Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G128400.2 | Wheat | nucleus | 97.87 | 90.84 |
| TraesCS1B01G143800.1 | Wheat | cytosol | 97.1 | 86.55 |
| HORVU1Hr1G028900.11 | Barley | cytosol, mitochondrion, nucleus | 88.97 | 75.53 |
| Os05t0197300-01 | Rice | cytosol | 72.73 | 67.63 |
| KXG21506 | Sorghum | cytosol | 72.53 | 67.33 |
| Zm00001d037759_P002 | Maize | mitochondrion | 68.86 | 64.26 |
| GSMUA_Achr6P04920_001 | Banana | endoplasmic reticulum, vacuole | 55.71 | 55.71 |
| GSMUA_Achr7P09200_001 | Banana | cytosol, extracellular, nucleus, plastid | 51.84 | 52.55 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum | 48.74 | 48.74 |
| TraesCS3A01G206400.1 | Wheat | plastid | 48.36 | 44.96 |
| TraesCS5A01G375700.1 | Wheat | cytosol | 44.49 | 43.07 |
| TraesCS2A01G154900.1 | Wheat | cytosol | 45.07 | 41.31 |
| TraesCS5A01G129600.1 | Wheat | cytosol | 36.75 | 41.21 |
| TraesCS6A01G108900.1 | Wheat | cytosol | 37.91 | 40.41 |
| TraesCS4A01G021000.1 | Wheat | nucleus | 42.36 | 35.9 |
| CDX80650 | Canola | extracellular | 5.42 | 32.18 |
| TraesCS6A01G104600.1 | Wheat | nucleus | 14.51 | 27.57 |
Protein Annotations
| EnsemblPlants:TraesCS1A01G125400.1 | EnsemblPlantsGene:TraesCS1A01G125400 | PANTHER:PTHR31250 | PANTHER:PTHR31250:SF1 | SEG:seg | MapMan:35.1 |
Description
No Description!
Coordinates
chr1A:-:149352497..149355220
Molecular Weight (calculated)
57814.6 Da
IEP (calculated)
7.899
GRAVY (calculated)
-0.696
Length
517 amino acids
Sequence
(BLAST)
(BLAST)
001: MTLKSQGQEH LFSKATLMHS VSFKQWRGGE ESTGSVQNKS KQSLVNGIQD RRNSDALSPN VSSSPKCELD AAAVKLQKVY KSYRTRRNLA DCAVVVEELW
101: WKALDFASLK HSSISFFNGG KPETAASRWA RARTRAAKVG KGLSKNGKAQ KLALQHWLEA IDPRHRYGHN LHIYYDVWSR SESTEPFFYW LDIGEGKEIN
201: LENCPRSKLQ GQCVKYLGPQ ERQHYEVVIE GGKLMFKQTG VLVHTSDDSK WIFVLSTTKA FYVGQKKKGS FQHSSFLAGG AITCAGRLVV KDGILKAIWP
301: YSGHYLPTED NFRDFIRFLQ ENDVSLTDVK KSDVDKHDEY PLLSNSDAQP EHVENNDAAG AAAQDLTEVE IDGVLTGEAY HGSADHDDMS DAEEDAGTPV
401: DSHTTDTEEE EEANNISEQR PPASVDRSKN HQTCRWSTGT GPRIRCVRDY PQDLQSRALE HVNLSPRLAG SPSRKRDPVP SPRPSPGMIL SPRLASVGFQ
501: PRTVSLTLPD FKRSRLQ
101: WKALDFASLK HSSISFFNGG KPETAASRWA RARTRAAKVG KGLSKNGKAQ KLALQHWLEA IDPRHRYGHN LHIYYDVWSR SESTEPFFYW LDIGEGKEIN
201: LENCPRSKLQ GQCVKYLGPQ ERQHYEVVIE GGKLMFKQTG VLVHTSDDSK WIFVLSTTKA FYVGQKKKGS FQHSSFLAGG AITCAGRLVV KDGILKAIWP
301: YSGHYLPTED NFRDFIRFLQ ENDVSLTDVK KSDVDKHDEY PLLSNSDAQP EHVENNDAAG AAAQDLTEVE IDGVLTGEAY HGSADHDDMS DAEEDAGTPV
401: DSHTTDTEEE EEANNISEQR PPASVDRSKN HQTCRWSTGT GPRIRCVRDY PQDLQSRALE HVNLSPRLAG SPSRKRDPVP SPRPSPGMIL SPRLASVGFQ
501: PRTVSLTLPD FKRSRLQ
001: MGLEVGSLCF KLKDGGLTSR TNSFKRDDTN RHQNSPKSTM ERSLSFNSWE VPKETKTDSD FEVLETKKST PNTLNGRNCE RIQIKKPTVT PPEPFVFFSP
101: RPVTELDAAA TTLQKVYKSY RTRRNLADCA VVVEELWWRT LEGAALDLSS VSFFGEEKHE TAVSKWARAR KRAAKVGKGL SKDEKAQKLA LQHWLEAIDP
201: RHRYGHNLHF YYDVWSASKS TQPFFYWLDI GDGKDVNLEK HPRSVLQKQC IRYLGPMERE AYEVIVEDGR LMYKQGMTLI NSTEEAKSIF VLSTTRNLYV
301: GIKKKGLFQH SSFLSGGATT AAGRLVARDG ILEAIWPYSG HYLPTEDNFK EFISFLEEHN VDLTNVKRCS VNEEYSSFKS TADEEEERKE VSEEVEIPSE
401: KEERARPVFD PVKRLSCKWT SGYGPRIGCV RDYPMELQAQ ALEQVSLSPR VSPANSYGPI PSPRPSPKVR VSPRLAYMGI PSPRAVKC
101: RPVTELDAAA TTLQKVYKSY RTRRNLADCA VVVEELWWRT LEGAALDLSS VSFFGEEKHE TAVSKWARAR KRAAKVGKGL SKDEKAQKLA LQHWLEAIDP
201: RHRYGHNLHF YYDVWSASKS TQPFFYWLDI GDGKDVNLEK HPRSVLQKQC IRYLGPMERE AYEVIVEDGR LMYKQGMTLI NSTEEAKSIF VLSTTRNLYV
301: GIKKKGLFQH SSFLSGGATT AAGRLVARDG ILEAIWPYSG HYLPTEDNFK EFISFLEEHN VDLTNVKRCS VNEEYSSFKS TADEEEERKE VSEEVEIPSE
401: KEERARPVFD PVKRLSCKWT SGYGPRIGCV RDYPMELQAQ ALEQVSLSPR VSPANSYGPI PSPRPSPKVR VSPRLAYMGI PSPRAVKC
Arabidopsis Description
EDA39calmodulin-binding family protein [Source:TAIR;Acc:AT4G33050]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.