Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400072375 | Potato | cytosol | 94.42 | 94.42 |
| Solyc10g085610.1.1 | Tomato | cytosol | 63.95 | 68.51 |
| KRH30882 | Soybean | cytosol | 62.23 | 61.18 |
| KRG96176 | Soybean | plastid | 61.16 | 61.03 |
| Bra028537.1-P | Field mustard | cytosol | 59.23 | 60.53 |
| CDX67541 | Canola | cytosol | 59.23 | 60.53 |
| CDY13342 | Canola | cytosol | 59.23 | 60.53 |
| KRH32680 | Soybean | cytosol | 62.66 | 60.46 |
| Bra019642.1-P | Field mustard | cytosol | 58.37 | 59.65 |
| AT3G52870.1 | Thale cress | cytosol | 58.15 | 59.43 |
| Solyc09g009770.2.1 | Tomato | nucleus | 66.74 | 59.24 |
| CDX95381 | Canola | cytosol | 57.94 | 59.21 |
| CDX76252 | Canola | cytosol | 57.94 | 59.21 |
| CDY13341 | Canola | cytosol | 22.96 | 59.12 |
| VIT_08s0007g03630.t01 | Wine grape | cytosol | 58.58 | 58.33 |
| EES09264 | Sorghum | cytosol | 55.15 | 56.48 |
| GSMUA_Achr3P03060_001 | Banana | cytosol | 46.14 | 56.28 |
| Zm00001d052525_P001 | Maize | cytosol | 54.51 | 54.27 |
| TraesCS5A01G129600.1 | Wheat | cytosol | 53.65 | 54.23 |
| EES16640 | Sorghum | cytosol | 52.36 | 53.98 |
| HORVU6Hr1G019510.4 | Barley | cytosol | 55.36 | 53.97 |
| Os12t0149900-01 | Rice | cytosol | 54.72 | 53.46 |
| Zm00001d035377_P001 | Maize | cytosol | 49.79 | 53.21 |
| TraesCS5D01G137100.1 | Wheat | cytosol | 54.72 | 53.12 |
| HORVU5Hr1G041930.15 | Barley | cytosol | 54.94 | 53.0 |
| TraesCS6B01G137500.1 | Wheat | cytosol | 54.94 | 53.0 |
| GSMUA_Achr6P13300_001 | Banana | cytosol | 56.22 | 52.93 |
| TraesCS5B01G128200.1 | Wheat | cytosol | 54.51 | 52.92 |
| TraesCS6D01G097300.1 | Wheat | cytosol | 54.94 | 52.89 |
| TraesCS6A01G108900.1 | Wheat | cytosol | 54.94 | 52.78 |
| Zm00001d004916_P001 | Maize | cytosol | 41.42 | 52.59 |
| Os11t0151002-00 | Rice | cytosol | 52.79 | 51.9 |
| EES09263 | Sorghum | cytosol | 50.43 | 51.76 |
| TraesCS6D01G093400.1 | Wheat | cytosol | 52.58 | 51.04 |
| Solyc03g121770.1.1 | Tomato | cytosol | 29.18 | 50.94 |
| TraesCS6B01G133900.1 | Wheat | cytosol | 51.72 | 50.52 |
| KRH67885 | Soybean | cytosol | 36.91 | 48.31 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, plastid | 54.94 | 45.71 |
| TraesCS6A01G104600.1 | Wheat | nucleus | 25.32 | 43.38 |
| Solyc07g040710.2.1 | Tomato | cytosol | 41.2 | 41.2 |
| Solyc12g008960.1.1 | Tomato | nucleus | 42.49 | 40.16 |
| Solyc01g044420.2.1 | Tomato | nucleus | 44.85 | 36.28 |
| Solyc10g078650.1.1 | Tomato | nucleus | 42.06 | 32.29 |
| Solyc01g005800.2.1 | Tomato | nucleus | 45.28 | 31.92 |
| Solyc10g080640.1.1 | Tomato | nucleus | 42.92 | 31.6 |
| Solyc08g062930.1.1 | Tomato | cytosol | 25.54 | 30.51 |
Protein Annotations
| EnsemblPlants:Solyc10g083360.1.1 | EnsemblPlantsGene:Solyc10g083360.1 | PANTHER:PTHR31250 | PANTHER:PTHR31250:SF10 | SEG:seg | UniParc:UPI0002769DAC |
| UniProt:K4D3C3 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr10:+:63201463..63205792
Molecular Weight (calculated)
52204.5 Da
IEP (calculated)
8.617
GRAVY (calculated)
-0.606
Length
466 amino acids
Sequence
(BLAST)
(BLAST)
001: MEFETHVPSC FDLTSQSPIN SFLDTNFTNG RECQWSDSAG DVIPADTPTK LHAKAAKTVQ KVYRSYRTRR MLADSALVAE ELWWQALDYA RLNHSTISFF
101: NVPQPETAVS RWNRITINAS KVGKGLSRDG KAQKLAFQHW IEAIDPRHRY GHNLHTYYQE WCKTDAGQPF FYWLDLGDGK KVELKECPRS KLQKQSIKYL
201: GPQEREHYEY VVAEGKILHN LTGNHLDTTN GLPGAKWIFV MSTSKRLYAG EKKKGIFHHS SFLAGGATLA AGRLVVKDGI LKSISAYSGH YRPTDDSLNS
301: FLSFLKENGV NLDEAEIKKP RDDDESYEEG KSSESNSASD LSTISESLQI DLPKEEEKDL SGLVINPQAE KASNNYKRTL SGGLESPRAE VPKTAILQRI
401: NSKKLSKSYQ LGHQLSLAWS TGAGPRIGCI NDYPVELREQ ALELTHLSPR PRSASSTPRP IAAMVL
101: NVPQPETAVS RWNRITINAS KVGKGLSRDG KAQKLAFQHW IEAIDPRHRY GHNLHTYYQE WCKTDAGQPF FYWLDLGDGK KVELKECPRS KLQKQSIKYL
201: GPQEREHYEY VVAEGKILHN LTGNHLDTTN GLPGAKWIFV MSTSKRLYAG EKKKGIFHHS SFLAGGATLA AGRLVVKDGI LKSISAYSGH YRPTDDSLNS
301: FLSFLKENGV NLDEAEIKKP RDDDESYEEG KSSESNSASD LSTISESLQI DLPKEEEKDL SGLVINPQAE KASNNYKRTL SGGLESPRAE VPKTAILQRI
401: NSKKLSKSYQ LGHQLSLAWS TGAGPRIGCI NDYPVELREQ ALELTHLSPR PRSASSTPRP IAAMVL
001: MQVVSSFDFQ SSPFSHGAGE ILISPVDHRE LSSHGDALEG ACDDSTRLAA VKVQKVYRSY RTRRRLADSV VVAEELWWQA MDYARLNHST ISFFDYSRPE
101: TAVSRWNRVS LNASKVGKGL SIVDKAQKLA FQHWIEAIDP RHRYGHNLHK YYEEWCKADA GQPFFYWLDV GGGIDLDLNE CPRSKLKQQC IRYLGPQERE
201: EYEYVIIEGK IVHKLTGKFL HTMHGSEGTK WIFVMSTFKK LYAGLKKKGR FHHSSFLAGG ATLAAGRVIV DNGVLKTISA YSGHYRPSDD SLDTFLGFLR
301: ENAVNLDNVE VHKASEDSDS YDDYVKSNGG SEPEPLKKED TTFQAETETD ENGNGTVGTL EEAKRSSYQR TLSGGLGSPK ANVPQKSMLL RINSKKQSRS
401: LQLGHQLSLK WSTGVGPRIG CAADYPVQLR TQALEFVNLS PKYRSSRLSP TGKLDV
101: TAVSRWNRVS LNASKVGKGL SIVDKAQKLA FQHWIEAIDP RHRYGHNLHK YYEEWCKADA GQPFFYWLDV GGGIDLDLNE CPRSKLKQQC IRYLGPQERE
201: EYEYVIIEGK IVHKLTGKFL HTMHGSEGTK WIFVMSTFKK LYAGLKKKGR FHHSSFLAGG ATLAAGRVIV DNGVLKTISA YSGHYRPSDD SLDTFLGFLR
301: ENAVNLDNVE VHKASEDSDS YDDYVKSNGG SEPEPLKKED TTFQAETETD ENGNGTVGTL EEAKRSSYQR TLSGGLGSPK ANVPQKSMLL RINSKKQSRS
401: LQLGHQLSLK WSTGVGPRIG CAADYPVQLR TQALEFVNLS PKYRSSRLSP TGKLDV
Arabidopsis Description
IQM3IQ domain-containing protein IQM3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFA4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.