CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d035377_P001	Maize	cytosol	81.72	85.09
EES09264	Sorghum	cytosol	68.28	68.13
EES16640	Sorghum	cytosol	66.52	66.81
Os11t0151002-00	Rice	cytosol	62.33	59.7
GSMUA_Achr3P03060_001	Banana	cytosol	44.93	53.4
CDY13342	Canola	cytosol	53.52	53.29
CDX67541	Canola	cytosol	53.52	53.29
Bra028537.1-P	Field mustard	cytosol	53.3	53.07
AT3G52870.1	Thale cress	cytosol	53.08	52.85
CDY13341	Canola	cytosol	20.7	51.93
VIT_13s0074g00760.t01	Wine grape	nucleus	51.1	51.9
CDX95381	Canola	cytosol	51.54	51.32
CDX76252	Canola	cytosol	51.54	51.32
Bra019642.1-P	Field mustard	cytosol	51.1	50.88
Solyc10g083360.1.1	Tomato	cytosol	51.76	50.43
PGSC0003DMT400072375	Potato	cytosol	51.32	50.0
Solyc10g085610.1.1	Tomato	cytosol	47.8	49.89
VIT_08s0007g03630.t01	Wine grape	cytosol	51.32	49.79
KRH30882	Soybean	cytosol	51.76	49.58
KRH32680	Soybean	cytosol	52.42	49.28
KRG96176	Soybean	plastid	49.78	48.39
GSMUA_Achr6P13300_001	Banana	cytosol	51.98	47.68
PGSC0003DMT400022916	Potato	cytosol	52.64	45.96
Solyc09g009770.2.1	Tomato	nucleus	51.54	44.57
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plastid	51.76	41.96
KRH67885	Soybean	cytosol	32.6	41.57
EER92212	Sorghum	cytosol	43.17	34.15
KXG21506	Sorghum	cytosol	39.43	32.14
EER97603	Sorghum	nucleus	43.17	30.96
KXG40105	Sorghum	cytosol	43.17	30.77
EER94258	Sorghum	cytosol	44.05	29.76
EES03151	Sorghum	mitochondrion, plastid	37.22	29.34
EES18807	Sorghum	plastid	37.0	29.22

Protein Annotations

EnsemblPlants:EES09263	EnsemblPlantsGene:SORBI_3005G036600	EntrezGene:8070628	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR31250	PANTHER:PTHR31250:SF10	PFscan:PS50096	ProteinID:EES09263
ProteinID:EES09263.1	RefSeq:XP_002450275.1	SEG:seg	unigene:Sbi.20236	UniParc:UPI0001A8682B	UniProt:C5Y4N0
MapMan:35.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr5:-:3335433..3340814

Molecular Weight (calculated)

50340.6 Da

IEP (calculated)

8.366

GRAVY (calculated)

-0.510

Length

454 amino acids

Sequence
(BLAST)

001: MEAAPAALRR PAGSDDAADP PRCPPAPAAA GSGAMSGGAA TKLQKVYRSY RTRRRLADSA VVVEELWWKA LDFARLNYNT ISFFDEPKPK TAASHWNRIS
101: QNALKVGHGL SRDAKALKLA FEHWIEAIDS RHRSGHNLHF YYNLWCQSQA GQPFFYWLDV GDGKDVDLPE CPRTLLKKQC IRYLGPKERE LYEYIINEGK
201: ITHKQSGVPL DTSHGPKGAY WIFVMSTTRR LYAGKKEKGV FQHSSFLAGG ATIAAGKFTV QAGVIKSICA YSGHYKPSIE DLNNFMKFLE ENGVNVKEIE
301: MRPFTKGDYH DDSMPNETQN VVVDTNTSQV VLSVDTKEDD EGKDSPTEQA KLTYCRNLSG GLHSAKDTNV SQKAILERIK SKSESESYQL GLKLSLKWST
401: GAGPRIGCVK DYPTELRIQA LEMVDLLAGA STVPHTPLLA QAQECHDPAS RLEA

Best Arabidopsis Sequence Match ( AT3G52870.1 )
(BLAST)

001: MQVVSSFDFQ SSPFSHGAGE ILISPVDHRE LSSHGDALEG ACDDSTRLAA VKVQKVYRSY RTRRRLADSV VVAEELWWQA MDYARLNHST ISFFDYSRPE
101: TAVSRWNRVS LNASKVGKGL SIVDKAQKLA FQHWIEAIDP RHRYGHNLHK YYEEWCKADA GQPFFYWLDV GGGIDLDLNE CPRSKLKQQC IRYLGPQERE
201: EYEYVIIEGK IVHKLTGKFL HTMHGSEGTK WIFVMSTFKK LYAGLKKKGR FHHSSFLAGG ATLAAGRVIV DNGVLKTISA YSGHYRPSDD SLDTFLGFLR
301: ENAVNLDNVE VHKASEDSDS YDDYVKSNGG SEPEPLKKED TTFQAETETD ENGNGTVGTL EEAKRSSYQR TLSGGLGSPK ANVPQKSMLL RINSKKQSRS
401: LQLGHQLSLK WSTGVGPRIG CAADYPVQLR TQALEFVNLS PKYRSSRLSP TGKLDV

Arabidopsis Description

IQM3IQ domain-containing protein IQM3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFA4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.