Description
IQM6IQ domain-containing protein IQM6 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2G8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.