Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P01560_001 | Banana | mitochondrion | 62.45 | 55.43 |
| Zm00001d024699_P001 | Maize | nucleus | 48.95 | 36.71 |
| GSMUA_Achr4P13570_001 | Banana | cytosol | 62.03 | 27.02 |
| GSMUA_Achr4P06580_001 | Banana | cytosol | 59.07 | 25.88 |
| GSMUA_Achr9P21650_001 | Banana | plastid, vacuole | 60.34 | 25.18 |
| GSMUA_Achr4P11190_001 | Banana | cytosol | 61.6 | 24.91 |
| VIT_08s0007g07190.t01 | Wine grape | cytosol | 55.27 | 24.58 |
| GSMUA_Achr8P24930_001 | Banana | cytosol | 39.66 | 24.42 |
| Bra027414.1-P | Field mustard | nucleus | 56.96 | 23.44 |
| GSMUA_Achr8P05470_001 | Banana | plastid | 48.1 | 22.85 |
| GSMUA_Achr7P09200_001 | Banana | cytosol, extracellular, nucleus, plastid | 48.95 | 22.75 |
| GSMUA_Achr8P26270_001 | Banana | plastid | 45.99 | 22.71 |
| AT3G13600.1 | Thale cress | nucleus | 57.81 | 22.64 |
| GSMUA_Achr4P09170_001 | Banana | cytosol | 46.41 | 22.63 |
| Bra021491.1-P | Field mustard | nucleus | 46.84 | 22.52 |
| GSMUA_Achr6P04920_001 | Banana | endoplasmic reticulum, vacuole | 48.52 | 22.24 |
| GSMUA_Achr3P25890_001 | Banana | mitochondrion | 48.1 | 22.01 |
| GSMUA_Achr3P29200_001 | Banana | cytosol | 58.65 | 21.72 |
| Solyc01g044420.2.1 | Tomato | nucleus | 51.9 | 21.35 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum | 46.41 | 21.28 |
| GSMUA_Achr4P08700_001 | Banana | extracellular, nucleus, plastid, vacuole | 48.1 | 21.27 |
| KRH58931 | Soybean | nucleus | 58.65 | 21.19 |
| GSMUA_Achr3P03060_001 | Banana | cytosol | 33.76 | 20.94 |
| KRH42833 | Soybean | cytosol | 58.23 | 20.88 |
| GSMUA_Achr6P05460_001 | Banana | cytosol | 46.84 | 20.4 |
| KRG97321 | Soybean | nucleus | 48.1 | 20.39 |
| VIT_06s0004g00690.t01 | Wine grape | nucleus | 56.96 | 20.15 |
| Bra014570.1-P | Field mustard | nucleus | 46.84 | 19.72 |
| Solyc10g080640.1.1 | Tomato | nucleus | 52.32 | 19.59 |
| AT3G58480.1 | Thale cress | nucleus | 47.26 | 19.48 |
| KRH71773 | Soybean | nucleus | 45.99 | 19.46 |
| KRH38004 | Soybean | cytosol | 48.52 | 19.33 |
| PGSC0003DMT400080788 | Potato | nucleus | 44.3 | 19.27 |
| Solyc01g005800.2.1 | Tomato | nucleus | 53.59 | 19.21 |
| Bra001512.1-P | Field mustard | cytosol | 42.62 | 19.09 |
| GSMUA_Achr6P13300_001 | Banana | cytosol | 38.82 | 18.59 |
| Solyc10g078650.1.1 | Tomato | nucleus | 46.84 | 18.29 |
| PGSC0003DMT400021529 | Potato | cytosol | 49.37 | 18.28 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, plastid | 36.29 | 15.36 |
| PGSC0003DMT400060938 | Potato | nucleus, plastid | 43.04 | 14.55 |
| GSMUA_Achr3P32310_001 | Banana | endoplasmic reticulum | 47.26 | 12.43 |
| GSMUA_Achr6P01510_001 | Banana | nucleus | 10.55 | 12.08 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr6P01520_001 | EnsemblPlants:GSMUA_Achr6T01520_001 | EnsemblPlantsGene:GSMUA_Achr6G01520_001 | PANTHER:PTHR31250 | PANTHER:PTHR31250:SF4 | UniParc:UPI0002952AEC |
| UniProt:M0T3A0 | MapMan:35.1 | : | : | : | : |
Description
calmodulin-binding protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr6G01520_001]
Coordinates
chr6:-:992395..993361
Molecular Weight (calculated)
27575.7 Da
IEP (calculated)
10.144
GRAVY (calculated)
-0.652
Length
237 amino acids
Sequence
(BLAST)
(BLAST)
001: MPISFSFPEV DDDAKDESSK AILNDNVRPA QRSLSFKGRD ANPSTVKTLQ PGKLVVKGSL SFNNTRQMRP YHFETMISLV NPTTEDDNSK SSNEPALSRF
101: TVLKDKPKHE AAVKLQKVYK SFRTRRQLAD CAVIVEQQWW KLIDFALLKL SSVSFFDIEK EESAVSRWSR ARTRAAKVGK GLSKDQKAQK LALQHWLEAI
201: DPRHRYGHNL HFYYDYWLHS ESRQPFFYWY VCRVPFP
101: TVLKDKPKHE AAVKLQKVYK SFRTRRQLAD CAVIVEQQWW KLIDFALLKL SSVSFFDIEK EESAVSRWSR ARTRAAKVGK GLSKDQKAQK LALQHWLEAI
201: DPRHRYGHNL HFYYDYWLHS ESRQPFFYWY VCRVPFP
001: MGLSLSLLLS AWKEVVTTQF FSFKNPVESF LETRSFSLKL KEGGLTSRTN SFKSENPQEK SPKTGMERSL SFNSWEIVTE VETEPMNKED EEIVEPTKPA
101: RNSLNGRNCE RIQITKPTIT PPTPFVFFSP RPVTELDAAA TTLQKVYKSY RTRRNLADCA VVVEELWWKT LDAAALNLSS VAFFEEEKHE TAVSKWARAR
201: TRAAKVGKGL SKDEKAQKLA LQHWLEAIDP RHRYGHNLHF YYDVWSASMS AQPFFYWLDI GDGKDVNLEH HPRSVLQKQC IKYLGPLERE AYEVIVEDGK
301: LMNKQSMTLI NSTEDSKSIF VLSTTRTLYV GQKKKGRFQH SSFLSGGATT AAGRLVAREG ILEAIWPYSG HYLPTEDNFN EFISFLEENN VDMTNVKVRN
401: IIFGCIHAKY EKWYVLTYLI
101: RNSLNGRNCE RIQITKPTIT PPTPFVFFSP RPVTELDAAA TTLQKVYKSY RTRRNLADCA VVVEELWWKT LDAAALNLSS VAFFEEEKHE TAVSKWARAR
201: TRAAKVGKGL SKDEKAQKLA LQHWLEAIDP RHRYGHNLHF YYDVWSASMS AQPFFYWLDI GDGKDVNLEH HPRSVLQKQC IKYLGPLERE AYEVIVEDGK
301: LMNKQSMTLI NSTEDSKSIF VLSTTRTLYV GQKKKGRFQH SSFLSGGATT AAGRLVAREG ILEAIWPYSG HYLPTEDNFN EFISFLEENN VDMTNVKVRN
401: IIFGCIHAKY EKWYVLTYLI
Arabidopsis Description
IQM4IQ domain-containing protein IQM4 [Source:UniProtKB/Swiss-Prot;Acc:O64851]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.