Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- nucleus 3
- endoplasmic reticulum 5
- extracellular 3
- vacuole 3
- plasma membrane 3
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P09200_001 | Banana | cytosol, extracellular, nucleus, plastid | 66.34 | 67.25 |
| GSMUA_Achr4P09170_001 | Banana | cytosol | 54.16 | 57.61 |
| GSMUA_Achr6P04920_001 | Banana | endoplasmic reticulum, vacuole | 56.87 | 56.87 |
| GSMUA_Achr8P24930_001 | Banana | cytosol | 40.62 | 54.55 |
| GSMUA_Achr4P08700_001 | Banana | extracellular, nucleus, plastid, vacuole | 55.13 | 53.17 |
| GSMUA_Achr3P25890_001 | Banana | mitochondrion | 52.61 | 52.51 |
| GSMUA_Achr8P05470_001 | Banana | plastid | 50.68 | 52.51 |
| GSMUA_Achr8P26270_001 | Banana | plastid | 48.74 | 52.5 |
| GSMUA_Achr6P05460_001 | Banana | cytosol | 55.13 | 52.39 |
| TraesCS1A01G125400.1 | Wheat | nucleus | 48.74 | 48.74 |
| Os05t0197300-01 | Rice | cytosol | 52.03 | 48.38 |
| KXG21506 | Sorghum | cytosol | 51.06 | 47.4 |
| Zm00001d037759_P002 | Maize | mitochondrion | 50.29 | 46.93 |
| GSMUA_Achr3P03060_001 | Banana | cytosol | 34.43 | 46.6 |
| GSMUA_Achr6P01520_001 | Banana | cytosol | 21.28 | 46.41 |
| TraesCS1D01G128400.2 | Wheat | nucleus | 49.9 | 46.32 |
| TraesCS1B01G143800.1 | Wheat | cytosol | 49.13 | 43.79 |
| GSMUA_Achr4P06580_001 | Banana | cytosol | 44.87 | 42.88 |
| HORVU1Hr1G028900.11 | Barley | cytosol, mitochondrion, nucleus | 50.1 | 42.53 |
| GSMUA_Achr4P13570_001 | Banana | cytosol | 44.29 | 42.1 |
| GSMUA_Achr6P01560_001 | Banana | mitochondrion | 20.31 | 39.33 |
| GSMUA_Achr9P21650_001 | Banana | plastid, vacuole | 43.13 | 39.26 |
| GSMUA_Achr6P13300_001 | Banana | cytosol | 37.14 | 38.79 |
| GSMUA_Achr4P11190_001 | Banana | cytosol | 42.75 | 37.71 |
| GSMUA_Achr3P29200_001 | Banana | cytosol | 42.94 | 34.69 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, plastid | 36.56 | 33.75 |
| CDX80650 | Canola | extracellular | 5.22 | 31.03 |
| GSMUA_Achr3P32310_001 | Banana | endoplasmic reticulum | 51.84 | 29.74 |
| GSMUA_Achr6P01510_001 | Banana | nucleus | 11.03 | 27.54 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr10P28010_001 | EnsemblPlants:GSMUA_Achr10T28010_001 | EnsemblPlantsGene:GSMUA_Achr10G28010_001 | PANTHER:PTHR31250 | PANTHER:PTHR31250:SF25 | SignalP:SignalP-noTM |
| UniParc:UPI00029516C7 | UniProt:M0RM25 | MapMan:35.1 | : | : | : |
Description
calmodulin-binding protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr10G28010_001]
Coordinates
chr10:-:30928047..30930860
Molecular Weight (calculated)
58314.9 Da
IEP (calculated)
8.070
GRAVY (calculated)
-0.537
Length
517 amino acids
Sequence
(BLAST)
(BLAST)
001: MGIFVSLLWF TWIELMRSKI FDLAEEVENV RSLSSMEKDV KRIPGSNSCK QNESETSTKS NQIGNDADLK LNPENCLLES LKLIKDLDAA AVKLQKVYKS
101: YRTRRNLADC AVVVEELWWK AFDFASLKHS SISFFGGTKP ETAASRWARA LTRAAKVGKG LSKNNKAQKL ALQHWLEAYL LGDSQIPRRT SSGTNSCGAN
201: ELSSHDSAMN NRYCLRFQID PRHRYGHNLH LYYDEWFISE SKQPFFYWLD IGDGKEVNLA KCPRNKLHQE CVNYLGPKER QAYEVNLESG KFVYKQSGTF
301: VDTTEGSKWI FVLSTISTLY VGQKMKGSFH HSSFLAGGAT IAAGRLIVKE GILKVVWPYS GHYLPTEENF KEFISFLQDN NVDLTDVQKC PAGDDDDYSS
401: LKMDRRNQSE NEVEEGHLCS SIPEDSNVET TSGSVDHHHQ NCTTGAGHRI RCVRKYPTDL QFKALEQVNL SPSSTAPPDE PIVSPRPNSD MRLSPTLAGI
501: SLPAPTITLT LPKHRRR
101: YRTRRNLADC AVVVEELWWK AFDFASLKHS SISFFGGTKP ETAASRWARA LTRAAKVGKG LSKNNKAQKL ALQHWLEAYL LGDSQIPRRT SSGTNSCGAN
201: ELSSHDSAMN NRYCLRFQID PRHRYGHNLH LYYDEWFISE SKQPFFYWLD IGDGKEVNLA KCPRNKLHQE CVNYLGPKER QAYEVNLESG KFVYKQSGTF
301: VDTTEGSKWI FVLSTISTLY VGQKMKGSFH HSSFLAGGAT IAAGRLIVKE GILKVVWPYS GHYLPTEENF KEFISFLQDN NVDLTDVQKC PAGDDDDYSS
401: LKMDRRNQSE NEVEEGHLCS SIPEDSNVET TSGSVDHHHQ NCTTGAGHRI RCVRKYPTDL QFKALEQVNL SPSSTAPPDE PIVSPRPNSD MRLSPTLAGI
501: SLPAPTITLT LPKHRRR
001: MGLSLSLLLS AWKEVVTTQF FSFKNPVESF LETRSFSLKL KEGGLTSRTN SFKSENPQEK SPKTGMERSL SFNSWEIVTE VETEPMNKED EEIVEPTKPA
101: RNSLNGRNCE RIQITKPTIT PPTPFVFFSP RPVTELDAAA TTLQKVYKSY RTRRNLADCA VVVEELWWKT LDAAALNLSS VAFFEEEKHE TAVSKWARAR
201: TRAAKVGKGL SKDEKAQKLA LQHWLEAIDP RHRYGHNLHF YYDVWSASMS AQPFFYWLDI GDGKDVNLEH HPRSVLQKQC IKYLGPLERE AYEVIVEDGK
301: LMNKQSMTLI NSTEDSKSIF VLSTTRTLYV GQKKKGRFQH SSFLSGGATT AAGRLVAREG ILEAIWPYSG HYLPTEDNFN EFISFLEENN VDMTNVKRCS
401: VNEEYSSFNS SGYEEEATKE EEAEKKPAET IVTEEQEEEK ERERPVFQLA KRLSCKWNSG VGPRIGCVRD YPMELQSQAF EQVSLSPRIS PGSTRFPSPY
501: GPIPSPRPSP RVRVSPRLAY MGIPSPRVQV NC
101: RNSLNGRNCE RIQITKPTIT PPTPFVFFSP RPVTELDAAA TTLQKVYKSY RTRRNLADCA VVVEELWWKT LDAAALNLSS VAFFEEEKHE TAVSKWARAR
201: TRAAKVGKGL SKDEKAQKLA LQHWLEAIDP RHRYGHNLHF YYDVWSASMS AQPFFYWLDI GDGKDVNLEH HPRSVLQKQC IKYLGPLERE AYEVIVEDGK
301: LMNKQSMTLI NSTEDSKSIF VLSTTRTLYV GQKKKGRFQH SSFLSGGATT AAGRLVAREG ILEAIWPYSG HYLPTEDNFN EFISFLEENN VDMTNVKRCS
401: VNEEYSSFNS SGYEEEATKE EEAEKKPAET IVTEEQEEEK ERERPVFQLA KRLSCKWNSG VGPRIGCVRD YPMELQSQAF EQVSLSPRIS PGSTRFPSPY
501: GPIPSPRPSP RVRVSPRLAY MGIPSPRVQV NC
Arabidopsis Description
IQM4IQ domain-containing protein IQM4 [Source:UniProtKB/Swiss-Prot;Acc:O64851]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.