Factsheet for GSMUA_Achr4P06580_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P13570_001	Banana	cytosol	71.9	71.51
GSMUA_Achr9P21650_001	Banana	plastid, vacuole	66.91	63.73
GSMUA_Achr4P11190_001	Banana	cytosol	68.02	62.8
GSMUA_Achr6P01520_001	Banana	cytosol	25.88	59.07
Bra021491.1-P	Field mustard	nucleus	51.76	56.8
VIT_08s0007g07190.t01	Wine grape	cytosol	54.34	55.16
Bra027414.1-P	Field mustard	nucleus	55.82	52.43
GSMUA_Achr3P29200_001	Banana	cytosol	61.92	52.34
GSMUA_Achr8P24930_001	Banana	cytosol	36.97	51.95
AT3G13600.1	Thale cress	nucleus	55.64	49.75
GSMUA_Achr4P09170_001	Banana	cytosol	44.55	49.59
GSMUA_Achr8P26270_001	Banana	plastid	43.99	49.58
Bra001512.1-P	Field mustard	cytosol	48.43	49.53
GSMUA_Achr3P03060_001	Banana	cytosol	34.75	49.21
GSMUA_Achr7P09200_001	Banana	cytosol, extracellular, nucleus, plastid	46.03	48.82
PGSC0003DMT400080788	Potato	nucleus	48.98	48.62
Solyc01g044420.2.1	Tomato	nucleus	51.76	48.61
KRH71773	Soybean	nucleus	49.91	48.21
GSMUA_Achr8P05470_001	Banana	plastid	44.36	48.1
KRG97321	Soybean	nucleus	48.61	47.05
GSMUA_Achr3P25890_001	Banana	mitochondrion	44.92	46.91
AT3G58480.1	Thale cress	nucleus	49.72	46.78
KRH38004	Soybean	cytosol	51.39	46.72
Bra014570.1-P	Field mustard	nucleus	48.24	46.36
KRH58931	Soybean	nucleus	56.19	46.34
GSMUA_Achr6P04920_001	Banana	endoplasmic reticulum, vacuole	43.81	45.84
KRH42833	Soybean	cytosol	55.82	45.69
VIT_06s0004g00690.t01	Wine grape	nucleus	56.56	45.67
GSMUA_Achr4P08700_001	Banana	extracellular, nucleus, plastid, vacuole	44.92	45.34
GSMUA_Achr6P01560_001	Banana	mitochondrion	22.18	44.94
GSMUA_Achr10P...	Banana	endoplasmic reticulum	42.88	44.87
GSMUA_Achr6P13300_001	Banana	cytosol	40.11	43.84
GSMUA_Achr6P05460_001	Banana	cytosol	43.25	43.01
Solyc10g080640.1.1	Tomato	nucleus	50.28	42.97
Solyc10g078650.1.1	Tomato	nucleus	47.13	42.01
GSMUA_Achr6P01510_001	Banana	nucleus	15.9	41.55
PGSC0003DMT400021529	Potato	cytosol	48.8	41.25
Solyc01g005800.2.1	Tomato	nucleus	50.28	41.15
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plastid	38.45	37.14
Zm00001d024699_P001	Maize	nucleus	21.63	37.03
PGSC0003DMT400060938	Potato	nucleus, plastid	46.21	35.66
GSMUA_Achr3P32310_001	Banana	endoplasmic reticulum	43.99	26.42

Protein Annotations

EnsemblPlants:GSMUA_Achr4P06580_001	EnsemblPlants:GSMUA_Achr4T06580_001	EnsemblPlantsGene:GSMUA_Achr4G06580_001	PANTHER:PTHR31250	PANTHER:PTHR31250:SF4	SEG:seg
UniParc:UPI000296CCE9	UniProt:M0SLM5	MapMan:35.1	:	:	:

Description

calmodulin-binding protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr4G06580_001]

Coordinates

chr4:+:4958230..4960904

Molecular Weight (calculated)

61550.0 Da

IEP (calculated)

8.847

GRAVY (calculated)

-0.609

Length

541 amino acids

Sequence
(BLAST)

001: MGIAISCPGA AYDSINDSLE AVLNRSIGLG DNVRSTLQSI GFNGRDYCLP AILEAFGLAK SLIKGSFHLE PKISTKSPAL EPDNSTKSDD LEGLKFTSLV
101: KRSRESTSIR PDNPKHEAAV KLQKVYKSFR TRRQLADCAV LVEQHWWKLL DFALLKQSSV SFFDIEKPES AMSRWSRATI RAAKVGKGLS KDENAQKLAL
201: QHWLEAIDPR HRYGHNLQFY YDRWLQCDSM QPFFYWLDVG EGKEVNLEER CTRSKLQQQC IKYLGPKERE AYEVIVEDGK FMYRQSRQLL DTSNGQKDAK
301: WIFVLSTSKK LYVGQKRKGK FQHSSFLAGG ATSAAGRLVV EDGVLKAVWP HSGHYRPTEE NFQELMSFLE ENSVDLTDVK RSPTEEDDEP CSNLSRLSRG
401: TTTDMASGTS SFEAFKELHH KFRKQIIAED NEESEDEVHE NTFVPSESIL RRMNTKKAIR SYQLGKQLSF KWTTGAGPRI GCVRDYPSEL QFRALEQVNL
501: SPRIPEMFRF ASPWILKCPT TQEASVLKVL QQQPHKPGNG R

Best Arabidopsis Sequence Match ( AT3G58480.1 )
(BLAST)

001: METKTILRSI SFNDIDSDST ITESPEARKT LYNRSLSGKG TQRSRISPGD VENNFSIKPL TFMKEDDRYK MRIWKPVCEN EHAKEFLALL LGDGTYQAAL
101: KLQKVYRSFR TRRRLADCAV VVEQRWWKVL DFAELKRSSI SFFEIEKQET AVSRWSRART RAAKVGKGLS KDEKARKLAL QHWLEAIDPR HRYGHNLQFY
201: YHAWLHCDSK QPFFYWLDIG QGKELNHERC PRSKLYQQSI KYLGPTEREA YEVIIEDGKL MYKQSGIVLD TKEGPPDAKW IFVLSVSKIL YVGMKKKGNF
301: QHSSFLAGGA TLSAGRIVVD DGVLKAVWPH SGHYLPTEEN FQAFMSFLRE NNVDLANVKK NPDEEDGEAP AKVKRMPSRI KETEEEHCDF VDAETGFSPN
401: TKPNNHAELQ TLSRFHSKLS RLDEIPDEDD NMIEEEQDDE EEPETPSEQG YETAEETFIA EEEFTYPKSN LFDEDIEDYE KPVLKEKIMR RIDSHKGIKS
501: YQLAERLHSR WSTGAGPRIS CMRDYPSELQ FRVLEQAHLS PRASSNSSKI SPFAPVRTRG TSLGRSPLAE ELENL

Arabidopsis Description

IQM6IQ domain-containing protein IQM6 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2G8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.