CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 5
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra034295.1-P	Field mustard	plastid	99.04	98.86
CDX77035	Canola	plastid	89.48	97.7
AT2G26190.1	Thale cress	plastid	86.81	85.34
CDX75320	Canola	endoplasmic reticulum, extracellular	56.21	81.22
CDX68935	Canola	plastid	72.47	80.81
CDY45026	Canola	cytosol	71.51	72.62
CDY28281	Canola	cytosol, plastid	74.38	69.84
PGSC0003DMT400021177	Potato	cytosol, mitochondrion, nucleus, plastid	58.32	62.24
Zm00001d050807_P001	Maize	cytosol	16.63	60.84
VIT_04s0008g01070.t01	Wine grape	cytosol, extracellular, nucleus	61.95	60.0
GSMUA_Achr4P09170_001	Banana	cytosol	55.07	59.26
GSMUA_Achr8P26270_001	Banana	plastid	53.54	58.33
CDY45027	Canola	extracellular	1.34	58.33
KRH19209	Soybean	cytosol	30.02	57.93
GSMUA_Achr3P25890_001	Banana	mitochondrion	57.17	57.72
GSMUA_Achr8P05470_001	Banana	plastid	55.07	57.72
KRH02687	Soybean	plastid	57.55	56.79
KRH12419	Soybean	cytosol, plastid	57.17	56.74
GSMUA_Achr8P24930_001	Banana	cytosol	41.68	56.62
KRH37419	Soybean	cytosol, extracellular, nucleus, plastid	56.98	56.44
GSMUA_Achr4P08700_001	Banana	extracellular, nucleus, plastid, vacuole	56.6	55.22
Zm00001d036000_P001	Maize	cytosol	13.96	51.77
Zm00001d009755_P001	Maize	plastid	43.98	51.57
TraesCS3B01G238500.1	Wheat	cytosol, plastid	52.58	50.83
TraesCS3D01G209200.2	Wheat	plastid	52.39	49.64
Zm00001d042156_P001	Maize	mitochondrion	17.97	49.47
TraesCS3A01G206400.1	Wheat	plastid	52.39	49.28
HORVU3Hr1G049640.1	Barley	plastid	51.82	49.18
CDY60813	Canola	cytosol	43.4	49.13
Os01t0570800-01	Rice	plastid	53.15	48.86
Solyc08g062930.1.1	Tomato	cytosol	35.56	47.69
Zm00001d044253_P001	Maize	plastid	51.24	47.69
EES03151	Sorghum	mitochondrion, plastid	52.39	47.57
CDY13341	Canola	cytosol	15.3	44.2
EES18807	Sorghum	plastid	48.57	44.17
CDY37478	Canola	nucleus	46.08	43.42
Zm00001d011228_P001	Maize	plastid	44.93	42.73
CDY23623	Canola	nucleus	46.65	42.51
CDX97500	Canola	nucleus	46.27	42.01
CDX88987	Canola	nucleus	44.17	41.85
CDY00568	Canola	nucleus	44.55	41.61
CDX95381	Canola	cytosol	34.99	40.13
CDY13342	Canola	cytosol	34.8	39.91
CDX67541	Canola	cytosol	34.61	39.69
CDX76252	Canola	cytosol	34.42	39.47
CDX80650	Canola	extracellular	6.5	39.08
CDY06038	Canola	mitochondrion, nucleus	4.78	34.72
CDX75719	Canola	cytosol	34.61	34.67
CDX82532	Canola	cytosol	31.74	33.07
GSMUA_Achr3P32310_001	Banana	endoplasmic reticulum	55.45	32.19

Protein Annotations

EnsemblPlants:CDY35312	EnsemblPlantsGene:GSBRNA2T00058278001	PANTHER:PTHR31250	PANTHER:PTHR31250:SF1	ProteinID:CDY35312	ProteinID:CDY35312.1
SEG:seg	UniParc:UPI0004EE66F7	UniProt:A0A078HC08	MapMan:35.1	:	:

Description

BnaA04g15350DBnaA04g15350D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HC08]

Coordinates

chrLK032350:+:22725..25348

Molecular Weight (calculated)

59376.2 Da

IEP (calculated)

8.189

GRAVY (calculated)

-0.576

Length

523 amino acids

Sequence
(BLAST)

001: MGLSLSLLVS ACKEVLSNQF FSFKNPVESF LGVRSFGLTS RTNSFKSEAP ENSPKAAGME RSLSFNSWEI PTEAKTEPTT NQADDQVVDV KKPKRNSLNG
101: RTCERIQITK PTITPPEPFV FFSPRPLAEL GAAATTLQKV YKSYRTRRNL ADCAVVVEEL WWKTLDSAAL KLSSVSFFEE EKHETAVSKW ARARTRAAKV
201: GKGLSKDEKA QKLALQHWLE AIDPRHRYGH NLHFYYDVWS ASMSAQPFFY WLDVGDGKDV NLEHHPRNVL QKQCIKYLGP MEREAYEVIV EDGRLMYKQN
301: MTLISSTEES KTIFVLSTTR TLYVGQKKKG VFQHSSFLSG GATTAAGRLV ARDGVLEAIW PYSGHYLPTE DNFKEFISFL EENNVDLTNV KRCTVNEEYS
401: SFKYEEETKE DETENKHVET NITEDKEEEE KETQRPVFEL SKRLSCKWNS GVGPRIGCVR DYPMELQSQA FEQVSLSPRI SPASARFPSP YGPIPSPRPS
501: PRVRLSPRLA YMGIPSPRVQ VNC

Best Arabidopsis Sequence Match ( AT2G26190.3 )
(BLAST)

001: MGLSLSLLLS AWKEVVTTQF FSFKNPVESF LETRSFSLKL KEGGLTSRTN SFKSENPQEK SPKTGMERSL SFNSWEIVTE VETEPMNKED EEIVEPTKPA
101: RNSLNGRNCE RIQITKPTIT PPTPFVFFSP RPVTELDAAA TTLQKVYKSY RTRRNLADCA VVVEELWWKT LDAAALNLSS VAFFEEEKHE TAVSKWARAR
201: TRAAKVGKGL SKDEKAQKLA LQHWLEAIDP RHRYGHNLHF YYDVWSASMS AQPFFYWLDI GDGKDVNLEH HPRSVLQKQC IKYLGPLERE AYEVIVEDGK
301: LMNKQSMTLI NSTEDSKSIF VLSTTRTLYV GQKKKGRFQH SSFLSGGATT AAGRLVAREG ILEAIWPYSG HYLPTEDNFN EFISFLEENN VDMTNVKRCS
401: VNEEYSSFNS SGYEEEATKE EEAEKKPAET IVTEEQEEEK ERERPVFQLA KRLSCKWNSG VGPRIGCVRD YPMELQSQAF EQVSLSPRIS PGSTRFPSPY
501: GPIPSPRPSP RVRVSPRLAY MGIPSPRVQV NC

Arabidopsis Description

IQM4IQ domain-containing protein IQM4 [Source:UniProtKB/Swiss-Prot;Acc:O64851]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.