Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY37478 | Canola | nucleus | 82.81 | 90.27 |
| CDY60813 | Canola | cytosol | 68.59 | 89.83 |
| Bra027414.1-P | Field mustard | nucleus | 84.79 | 89.06 |
| Bra021491.1-P | Field mustard | nucleus | 72.4 | 88.84 |
| CDX97500 | Canola | nucleus | 84.46 | 88.72 |
| CDY23623 | Canola | nucleus | 83.64 | 88.15 |
| Bra001512.1-P | Field mustard | cytosol | 74.71 | 85.44 |
| CDX75719 | Canola | cytosol | 65.95 | 76.44 |
| Solyc01g044420.2.1 | Tomato | nucleus | 56.53 | 59.38 |
| PGSC0003DMT400080788 | Potato | nucleus | 53.06 | 58.9 |
| KRH58931 | Soybean | nucleus | 63.14 | 58.23 |
| GSMUA_Achr6P01520_001 | Banana | cytosol | 22.64 | 57.81 |
| KRH42833 | Soybean | cytosol | 62.98 | 57.64 |
| HORVU2Hr1G015200.2 | Barley | cytosol | 37.85 | 57.25 |
| KRG97321 | Soybean | nucleus | 52.07 | 56.35 |
| GSMUA_Achr4P06580_001 | Banana | cytosol | 49.75 | 55.64 |
| HORVU1Hr1G045060.3 | Barley | nucleus | 33.88 | 55.56 |
| GSMUA_Achr4P13570_001 | Banana | cytosol | 49.92 | 55.51 |
| TraesCS5A01G375700.1 | Wheat | cytosol | 48.76 | 55.24 |
| CDX82532 | Canola | cytosol | 45.45 | 54.78 |
| TraesCS5B01G377900.1 | Wheat | cytosol | 48.59 | 54.65 |
| Zm00001d047402_P001 | Maize | cytosol | 48.26 | 54.28 |
| VIT_06s0004g00690.t01 | Wine grape | nucleus | 59.67 | 53.88 |
| HORVU4Hr1G074540.1 | Barley | cytosol | 22.31 | 53.78 |
| HORVU2Hr1G074420.1 | Barley | cytosol | 13.06 | 53.38 |
| Os03t0374500-00 | Rice | nucleus | 50.58 | 53.03 |
| Solyc01g005800.2.1 | Tomato | nucleus | 57.85 | 52.95 |
| EER92212 | Sorghum | cytosol | 49.59 | 52.26 |
| Os07t0633400-01 | Rice | cytosol | 50.41 | 52.14 |
| TraesCS2A01G154900.1 | Wheat | cytosol | 48.59 | 52.13 |
| TraesCS2D01G160200.1 | Wheat | cytosol | 48.93 | 51.84 |
| TraesCS2B01G180000.1 | Wheat | cytosol | 48.76 | 51.57 |
| HORVU2Hr1G028140.2 | Barley | cytosol | 48.26 | 51.5 |
| HORVU5Hr1G093140.18 | Barley | cytosol, nucleus | 48.59 | 51.49 |
| GSMUA_Achr9P21650_001 | Banana | plastid, vacuole | 47.77 | 50.88 |
| GSMUA_Achr4P11190_001 | Banana | cytosol | 48.76 | 50.34 |
| AT3G58480.1 | Thale cress | nucleus | 47.11 | 49.57 |
| HORVU2Hr1G028150.1 | Barley | cytosol | 48.26 | 49.41 |
| HORVU7Hr1G052820.45 | Barley | cytosol | 19.67 | 48.18 |
| TraesCS5D01G385200.2 | Wheat | cytosol | 44.3 | 48.11 |
| EER97603 | Sorghum | nucleus | 49.42 | 47.24 |
| HORVU4Hr1G052500.37 | Barley | cytosol, nucleus | 19.17 | 46.96 |
| HORVU5Hr1G023670.50 | Barley | cytosol | 19.17 | 46.96 |
| GSMUA_Achr6P01560_001 | Banana | mitochondrion | 20.17 | 45.69 |
| AT2G26190.1 | Thale cress | plastid | 40.0 | 45.49 |
| Os10t0411500-01 | Rice | plasma membrane | 48.76 | 45.45 |
| Zm00001d022245_P001 | Maize | cytosol | 49.59 | 45.39 |
| AT5G57010.1 | Thale cress | cytosol | 37.02 | 45.25 |
| AT3G52870.1 | Thale cress | cytosol | 34.05 | 45.18 |
| GSMUA_Achr3P29200_001 | Banana | cytosol | 47.11 | 44.53 |
| HORVU3Hr1G010590.3 | Barley | nucleus | 21.82 | 44.15 |
| TraesCS4A01G021000.1 | Wheat | nucleus | 44.3 | 43.93 |
| Os03t0167200-01 | Rice | plasma membrane | 43.97 | 43.61 |
| HORVU5Hr1G120690.3 | Barley | nucleus | 21.82 | 43.56 |
| TraesCS4D01G281600.1 | Wheat | nucleus | 43.97 | 43.39 |
| KXG40105 | Sorghum | cytosol | 45.62 | 43.33 |
| HORVU4Hr1G074550.4 | Barley | cytosol | 43.14 | 42.65 |
| Zm00001d032981_P001 | Maize | cytosol | 45.79 | 42.23 |
| Zm00001d027815_P002 | Maize | nucleus | 44.79 | 42.21 |
| AT4G33050.5 | Thale cress | plastid | 39.01 | 42.14 |
| EER94258 | Sorghum | cytosol | 46.28 | 41.67 |
| GSMUA_Achr6P01510_001 | Banana | nucleus | 14.05 | 41.06 |
| TraesCS4B01G282600.2 | Wheat | nucleus | 43.97 | 39.76 |
| HORVU2Hr1G074410.1 | Barley | cytosol, nucleus | 9.26 | 38.36 |
| Zm00001d024699_P001 | Maize | nucleus | 20.0 | 38.29 |
| HORVU5Hr1G110660.2 | Barley | mitochondrion | 6.78 | 33.06 |
| TraesCS2B01G401000.1 | Wheat | plastid | 18.35 | 31.99 |
Protein Annotations
| MapMan:35.1 | EntrezGene:820562 | UniProt:A0A178VF87 | ProteinID:AEE75381.1 | ProteinID:ANM64201.1 | ArrayExpress:AT3G13600 |
| EnsemblPlantsGene:AT3G13600 | RefSeq:AT3G13600 | TAIR:AT3G13600 | RefSeq:AT3G13600-TAIR-G | EnsemblPlants:AT3G13600.1 | TAIR:AT3G13600.1 |
| Unigene:At.53294 | ProteinID:BAB02602.1 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005737 | GO:GO:0008150 | RefSeq:NP_001319541.1 | RefSeq:NP_187969.1 | ProteinID:OAP04444.1 | PANTHER:PTHR31250 |
| PANTHER:PTHR31250:SF4 | UniProt:Q9LHN9 | UniParc:UPI00000A50D5 | SEG:seg | : | : |
Description
IQM2Calmodulin-binding family protein [Source:UniProtKB/TrEMBL;Acc:A0A178VF87]
Coordinates
chr3:+:4444554..4447660
Molecular Weight (calculated)
68949.2 Da
IEP (calculated)
5.619
GRAVY (calculated)
-0.695
Length
605 amino acids
Sequence
(BLAST)
(BLAST)
001: MGVSFSCPFA EQDDVEAALD SVTVKSISFG DDDECKTPKR SVNFNDGTLE PTILKSMGSG KMVVEKSVSL KGMQLERMIS LNRSVKDNGF EIAKEFSVLD
101: PRNPKHEAAI KLQKVYKSFR TRRKLADCAV LVEQSWWKLL DFAELKRSSI SFFDIEKHET AISRWSRART RAAKVGKGLS KNGKAQKLAL QHWLEAIDPR
201: HRYGHNLHFY YNKWLHCQSR EPFFYWLDIG EGKEVNLVEK CPRLKLQQQC IKYLGPMERK AYEVVVEDGK FFYKHSGEIL QTSDMEDSES KWIFVLSTSK
301: VLYVGKKKKG TFQHSSFLAG GATVAAGRLV VENGVLKAVW PHSGHYQPTE ENFMDFLSFL RENDVDITDV KMSPTDEDEF SIYKQRSTHM RNHSLEEDLE
401: AEKTISFQDK VDPSGEEQTL MRNESISRKQ SDLETPEKME SFSTFGDEIQ SVGSKSTKVS EDYDSGDDEE EEEEMFELEQ ESMPSEQSSP RGEEKEEGET
501: KESEVVKITE ESILKRINSK KETKSFQLGK QLSCKWTTGA GPRIGCVRDY PSELQFQALE QVNLSPRSAS VSRLCFSSSS QTQTPQMSPL WRGMSLPTDI
601: TLTNS
101: PRNPKHEAAI KLQKVYKSFR TRRKLADCAV LVEQSWWKLL DFAELKRSSI SFFDIEKHET AISRWSRART RAAKVGKGLS KNGKAQKLAL QHWLEAIDPR
201: HRYGHNLHFY YNKWLHCQSR EPFFYWLDIG EGKEVNLVEK CPRLKLQQQC IKYLGPMERK AYEVVVEDGK FFYKHSGEIL QTSDMEDSES KWIFVLSTSK
301: VLYVGKKKKG TFQHSSFLAG GATVAAGRLV VENGVLKAVW PHSGHYQPTE ENFMDFLSFL RENDVDITDV KMSPTDEDEF SIYKQRSTHM RNHSLEEDLE
401: AEKTISFQDK VDPSGEEQTL MRNESISRKQ SDLETPEKME SFSTFGDEIQ SVGSKSTKVS EDYDSGDDEE EEEEMFELEQ ESMPSEQSSP RGEEKEEGET
501: KESEVVKITE ESILKRINSK KETKSFQLGK QLSCKWTTGA GPRIGCVRDY PSELQFQALE QVNLSPRSAS VSRLCFSSSS QTQTPQMSPL WRGMSLPTDI
601: TLTNS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.