Factsheet for GSMUA_Achr9P21650_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, vacuole

Predictor Summary:

nucleus 1
extracellular 3
endoplasmic reticulum 3
vacuole 4
plasma membrane 3
golgi 3
mitochondrion 1
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid, vacuole
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	mitochondrion
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P13570_001	Banana	cytosol	65.85	68.75
GSMUA_Achr4P06580_001	Banana	cytosol	63.73	66.91
GSMUA_Achr4P11190_001	Banana	cytosol	65.49	63.48
GSMUA_Achr6P01520_001	Banana	cytosol	25.18	60.34
Bra021491.1-P	Field mustard	nucleus	47.18	54.36
VIT_08s0007g07190.t01	Wine grape	cytosol	50.53	53.85
GSMUA_Achr3P29200_001	Banana	cytosol	58.98	52.34
GSMUA_Achr8P24930_001	Banana	cytosol	34.86	51.43
Bra027414.1-P	Field mustard	nucleus	50.88	50.17
Solyc01g044420.2.1	Tomato	nucleus	49.82	49.13
KRH71773	Soybean	nucleus	48.42	49.11
GSMUA_Achr8P26270_001	Banana	plastid	41.2	48.75
GSMUA_Achr4P09170_001	Banana	cytosol	41.55	48.56
PGSC0003DMT400080788	Potato	nucleus	46.48	48.44
GSMUA_Achr3P03060_001	Banana	cytosol	32.57	48.43
AT3G58480.1	Thale cress	nucleus	48.94	48.35
Bra014570.1-P	Field mustard	nucleus	47.71	48.13
AT3G13600.1	Thale cress	nucleus	50.88	47.77
GSMUA_Achr6P01560_001	Banana	mitochondrion	22.36	47.57
GSMUA_Achr8P05470_001	Banana	plastid	41.73	47.49
Bra001512.1-P	Field mustard	cytosol	44.19	47.45
KRG97321	Soybean	nucleus	46.3	47.05
KRH58931	Soybean	nucleus	54.05	46.8
KRH38004	Soybean	cytosol	48.77	46.55
GSMUA_Achr7P09200_001	Banana	cytosol, extracellular, nucleus, plastid	41.55	46.27
KRH42833	Soybean	cytosol	53.7	46.14
GSMUA_Achr3P25890_001	Banana	mitochondrion	42.08	46.14
VIT_06s0004g00690.t01	Wine grape	nucleus	53.7	45.52
GSMUA_Achr4P08700_001	Banana	extracellular, nucleus, plastid, vacuole	42.43	44.96
Solyc10g078650.1.1	Tomato	nucleus	47.18	44.15
GSMUA_Achr6P04920_001	Banana	endoplasmic reticulum, vacuole	39.79	43.71
Solyc10g080640.1.1	Tomato	nucleus	48.59	43.6
GSMUA_Achr6P01510_001	Banana	nucleus	15.85	43.48
GSMUA_Achr10P...	Banana	endoplasmic reticulum	39.26	43.13
GSMUA_Achr6P05460_001	Banana	cytosol	41.02	42.83
GSMUA_Achr6P13300_001	Banana	cytosol	37.32	42.83
PGSC0003DMT400021529	Potato	cytosol	47.54	42.19
Solyc01g005800.2.1	Tomato	nucleus	47.89	41.15
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plastid	37.5	38.04
Zm00001d024699_P001	Maize	nucleus	20.6	37.03
PGSC0003DMT400060938	Potato	nucleus, plastid	45.25	36.66
GSMUA_Achr3P32310_001	Banana	endoplasmic reticulum	41.2	25.97

Protein Annotations

EnsemblPlants:GSMUA_Achr9P21650_001	EnsemblPlants:GSMUA_Achr9T21650_001	EnsemblPlantsGene:GSMUA_Achr9G21650_001	PANTHER:PTHR31250	PANTHER:PTHR31250:SF4	SEG:seg
SignalP:SignalP-noTM	UniParc:UPI00029685BE	UniProt:M0U2C4	MapMan:35.1	:	:

Description

calmodulin-binding protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr9G21650_001]

Coordinates

chr9:-:26802462..26804967

Molecular Weight (calculated)

63683.7 Da

IEP (calculated)

8.951

GRAVY (calculated)

-0.518

Length

568 amino acids

Sequence
(BLAST)

001: MSQHVFALGF VFLGIKMKPA VSTPCLQAGI RSSPRNMRYL KSRTLPPHIN IGITFPRSGS SYNSMNDTLE TLIMGIIRFG DELRLNPRFI SFNGADSEPA
101: ILKAFGPRKL LIEGSVSSSR RGMDPFHLET KISVKSPRLE PDASAMSDDP KSPKHGAAVK LQKVYKSFRT RRQLADCAVL VEQRWWKLLD FVLLKLSSVS
201: FFVIEKPESA VSRWSRARTR AAKVGKGLSK DEKAQKLALQ HWLEAIDPRH RYGHNLQFYY DCWLQCESTE PFFYWLDVGE GKEVDLEDQC TRSKLQQQCI
301: KYLGPKEREA YEVVIEDGKF MYRQSRQLLN TSGGPKDAKW IFVLSTSKNL YVGQKKKGTF QHSSFLAGGA ISAAGQLVVE DGALEAVWPH SGHYRPTEEN
401: FKEFMSFLDE NNVDLSDVKK SPTGEDDERD GGLKKSHSER NLAEKDITPA EPETTEDASS SVAFEVANKN LFLEEGEEDD EGFVPSELIL RRINSKKGIG
501: SGQLGKQLSF RWTTGAGPRI GCVRDYPSEL QFRALEQVNL SPRSAGASRF ALPRTAACGT PTAQQQPH

Best Arabidopsis Sequence Match ( AT3G58480.1 )
(BLAST)

001: METKTILRSI SFNDIDSDST ITESPEARKT LYNRSLSGKG TQRSRISPGD VENNFSIKPL TFMKEDDRYK MRIWKPVCEN EHAKEFLALL LGDGTYQAAL
101: KLQKVYRSFR TRRRLADCAV VVEQRWWKVL DFAELKRSSI SFFEIEKQET AVSRWSRART RAAKVGKGLS KDEKARKLAL QHWLEAIDPR HRYGHNLQFY
201: YHAWLHCDSK QPFFYWLDIG QGKELNHERC PRSKLYQQSI KYLGPTEREA YEVIIEDGKL MYKQSGIVLD TKEGPPDAKW IFVLSVSKIL YVGMKKKGNF
301: QHSSFLAGGA TLSAGRIVVD DGVLKAVWPH SGHYLPTEEN FQAFMSFLRE NNVDLANVKK NPDEEDGEAP AKVKRMPSRI KETEEEHCDF VDAETGFSPN
401: TKPNNHAELQ TLSRFHSKLS RLDEIPDEDD NMIEEEQDDE EEPETPSEQG YETAEETFIA EEEFTYPKSN LFDEDIEDYE KPVLKEKIMR RIDSHKGIKS
501: YQLAERLHSR WSTGAGPRIS CMRDYPSELQ FRVLEQAHLS PRASSNSSKI SPFAPVRTRG TSLGRSPLAE ELENL

Arabidopsis Description

IQM6IQ domain-containing protein IQM6 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2G8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.