Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra021491.1-P | Field mustard | nucleus | 98.48 | 92.29 |
| CDY37478 | Canola | nucleus | 98.92 | 82.34 |
| CDX97500 | Canola | nucleus | 90.26 | 72.4 |
| CDY23623 | Canola | nucleus | 89.61 | 72.13 |
| AT3G13600.1 | Thale cress | nucleus | 89.83 | 68.59 |
| CDX75719 | Canola | cytosol | 70.13 | 62.07 |
| CDX75320 | Canola | endoplasmic reticulum, extracellular | 44.16 | 56.35 |
| KRG97321 | Soybean | nucleus | 65.37 | 54.02 |
| Solyc01g044420.2.1 | Tomato | nucleus | 63.85 | 51.22 |
| CDX82532 | Canola | cytosol | 55.19 | 50.8 |
| PGSC0003DMT400080788 | Potato | nucleus | 59.52 | 50.46 |
| KRH58931 | Soybean | nucleus | 69.7 | 49.09 |
| CDX68935 | Canola | plastid | 49.35 | 48.61 |
| KRH42833 | Soybean | cytosol | 69.48 | 48.56 |
| CDX77035 | Canola | plastid | 49.13 | 47.39 |
| CDY06038 | Canola | mitochondrion, nucleus | 7.36 | 47.22 |
| CDX88987 | Canola | nucleus | 55.84 | 46.74 |
| CDY00568 | Canola | nucleus | 55.84 | 46.07 |
| VIT_06s0004g00690.t01 | Wine grape | nucleus | 66.45 | 45.82 |
| CDX76252 | Canola | cytosol | 44.37 | 44.96 |
| CDY13342 | Canola | cytosol | 44.16 | 44.74 |
| CDX67541 | Canola | cytosol | 44.16 | 44.74 |
| CDX95381 | Canola | cytosol | 43.94 | 44.52 |
| Solyc01g005800.2.1 | Tomato | nucleus | 63.64 | 44.48 |
| CDY45026 | Canola | cytosol | 49.57 | 44.47 |
| CDY35312 | Canola | plastid | 49.13 | 43.4 |
| CDY13341 | Canola | cytosol | 16.45 | 41.99 |
| CDY28281 | Canola | cytosol, plastid | 49.35 | 40.93 |
| CDX80650 | Canola | extracellular | 5.63 | 29.89 |
| CDY45027 | Canola | extracellular | 0.65 | 25.0 |
Protein Annotations
| EnsemblPlants:CDY60813 | EnsemblPlantsGene:GSBRNA2T00030098001 | PANTHER:PTHR31250 | PANTHER:PTHR31250:SF4 | ProteinID:CDY60813 | ProteinID:CDY60813.1 |
| SEG:seg | UniParc:UPI0004EDF40C | UniProt:A0A078J777 | MapMan:35.1 | : | : |
Description
BnaA01g37320DBnaA01g37320D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J777]
Coordinates
chrLK033917:-:25605..27502
Molecular Weight (calculated)
53040.8 Da
IEP (calculated)
7.380
GRAVY (calculated)
-0.676
Length
462 amino acids
Sequence
(BLAST)
(BLAST)
001: MIARELSVLD PRNPKHEAAI KLQKVYKSFR TRRKLADCAV LVEQSWWKLL DFAELKRSSI SFFDIEKHET AISRWSRART RAAKVGKGLS KNGKAQKLAL
101: QHWLEAIDPR HRYGHNLHFY YNKWLHCQSR EPFFYWLDIG EGKEVNLVEK CPRSKLQQQC IKYLGPMERK AYEVVVEDGK FFYKNTGEML HTSSLEDSDS
201: KWIFVLSTSK VLYVGKKKKG TFQHSSFLAG GATVAAGRLV VEDGVLKAVW PHSGHYQPTE ENFLDFLSFL RENDVDITDV KMSPTDEDEF SMHKQRSTHM
301: RNHSLEEDLE AEKTVMADPR EEETTPVMDN IETPKKMESL SIFGDETQSK ATEDYDSEET KESEEVVNIP EESILKRINS KKESKSFQLG KQLSCKWTTG
401: AGPRIGCVRD YPSELQFQAL EQVNLSPRCG SVSRLCFSTS SQTQTPQMSP LWKSLPGDIT DS
101: QHWLEAIDPR HRYGHNLHFY YNKWLHCQSR EPFFYWLDIG EGKEVNLVEK CPRSKLQQQC IKYLGPMERK AYEVVVEDGK FFYKNTGEML HTSSLEDSDS
201: KWIFVLSTSK VLYVGKKKKG TFQHSSFLAG GATVAAGRLV VEDGVLKAVW PHSGHYQPTE ENFLDFLSFL RENDVDITDV KMSPTDEDEF SMHKQRSTHM
301: RNHSLEEDLE AEKTVMADPR EEETTPVMDN IETPKKMESL SIFGDETQSK ATEDYDSEET KESEEVVNIP EESILKRINS KKESKSFQLG KQLSCKWTTG
401: AGPRIGCVRD YPSELQFQAL EQVNLSPRCG SVSRLCFSTS SQTQTPQMSP LWKSLPGDIT DS
001: MGVSFSCPFA EQDDVEAALD SVTVKSISFG DDDECKTPKR SVNFNDGTLE PTILKSMGSG KMVVEKSVSL KGMQLERMIS LNRSVKDNGF EIAKEFSVLD
101: PRNPKHEAAI KLQKVYKSFR TRRKLADCAV LVEQSWWKLL DFAELKRSSI SFFDIEKHET AISRWSRART RAAKVGKGLS KNGKAQKLAL QHWLEAIDPR
201: HRYGHNLHFY YNKWLHCQSR EPFFYWLDIG EGKEVNLVEK CPRLKLQQQC IKYLGPMERK AYEVVVEDGK FFYKHSGEIL QTSDMEDSES KWIFVLSTSK
301: VLYVGKKKKG TFQHSSFLAG GATVAAGRLV VENGVLKAVW PHSGHYQPTE ENFMDFLSFL RENDVDITDV KMSPTDEDEF SIYKQRSTHM RNHSLEEDLE
401: AEKTISFQDK VDPSGEEQTL MRNESISRKQ SDLETPEKME SFSTFGDEIQ SVGSKSTKVS EDYDSGDDEE EEEEMFELEQ ESMPSEQSSP RGEEKEEGET
501: KESEVVKITE ESILKRINSK KETKSFQLGK QLSCKWTTGA GPRIGCVRDY PSELQFQALE QVNLSPRSAS VSRLCFSSSS QTQTPQMSPL WRGMSLPTDI
601: TLTNS
101: PRNPKHEAAI KLQKVYKSFR TRRKLADCAV LVEQSWWKLL DFAELKRSSI SFFDIEKHET AISRWSRART RAAKVGKGLS KNGKAQKLAL QHWLEAIDPR
201: HRYGHNLHFY YNKWLHCQSR EPFFYWLDIG EGKEVNLVEK CPRLKLQQQC IKYLGPMERK AYEVVVEDGK FFYKHSGEIL QTSDMEDSES KWIFVLSTSK
301: VLYVGKKKKG TFQHSSFLAG GATVAAGRLV VENGVLKAVW PHSGHYQPTE ENFMDFLSFL RENDVDITDV KMSPTDEDEF SIYKQRSTHM RNHSLEEDLE
401: AEKTISFQDK VDPSGEEQTL MRNESISRKQ SDLETPEKME SFSTFGDEIQ SVGSKSTKVS EDYDSGDDEE EEEEMFELEQ ESMPSEQSSP RGEEKEEGET
501: KESEVVKITE ESILKRINSK KETKSFQLGK QLSCKWTTGA GPRIGCVRDY PSELQFQALE QVNLSPRSAS VSRLCFSSSS QTQTPQMSPL WRGMSLPTDI
601: TLTNS
Arabidopsis Description
IQM2Calmodulin-binding family protein [Source:UniProtKB/TrEMBL;Acc:A0A178VF87]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.