Factsheet for GSMUA_Achr6P04920_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole

Predictor Summary:

nucleus 1
extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 4
golgi 4
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, vacuole
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	extracellular
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P09200_001	Banana	cytosol, extracellular, nucleus, plastid	61.9	62.75
GSMUA_Achr10P...	Banana	endoplasmic reticulum	56.87	56.87
GSMUA_Achr4P09170_001	Banana	cytosol	52.42	55.76
TraesCS1A01G125400.1	Wheat	nucleus	55.71	55.71
GSMUA_Achr8P05470_001	Banana	plastid	53.38	55.31
GSMUA_Achr3P25890_001	Banana	mitochondrion	55.13	55.02
GSMUA_Achr8P24930_001	Banana	cytosol	40.81	54.81
TraesCS1D01G128400.2	Wheat	nucleus	57.64	53.5
Os05t0197300-01	Rice	cytosol	57.45	53.42
GSMUA_Achr6P05460_001	Banana	cytosol	55.9	53.12
GSMUA_Achr8P26270_001	Banana	plastid	49.13	52.92
KXG21506	Sorghum	cytosol	56.67	52.6
Zm00001d037759_P002	Maize	mitochondrion	55.9	52.17
GSMUA_Achr4P08700_001	Banana	extracellular, nucleus, plastid, vacuole	52.8	50.93
TraesCS1B01G143800.1	Wheat	cytosol	56.87	50.69
GSMUA_Achr6P01520_001	Banana	cytosol	22.24	48.52
HORVU1Hr1G028900.11	Barley	cytosol, mitochondrion, nucleus	57.06	48.44
GSMUA_Achr3P03060_001	Banana	cytosol	33.66	45.55
GSMUA_Achr4P06580_001	Banana	cytosol	45.84	43.81
GSMUA_Achr4P13570_001	Banana	cytosol	44.1	41.91
GSMUA_Achr6P13300_001	Banana	cytosol	38.1	39.8
GSMUA_Achr9P21650_001	Banana	plastid, vacuole	43.71	39.79
GSMUA_Achr6P01560_001	Banana	mitochondrion	19.73	38.2
GSMUA_Achr4P11190_001	Banana	cytosol	43.13	38.05
GSMUA_Achr3P29200_001	Banana	cytosol	43.13	34.84
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plastid	36.56	33.75
CDX80650	Canola	extracellular	5.22	31.03
GSMUA_Achr3P32310_001	Banana	endoplasmic reticulum	51.06	29.3
GSMUA_Achr6P01510_001	Banana	nucleus	11.22	28.02

Protein Annotations

EnsemblPlants:GSMUA_Achr6P04920_001	EnsemblPlants:GSMUA_Achr6T04920_001	EnsemblPlantsGene:GSMUA_Achr6G04920_001	PANTHER:PTHR31250	PANTHER:PTHR31250:SF25	SEG:seg
UniParc:UPI000296C626	UniProt:M0T490	MapMan:35.1	:	:	:

Description

calmodulin-binding protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr6G04920_001]

Coordinates

chr6:+:3346116..3349157

Molecular Weight (calculated)

58041.6 Da

IEP (calculated)

9.033

GRAVY (calculated)

-0.453

Length

517 amino acids

Sequence
(BLAST)

001: MGVNLSLLCC PWVELMGSKI FALTEEDEEM KALSFMEKDV KTITRSTSCK QNGLMIKITS CASLKKSLGF KNWDQDKVKT ETNISSKNQD EDDDTKEPPA
101: EGTGNIADRK LNPASCLLVS PRPIKELDAA AVKLQKVYKS YRTRRNLADC AVVAEELWWK ALDFASLKHS SISFFNGEKP ETAASRWARA RTRAAKVGKG
201: LSKNHKAQKL ALQHWLEAID PRHRYGHNLH LYYDVWVKSE SKQPFFYWLD VSDGKEVNLV KCPRTKLQQE CIKYLGPKER QAYEVVVEDG KLLYKQNGKF
301: VDTNEGSKWI FVLSTTKALY VGQKEKGSFQ HSSFLAGGAT IAAGRLIAKV GILKAVWPYS GHYLPTEENF KEFVCFLQEN NVCLTDVKRR AIVEDDYYPP
401: LKMPRIDSLI DMNKGTRARG AVESKTLEAG DSSETEAEEG ALNSLIDVCV RNYPTDLQFK ALEQVNLSPR SIPSPIVNND PIPSPRPNSG MRLSPTLASM
501: ALPAPIISLT LPKHRRC

Best Arabidopsis Sequence Match ( AT2G26190.2 )
(BLAST)

001: MGLSLSLLLS AWKEVVTTQF FSFKNPVESF LETRSFSLKL KEGGLTSRTN SFKSENPQEK SPKTGMERSL SFNSWEIVTE VETEPMNKED EEIVEPTKPA
101: RNSLNGRNCE RIQITKPTIT PPTPFVFFSP RPVTELDAAA TTLQKVYKSY RTRRNLADCA VVVEELWWKT LDAAALNLSS VAFFEEEKHE TAVSKWARAR
201: TRAAKVGKGL SKDEKAQKLA LQHWLEAIDP RHRYGHNLHF YYDVWSASMS AQPFFYWLDI GDGKDVNLEH HPRSVLQKQC IKYLGPLERE AYEVIVEDGK
301: LMNKQSMTLI NSTEDSKSIF VLSTTRTLYV GQKKKGRFQH SSFLSGGATT AAGRLVAREG ILEAIWPYSG HYLPTEDNFN EFISFLEENN VDMTNVKVRN
401: IIFGCIHAKY EKWYVLTYLI

Arabidopsis Description

IQM4IQ domain-containing protein IQM4 [Source:UniProtKB/Swiss-Prot;Acc:O64851]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.