CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d032981_P001	Maize	cytosol	86.46	88.57
Os10t0411500-01	Rice	plasma membrane	73.66	76.27
KXG40105	Sorghum	cytosol	55.06	58.08
EER92212	Sorghum	cytosol	48.51	56.79
VIT_08s0007g07190.t01	Wine grape	cytosol	41.37	52.16
Bra021491.1-P	Field mustard	nucleus	38.24	52.13
EES09264	Sorghum	cytosol	33.04	48.79
Bra027414.1-P	Field mustard	nucleus	41.37	48.26
KRH71773	Soybean	nucleus	40.18	48.21
EER97603	Sorghum	nucleus	45.39	48.18
KRG97321	Soybean	nucleus	39.58	47.59
EES16640	Sorghum	cytosol	31.85	47.35
Solyc01g044420.2.1	Tomato	nucleus	40.33	47.05
PGSC0003DMT400080788	Potato	nucleus	37.8	46.61
Bra001512.1-P	Field mustard	cytosol	36.46	46.31
AT3G13600.1	Thale cress	nucleus	41.67	46.28
KRH38004	Soybean	cytosol	40.92	46.22
Bra014570.1-P	Field mustard	nucleus	38.24	45.65
KRH58931	Soybean	nucleus	44.05	45.12
AT3G58480.1	Thale cress	nucleus	38.54	45.04
KRH42833	Soybean	cytosol	44.05	44.78
EES09263	Sorghum	cytosol	29.76	44.05
Solyc10g080640.1.1	Tomato	nucleus	41.22	43.76
VIT_06s0004g00690.t01	Wine grape	nucleus	43.15	43.28
KXG21506	Sorghum	cytosol	35.57	42.91
Solyc10g078650.1.1	Tomato	nucleus	38.24	42.34
Solyc01g005800.2.1	Tomato	nucleus	41.52	42.21
PGSC0003DMT400021529	Potato	cytosol	39.73	41.72
EES18807	Sorghum	plastid	32.14	37.57
EES03151	Sorghum	mitochondrion, plastid	31.99	37.33
PGSC0003DMT400060938	Potato	nucleus, plastid	38.39	36.8

Protein Annotations

EnsemblPlants:EER94258	EnsemblPlantsGene:SORBI_3001G251500	EntrezGene:8064928	PANTHER:PTHR31250	PANTHER:PTHR31250:SF11	ProteinID:EER94258
ProteinID:EER94258.1	RefSeq:XP_002467260.1	SEG:seg	UniParc:UPI0001A83338	UniProt:C5WM63	MapMan:35.1

Description

hypothetical protein

Coordinates

chr1:-:27157607..27161128

Molecular Weight (calculated)

74739.2 Da

IEP (calculated)

7.682

GRAVY (calculated)

-0.587

Length

672 amino acids

Sequence
(BLAST)

001: MGLSISYPPD DYLPAVEDNM GRLFIRSLSF DDMEADAESP LSSPSTSPSA LPPAFASGKL IIEGSLSFKR READSIPMQN VLSIRSPKPP DREACNIICA
101: GAATATCGSS RFGPIGDRPP DFDYPMVGMD SPKHQAAAVR LQKVYKSFRT RRQLADCAVL VEQRWWKLLD FALLKRNSVS FFDIEKPETA VSKWSRARMR
201: AAKVGKGLSK DEKAQKLALQ HWLEAIDPRH RYGHNLHFYY HRWLHCQSKQ PFFYWLDVGE GKDVNLEEHC CRSKLHKQCI KYLGPKEREN YEVIVEDKRL
301: MYKLSRQIVD TTGSAKGTKW IFVLSTCKTL YIGQKQKGVF QHSSFLAGGA TSAAGRLVVE DGILKAVWPH SGHYRPTEQN FQEFMNFLKD RSVELTDVKL
401: SPSEGEEDGD FSLRGSHSQL DLTQLCQQEE SHGEQEAESD QRHGNAEAEA ETCSHDEATS TETCSTPSPA TATTMRKSSS DNRLQGKRPP RLLISSNNNI
501: APLPPTAHSS SGGGNAGRAP SPGVKDVEPD SAMLGECLDF CKRNLFAEDG GYEDQYLDDL AEVPEALILS RINSKRAMHS YQLGKQLHFH WSTGAGPRIG
601: CVRDYPSELQ FRALEEVSLS PRGRPPRFPS PRPGALTPNS IPAAKCGSLM AEGDGMHVSL KPRQRSATWT AF

Best Arabidopsis Sequence Match ( AT3G13600.2 )
(BLAST)

001: MGVSFSCPFA EQDDVEAALD SVTVKSISFG DDDECKTPKR SVNFNDGTLE PTILKSMGSG KMVVEKSVSL KGMQLERMIS LNRSVKDNGF EIAKEFSVLD
101: PRNPKHEAAI KLQKVYKSFR TRRKLADCAV LVEQSWWKLL DFAELKRSSI SFFDIEKHET AISRWSRART RAAKVGKGLS KNGKAQKLAL QHWLEAIDPR
201: HRYGHNLHFY YNKWLHCQSR EPFFYWLDIG EGKEVNLVEK CPRLKLQQQC IKYLGPMERK AYEVVVEDGK FFYKHSGEIL QTSDMEDSES KWIFVLSTSK
301: VLYVGKKKKG TFQHSSFLAG GATVAAGRLV VENGVLKAVW PHSGHYQPTE ENFMDFLSFL RENDVDITDV KMSPTDEDEF SIYKQRSTHM RNHSLEEDLE
401: AEKTISFQDK VDPSGEEQTL MRNESISRKQ SDLETPEKME SFSTFGDEIQ SVGSKSTKVS EDYDSGDDEE EEEEMFELEQ ESMPSEQSSP RGEEKEEGET
501: KESEVVKITE ESILKRINSK KETKSFQLGK QLSCKWTTGA GPRIGCVRDY PSELQFQALE QVNLSPRSAS VSRLCFSSSS QTQTPQMSPL WRGMSLPTDI
601: TLTNS

Arabidopsis Description

IQM2Calmodulin-binding family protein [Source:UniProtKB/TrEMBL;Acc:A0A178VF87]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.