Factsheet for Solyc01g005800.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g044420.2.1	Tomato	nucleus	64.9	74.48
CDY60813	Canola	cytosol	44.48	63.64
Bra021491.1-P	Field mustard	nucleus	45.39	60.85
CDY37478	Canola	nucleus	50.83	60.54
CDY23623	Canola	nucleus	51.89	59.76
Bra027414.1-P	Field mustard	nucleus	52.04	59.72
CDX97500	Canola	nucleus	52.04	59.72
Solyc03g121770.1.1	Tomato	cytosol	23.45	58.05
AT3G13600.1	Thale cress	nucleus	52.95	57.85
KRH58931	Soybean	nucleus	56.58	57.01
Bra001512.1-P	Field mustard	cytosol	44.93	56.14
KRH42833	Soybean	cytosol	56.13	56.13
KRG97321	Soybean	nucleus	47.35	55.99
VIT_06s0004g00690.t01	Wine grape	nucleus	56.43	55.67
HORVU1Hr1G045060.3	Barley	nucleus	30.41	54.47
GSMUA_Achr6P01520_001	Banana	cytosol	19.21	53.59
HORVU2Hr1G015200.2	Barley	cytosol	32.38	53.5
TraesCS5A01G375700.1	Wheat	cytosol	43.12	53.37
TraesCS5B01G377900.1	Wheat	cytosol	42.81	52.6
GSMUA_Achr4P13570_001	Banana	cytosol	42.97	52.21
HORVU4Hr1G074540.1	Barley	cytosol	19.82	52.19
HORVU2Hr1G074420.1	Barley	cytosol	11.5	51.35
HORVU5Hr1G093140.18	Barley	cytosol, nucleus	43.57	50.44
Zm00001d047402_P001	Maize	cytosol	41.0	50.37
GSMUA_Achr4P06580_001	Banana	cytosol	41.15	50.28
Os03t0374500-00	Rice	nucleus	43.12	49.39
Solyc12g008960.1.1	Tomato	nucleus	36.76	49.29
Solyc07g040710.2.1	Tomato	cytosol	34.64	49.14
EER92212	Sorghum	cytosol	42.51	48.95
Os07t0633400-01	Rice	cytosol	43.12	48.72
CDX75719	Canola	cytosol	38.43	48.66
GSMUA_Achr9P21650_001	Banana	plastid, vacuole	41.15	47.89
GSMUA_Achr4P11190_001	Banana	cytosol	42.36	47.78
HORVU5Hr1G023670.50	Barley	cytosol	17.85	47.77
HORVU7Hr1G052820.45	Barley	cytosol	17.85	47.77
TraesCS2A01G154900.1	Wheat	cytosol	40.7	47.7
TraesCS2D01G160200.1	Wheat	cytosol	40.7	47.11
TraesCS2B01G180000.1	Wheat	cytosol	40.7	47.03
HORVU4Hr1G052500.37	Barley	cytosol, nucleus	17.55	46.96
HORVU2Hr1G028140.2	Barley	cytosol	40.24	46.91
TraesCS5D01G385200.2	Wheat	cytosol	39.49	46.86
Solyc10g085610.1.1	Tomato	cytosol	30.56	46.44
HORVU5Hr1G120690.3	Barley	nucleus	20.88	45.54
Solyc10g080640.1.1	Tomato	nucleus	43.57	45.5
Solyc10g083360.1.1	Tomato	cytosol	31.92	45.28
HORVU3Hr1G010590.3	Barley	nucleus	20.42	45.15
Solyc10g078650.1.1	Tomato	nucleus	41.45	45.14
HORVU2Hr1G028150.1	Barley	cytosol	40.24	45.01
GSMUA_Achr6P01560_001	Banana	mitochondrion	17.85	44.19
CDX82532	Canola	cytosol	33.28	43.82
Os10t0411500-01	Rice	plasma membrane	42.36	43.14
TraesCS4A01G021000.1	Wheat	nucleus	39.79	43.11
EER97603	Sorghum	nucleus	41.15	42.97
Os03t0167200-01	Rice	plasma membrane	39.64	42.95
TraesCS4D01G281600.1	Wheat	nucleus	39.79	42.9
Zm00001d032981_P001	Maize	cytosol	42.51	42.84
KXG40105	Sorghum	cytosol	41.15	42.7
HORVU4Hr1G074550.4	Barley	cytosol	39.49	42.65
HORVU2Hr1G074410.1	Barley	cytosol, nucleus	9.38	42.47
Zm00001d022245_P001	Maize	cytosol	42.06	42.06
Zm00001d027815_P002	Maize	nucleus	40.7	41.9
EER94258	Sorghum	cytosol	42.21	41.52
GSMUA_Achr3P29200_001	Banana	cytosol	40.09	41.41
TraesCS4B01G282600.2	Wheat	nucleus	40.85	40.36
GSMUA_Achr6P01510_001	Banana	nucleus	12.56	40.1
Solyc08g062930.1.1	Tomato	cytosol	23.0	38.97
Solyc09g009770.2.1	Tomato	nucleus	30.71	38.67
Zm00001d024699_P001	Maize	nucleus	18.0	37.66
HORVU5Hr1G110660.2	Barley	mitochondrion	6.96	37.1
TraesCS2B01G401000.1	Wheat	plastid	15.28	29.11

Protein Annotations

EnsemblPlants:Solyc01g005800.2.1	EnsemblPlantsGene:Solyc01g005800.2	ncoils:Coil	PANTHER:PTHR31250	PANTHER:PTHR31250:SF4	SEG:seg
UniParc:UPI0002761CE2	UniProt:K4ASE6	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr1:-:512638..515352

Molecular Weight (calculated)

74892.3 Da

IEP (calculated)

7.652

GRAVY (calculated)

-0.670

Length

661 amino acids

Sequence
(BLAST)

001: MGLSFSSPLA SQSDSGTGLD SVVVKSIDFG HDEQKTPLRS VSFKSHEKEP TILQSEGSGR MSIEKTISFR TMGSAMELKR TSSEEKPEFS EFHRLGSMNK
101: ESQKSPLAYT SSPKHEAALK LQKVYKSFRT RRKLADCAVL IEQSWYVFYA EKNILSINSI DLNVPDMYFL ENFRWKLLDF AELKHSSISF FDLDKHETAV
201: SRWSRARTRA AKVGKGLSKN GKAQKLALQH WLEAIDPRHR YGHNLHFYYV QWLHSQSKEP FFYWLDIGEG KEVNIVDKCP RWKLQQQCIK YLGPMERKAY
301: EVEVEGGKLF YKETGKLLDT TDEPKGTKWI FVLSTSKTLY VGKKTKGTFQ HSSFLAGGAT LAAGRIVAER GVLKAVWPHS GHYRPTPENF QDFISFMTEN
401: NVDLNDVKLD SDEDEEESIG KKSAVFLRGD SSEDDLQKDG LETEENDLEE LNSEKRDLKV QEQAADIQLS NSKPSHNFSI KLPTLQIPRN DGFIEKLKNE
501: SEAAKSFSYL ESPTDGYRTA RELFAPEQDQ MDLERSSSVE ELDVSNEEII PDESIIQRIN SHKDLKSYQL GKQLSCKWST GAGPRIGCLR DYPSQLQSHA
601: LEQVSLSPRS ACRLKMNFPS RASTPTSLSR VMQVSCSLSP MGNKTLSCLN SKYSSPPHKG P

Best Arabidopsis Sequence Match ( AT3G13600.2 )
(BLAST)

001: MGVSFSCPFA EQDDVEAALD SVTVKSISFG DDDECKTPKR SVNFNDGTLE PTILKSMGSG KMVVEKSVSL KGMQLERMIS LNRSVKDNGF EIAKEFSVLD
101: PRNPKHEAAI KLQKVYKSFR TRRKLADCAV LVEQSWWKLL DFAELKRSSI SFFDIEKHET AISRWSRART RAAKVGKGLS KNGKAQKLAL QHWLEAIDPR
201: HRYGHNLHFY YNKWLHCQSR EPFFYWLDIG EGKEVNLVEK CPRLKLQQQC IKYLGPMERK AYEVVVEDGK FFYKHSGEIL QTSDMEDSES KWIFVLSTSK
301: VLYVGKKKKG TFQHSSFLAG GATVAAGRLV VENGVLKAVW PHSGHYQPTE ENFMDFLSFL RENDVDITDV KMSPTDEDEF SIYKQRSTHM RNHSLEEDLE
401: AEKTISFQDK VDPSGEEQTL MRNESISRKQ SDLETPEKME SFSTFGDEIQ SVGSKSTKVS EDYDSGDDEE EEEEMFELEQ ESMPSEQSSP RGEEKEEGET
501: KESEVVKITE ESILKRINSK KETKSFQLGK QLSCKWTTGA GPRIGCVRDY PSELQFQALE QVNLSPRSAS VSRLCFSSSS QTQTPQMSPL WRGMSLPTDI
601: TLTNS

Arabidopsis Description

IQM2Calmodulin-binding family protein [Source:UniProtKB/TrEMBL;Acc:A0A178VF87]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.