Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d037759_P002 | Maize | mitochondrion | 83.66 | 84.12 |
| TraesCS1A01G125400.1 | Wheat | nucleus | 67.33 | 72.53 |
| Os05t0197300-01 | Rice | cytosol | 69.84 | 69.96 |
| TraesCS1D01G128400.2 | Wheat | nucleus | 69.84 | 69.84 |
| TraesCS1B01G143800.1 | Wheat | cytosol | 69.48 | 66.72 |
| HORVU1Hr1G028900.11 | Barley | cytosol, mitochondrion, nucleus | 67.86 | 62.07 |
| GSMUA_Achr6P04920_001 | Banana | endoplasmic reticulum, vacuole | 52.6 | 56.67 |
| GSMUA_Achr7P09200_001 | Banana | cytosol, extracellular, nucleus, plastid | 49.73 | 54.31 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum | 47.4 | 51.06 |
| EES09264 | Sorghum | cytosol | 35.55 | 43.52 |
| EES03151 | Sorghum | mitochondrion, plastid | 44.88 | 43.4 |
| EES16640 | Sorghum | cytosol | 35.01 | 43.14 |
| EER92212 | Sorghum | cytosol | 42.91 | 41.64 |
| EES18807 | Sorghum | plastid | 42.73 | 41.39 |
| EES09263 | Sorghum | cytosol | 32.14 | 39.43 |
| EER97603 | Sorghum | nucleus | 42.37 | 37.28 |
| CDX80650 | Canola | extracellular | 5.75 | 36.78 |
| KXG40105 | Sorghum | cytosol | 40.93 | 35.79 |
| EER94258 | Sorghum | cytosol | 42.91 | 35.57 |
Protein Annotations
| EnsemblPlants:KXG21506 | EnsemblPlantsGene:SORBI_3009G072900 | EntrezGene:8065910 | PANTHER:PTHR31250 | PANTHER:PTHR31250:SF1 | ProteinID:KXG21506 |
| ProteinID:KXG21506.1 | SEG:seg | UniParc:UPI00081AE211 | UniProt:A0A1B6P746 | MapMan:35.1 | : |
Description
hypothetical protein
Coordinates
chr9:-:8930324..8932849
Molecular Weight (calculated)
62009.1 Da
IEP (calculated)
7.467
GRAVY (calculated)
-0.593
Length
557 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLYHNEWAE ALGIEISSPR AKDGTMVVNG TCFSKGKLMP SLSFKLWEAE AVVASMDHEH DSSRRSECCL SLKDDSDLVF MATPTSPRVS STSPKCELDA
101: AAVKLQKVYK SYRTRRNLAD CAVVIEELWW KALDFASLKH SSVSFFNGGK PETAASRWAR ARTRVAKLGK GLSKNGKAQK LARQHWLEAI DPRHRYGHNL
201: HIYYDVWSKS ESTEPFFYWL DIGEGKEVNL EKCPRSKLQS QCIKYLGPKE RQEYEVVVER GKFVYKKNGD LVHTLDDSKW IFVLSTTKAL YVGQKKKGSF
301: QHSSFLAGGA ITSAGRLVVK EGILKAIWPY SGHYLPTEEN FKDFIRYLEE NGVDLTHVKV HKCPLDKDDE YPLLSKPEAQ PNAAVSKGSD GAEPNMASAA
401: MDEHTTDSDA ADGDVHRATV DGNMSEAEED DTDTHAHTDI DTEEEAQQHE LPLPPSNGAA AGAELGKNHL TCRWSTGTGP RIRCVRDYPQ DLQSRALEHV
501: NLSPRLAGSP PSRKRDPVPS PRPSPAMILS PRLASVGFQP QTVVSLTLPD FKRSRLQ
101: AAVKLQKVYK SYRTRRNLAD CAVVIEELWW KALDFASLKH SSVSFFNGGK PETAASRWAR ARTRVAKLGK GLSKNGKAQK LARQHWLEAI DPRHRYGHNL
201: HIYYDVWSKS ESTEPFFYWL DIGEGKEVNL EKCPRSKLQS QCIKYLGPKE RQEYEVVVER GKFVYKKNGD LVHTLDDSKW IFVLSTTKAL YVGQKKKGSF
301: QHSSFLAGGA ITSAGRLVVK EGILKAIWPY SGHYLPTEEN FKDFIRYLEE NGVDLTHVKV HKCPLDKDDE YPLLSKPEAQ PNAAVSKGSD GAEPNMASAA
401: MDEHTTDSDA ADGDVHRATV DGNMSEAEED DTDTHAHTDI DTEEEAQQHE LPLPPSNGAA AGAELGKNHL TCRWSTGTGP RIRCVRDYPQ DLQSRALEHV
501: NLSPRLAGSP PSRKRDPVPS PRPSPAMILS PRLASVGFQP QTVVSLTLPD FKRSRLQ
001: MGLSLSLLLS AWKEVVTTQF FSFKNPVESF LETRSFSLKL KEGGLTSRTN SFKSENPQEK SPKTGMERSL SFNSWEIVTE VETEPMNKED EEIVEPTKPA
101: RNSLNGRNCE RIQITKPTIT PPTPFVFFSP RPVTELDAAA TTLQKVYKSY RTRRNLADCA VVVEELWWKT LDAAALNLSS VAFFEEEKHE TAVSKWARAR
201: TRAAKVGKGL SKDEKAQKLA LQHWLEAIDP RHRYGHNLHF YYDVWSASMS AQPFFYWLDI GDGKDVNLEH HPRSVLQKQC IKYLGPLERE AYEVIVEDGK
301: LMNKQSMTLI NSTEDSKSIF VLSTTRTLYV GQKKKGRFQH SSFLSGGATT AAGRLVAREG ILEAIWPYSG HYLPTEDNFN EFISFLEENN VDMTNVKRCS
401: VNEEYSSFNS SGYEEEATKE EEAEKKPAET IVTEEQEEEK ERERPVFQLA KRLSCKWNSG VGPRIGCVRD YPMELQSQAF EQVSLSPRIS PGSTRFPSPY
501: GPIPSPRPSP RVRVSPRLAY MGIPSPRVQV NC
101: RNSLNGRNCE RIQITKPTIT PPTPFVFFSP RPVTELDAAA TTLQKVYKSY RTRRNLADCA VVVEELWWKT LDAAALNLSS VAFFEEEKHE TAVSKWARAR
201: TRAAKVGKGL SKDEKAQKLA LQHWLEAIDP RHRYGHNLHF YYDVWSASMS AQPFFYWLDI GDGKDVNLEH HPRSVLQKQC IKYLGPLERE AYEVIVEDGK
301: LMNKQSMTLI NSTEDSKSIF VLSTTRTLYV GQKKKGRFQH SSFLSGGATT AAGRLVAREG ILEAIWPYSG HYLPTEDNFN EFISFLEENN VDMTNVKRCS
401: VNEEYSSFNS SGYEEEATKE EEAEKKPAET IVTEEQEEEK ERERPVFQLA KRLSCKWNSG VGPRIGCVRD YPMELQSQAF EQVSLSPRIS PGSTRFPSPY
501: GPIPSPRPSP RVRVSPRLAY MGIPSPRVQV NC
Arabidopsis Description
IQM4IQ domain-containing protein IQM4 [Source:UniProtKB/Swiss-Prot;Acc:O64851]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.