Factsheet for Solyc10g080640.1.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400060938	Potato	nucleus, plastid	92.26	83.31
Solyc10g078650.1.1	Tomato	nucleus	60.51	63.1
VIT_08s0007g07190.t01	Wine grape	cytosol	48.82	57.97
Solyc03g121770.1.1	Tomato	cytosol	23.38	55.43
KRH71773	Soybean	nucleus	47.24	53.39
HORVU2Hr1G015200.2	Barley	cytosol	33.18	52.5
CDX88987	Canola	nucleus	45.66	52.36
GSMUA_Achr6P01520_001	Banana	cytosol	19.59	52.32
CDY00568	Canola	nucleus	45.97	51.96
HORVU4Hr1G074540.1	Barley	cytosol	20.54	51.79
HORVU1Hr1G045060.3	Barley	nucleus	30.02	51.49
Bra014570.1-P	Field mustard	nucleus	45.66	51.33
AT3G58480.1	Thale cress	nucleus	46.6	51.3
KRH38004	Soybean	cytosol	48.18	51.26
GSMUA_Achr4P13570_001	Banana	cytosol	43.44	50.55
Solyc01g044420.2.1	Tomato	nucleus	45.97	50.52
GSMUA_Achr4P06580_001	Banana	cytosol	42.97	50.28
Zm00001d047402_P001	Maize	cytosol	42.02	49.44
TraesCS5A01G375700.1	Wheat	cytosol	41.71	49.44
TraesCS5B01G377900.1	Wheat	cytosol	41.71	49.07
GSMUA_Achr9P21650_001	Banana	plastid, vacuole	43.6	48.59
Os03t0374500-00	Rice	nucleus	44.23	48.53
Solyc07g040710.2.1	Tomato	cytosol	35.7	48.5
TraesCS2A01G154900.1	Wheat	cytosol	42.65	47.87
TraesCS2D01G160200.1	Wheat	cytosol	43.13	47.81
HORVU7Hr1G052820.45	Barley	cytosol	18.64	47.77
TraesCS2B01G180000.1	Wheat	cytosol	43.13	47.73
Solyc12g008960.1.1	Tomato	nucleus	37.12	47.67
HORVU2Hr1G028140.2	Barley	cytosol	42.65	47.62
EER92212	Sorghum	cytosol	43.13	47.56
HORVU5Hr1G023670.50	Barley	cytosol	18.48	47.37
HORVU2Hr1G074420.1	Barley	cytosol	11.06	47.3
Os07t0633400-01	Rice	cytosol	43.6	47.18
HORVU5Hr1G093140.18	Barley	cytosol, nucleus	42.18	46.76
HORVU4Hr1G052500.37	Barley	cytosol, nucleus	18.17	46.56
GSMUA_Achr4P11190_001	Banana	cytosol	42.97	46.42
HORVU2Hr1G028150.1	Barley	cytosol	42.65	45.69
TraesCS4D01G281600.1	Wheat	nucleus	42.5	43.88
TraesCS4A01G021000.1	Wheat	nucleus	42.02	43.61
Solyc01g005800.2.1	Tomato	nucleus	45.5	43.57
TraesCS5D01G385200.2	Wheat	cytosol	38.23	43.45
HORVU4Hr1G074550.4	Barley	cytosol	41.71	43.14
Solyc10g083360.1.1	Tomato	cytosol	31.6	42.92
Os10t0411500-01	Rice	plasma membrane	43.92	42.84
EER97603	Sorghum	nucleus	42.81	42.81
Os03t0167200-01	Rice	plasma membrane	41.23	42.79
Zm00001d032981_P001	Maize	cytosol	43.76	42.23
Solyc10g085610.1.1	Tomato	cytosol	28.91	42.07
Zm00001d027815_P002	Maize	nucleus	42.65	42.06
KXG40105	Sorghum	cytosol	42.02	41.76
EER94258	Sorghum	cytosol	43.76	41.22
GSMUA_Achr6P01560_001	Banana	mitochondrion	17.38	41.2
Zm00001d022245_P001	Maize	cytosol	42.5	40.7
TraesCS4B01G282600.2	Wheat	nucleus	42.18	39.91
GSMUA_Achr3P29200_001	Banana	cytosol	40.13	39.69
HORVU3Hr1G010590.3	Barley	nucleus	17.85	37.79
HORVU5Hr1G120690.3	Barley	nucleus	18.01	37.62
Solyc09g009770.2.1	Tomato	nucleus	30.65	36.95
Solyc08g062930.1.1	Tomato	cytosol	22.59	36.67
GSMUA_Achr6P01510_001	Banana	nucleus	11.37	34.78
Zm00001d024699_P001	Maize	nucleus	17.06	34.18
HORVU2Hr1G074410.1	Barley	cytosol, nucleus	7.11	30.82
HORVU5Hr1G110660.2	Barley	mitochondrion	5.53	28.23
TraesCS2B01G401000.1	Wheat	plastid	14.69	26.8

Protein Annotations

EnsemblPlants:Solyc10g080640.1.1	EnsemblPlantsGene:Solyc10g080640.1	PANTHER:PTHR31250	PANTHER:PTHR31250:SF4	SEG:seg	UniParc:UPI00027695FF
UniProt:K4D2V4	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr10:+:61875962..61878864

Molecular Weight (calculated)

72638.8 Da

IEP (calculated)

6.865

GRAVY (calculated)

-0.706

Length

633 amino acids

Sequence
(BLAST)

001: MGITYSCPFA NFDDSDTKFE SYLVRTLSFG TDATKNALPP INFKDQNPQQ PKMHKSYSSG KMILEGTLSY KRRELEARIG LTSFDNDEKT MSRSDSLMSS
101: EEKHNMPDEN TKMIPFVCEK QRDEAAVKLQ KTYKSFRTRR RLADCAILVE QRWWKLLDSV ELKHSSISFF DIEKPQTAFS RWSRALTRAA KVGKGLSKDE
201: KACKLALQHW LEAIDPRHRY GHNLHFYYTK WLQVDSRQPF FYWLDIGEGK EVNLEKCPRS KLHQQCIKYL GPVEREAYEV VIVDGKFIYK QSGRVLDTRG
301: GPEEAKWIFV LSVSKDLYIG MKQKGTFQHS SFLAGGATLS AGRLVIEDGT LKAVWPHSGH YLPTKENFEE FMTFLEQHNI DVTIIQKFPC DGEESNFCRK
401: EGGLGLRNSL SAPDFSQATE ESNAKCSDRE KTNPTTKYCK DTENPIPLSR PSQVSKPKMV VEIPPREDTF ELFTKAGSTD NTQPLDTPVD GYETAEEYLS
501: DTELSVSKLN LFDDEDEEDY EDTIPPEKIM KRIDTHRRTK SFQLAHQLSC RWTTGAGPRI GCMRDYPAEL QFRVMEDVCL SPRTTTFQTP PKYARPPSIF
601: SIETTEGRRR TGSESSVFFQ STPLVEEMQK YCG

Best Arabidopsis Sequence Match ( AT3G13600.2 )
(BLAST)

001: MGVSFSCPFA EQDDVEAALD SVTVKSISFG DDDECKTPKR SVNFNDGTLE PTILKSMGSG KMVVEKSVSL KGMQLERMIS LNRSVKDNGF EIAKEFSVLD
101: PRNPKHEAAI KLQKVYKSFR TRRKLADCAV LVEQSWWKLL DFAELKRSSI SFFDIEKHET AISRWSRART RAAKVGKGLS KNGKAQKLAL QHWLEAIDPR
201: HRYGHNLHFY YNKWLHCQSR EPFFYWLDIG EGKEVNLVEK CPRLKLQQQC IKYLGPMERK AYEVVVEDGK FFYKHSGEIL QTSDMEDSES KWIFVLSTSK
301: VLYVGKKKKG TFQHSSFLAG GATVAAGRLV VENGVLKAVW PHSGHYQPTE ENFMDFLSFL RENDVDITDV KMSPTDEDEF SIYKQRSTHM RNHSLEEDLE
401: AEKTISFQDK VDPSGEEQTL MRNESISRKQ SDLETPEKME SFSTFGDEIQ SVGSKSTKVS EDYDSGDDEE EEEEMFELEQ ESMPSEQSSP RGEEKEEGET
501: KESEVVKITE ESILKRINSK KETKSFQLGK QLSCKWTTGA GPRIGCVRDY PSELQFQALE QVNLSPRSAS VSRLCFSSSS QTQTPQMSPL WRGMSLPTDI
601: TLTNS

Arabidopsis Description

IQM2Calmodulin-binding family protein [Source:UniProtKB/TrEMBL;Acc:A0A178VF87]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.