Factsheet for TraesCS3D01G209200.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G308700.1
TraesCS1A01G308800.1
TraesCS1B01G319300.1
TraesCS1D01G308000.1
TraesCS2B01G113800.2
TraesCS3A01G184500.1
TraesCS3A01G191900.1
TraesCS3A01G335000.1
TraesCS3B01G219900.1
TraesCS3B01G365900.1
TraesCS3D01G188600.1
TraesCS3D01G194500.2
TraesCS3D01G328300.1
TraesCS4B01G131100.1
TraesCS4D01G126100.1
TraesCS5A01G057100.1
TraesCS5A01G057200.1
TraesCS5A01G139700.1
TraesCS5B01G059900.1
TraesCS5B01G137100.1
TraesCS5D01G068000.1
TraesCS5D01G068100.1
TraesCS5D01G153400.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G57010.1	TraesCS1A01G308700.1	AT5G21274.1	21798944
AT5G57010.1	TraesCS1A01G308800.1	AT5G21274.1	21798944
AT5G57010.1	TraesCS1B01G319300.1	AT5G21274.1	21798944
AT5G57010.1	TraesCS1D01G308000.1	AT5G21274.1	21798944
AT5G57010.1	TraesCS2B01G113800.2	AT5G21274.1	21798944
AT5G57010.1	TraesCS3A01G184500.1	AT5G21274.1	21798944
AT5G57010.1	TraesCS3A01G191900.1	AT5G21274.1	21798944
AT5G57010.1	TraesCS3A01G335000.1	AT5G21274.1	21798944
AT5G57010.1	TraesCS3B01G219900.1	AT5G21274.1	21798944
AT5G57010.1	TraesCS3B01G365900.1	AT5G21274.1	21798944
AT5G57010.1	TraesCS3D01G188600.1	AT5G21274.1	21798944
AT5G57010.1	TraesCS3D01G194500.2	AT5G21274.1	21798944
AT5G57010.1	TraesCS3D01G328300.1	AT5G21274.1	21798944
AT5G57010.1	TraesCS4B01G131100.1	AT5G21274.1	21798944
AT5G57010.1	TraesCS4D01G126100.1	AT5G21274.1	21798944
AT5G57010.1	TraesCS5A01G057100.1	AT5G21274.1	21798944
AT5G57010.1	TraesCS5A01G057200.1	AT5G21274.1	21798944
AT5G57010.1	TraesCS5A01G139700.1	AT5G21274.1	21798944
AT5G57010.1	TraesCS5B01G059900.1	AT5G21274.1	21798944
AT5G57010.1	TraesCS5B01G137100.1	AT5G21274.1	21798944
AT5G57010.1	TraesCS5D01G068000.1	AT5G21274.1	21798944
AT5G57010.1	TraesCS5D01G068100.1	AT5G21274.1	21798944
AT5G57010.1	TraesCS5D01G153400.1	AT5G21274.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G206400.1	Wheat	plastid	97.1	96.4
TraesCS3B01G238500.1	Wheat	cytosol, plastid	94.38	96.3
HORVU3Hr1G049640.1	Barley	plastid	94.2	94.37
Os01t0570800-01	Rice	plastid	81.34	78.91
Zm00001d044253_P001	Maize	plastid	67.93	66.73
EES03151	Sorghum	mitochondrion, plastid	69.57	66.67
CDX75320	Canola	endoplasmic reticulum, extracellular	42.03	64.09
Bra017264.1-P	Field mustard	endoplasmic reticulum, extracellular	37.68	61.18
Zm00001d011228_P001	Maize	plastid	60.87	61.09
CDX68935	Canola	plastid	49.09	57.78
VIT_09s0002g04560.t01	Wine grape	cytosol	32.79	57.28
Bra011409.1-P	Field mustard	plastid	48.91	57.2
Solyc03g121770.1.1	Tomato	cytosol	27.54	56.93
GSMUA_Achr8P26270_001	Banana	plastid	48.37	55.62
CDX77035	Canola	plastid	48.01	55.32
GSMUA_Achr3P25890_001	Banana	mitochondrion	51.09	54.44
GSMUA_Achr8P05470_001	Banana	plastid	48.73	53.91
KRH19209	Soybean	cytosol	26.45	53.87
VIT_04s0008g01070.t01	Wine grape	cytosol, extracellular, nucleus	52.17	53.33
CDY45026	Canola	cytosol	48.91	52.43
CDY35312	Canola	plastid	49.64	52.39
Bra034295.1-P	Field mustard	plastid	49.46	52.1
VIT_11s0016g01970.t01	Wine grape	cytosol	50.18	51.78
AT2G26190.1	Thale cress	plastid	49.64	51.5
KRH12419	Soybean	cytosol, plastid	48.55	50.85
KRH02687	Soybean	plastid	48.55	50.57
KRH37419	Soybean	cytosol, extracellular, nucleus, plastid	48.19	50.38
AT5G57010.1	Thale cress	cytosol	45.11	50.3
Bra034546.1-P	Field mustard	cytosol	49.09	49.27
AT4G33050.5	Thale cress	plastid	49.28	48.57
CDY28281	Canola	cytosol, plastid	48.91	48.47
Bra002773.1-P	Field mustard	cytosol	44.02	47.93
KRH47098	Soybean	nucleus	43.12	47.7
KRH44122	Soybean	nucleus	42.93	47.4
TraesCS1D01G128400.2	Wheat	nucleus	45.83	45.42
KRH23287	Soybean	cytosol	41.3	44.88
KRH10031	Soybean	cytosol	36.59	42.89
PGSC0003DMT400006372	Potato	endoplasmic reticulum, extracellular, golgi	23.73	42.81
Bra035643.1-P	Field mustard	cytosol	43.66	42.73
TraesCS6D01G097300.1	Wheat	cytosol	35.33	40.29
TraesCS5D01G137100.1	Wheat	cytosol	34.78	40.0
TraesCS2D01G160200.1	Wheat	cytosol	40.4	39.05
TraesCS6D01G093400.1	Wheat	cytosol	33.15	38.12
TraesCS5D01G385200.2	Wheat	cytosol	36.96	36.62
TraesCS4D01G281600.1	Wheat	nucleus	39.13	35.24
VIT_09s0002g01680.t01	Wine grape	plastid	48.73	26.69

Protein Annotations

EnsemblPlants:TraesCS3D01G209200.2	EnsemblPlantsGene:TraesCS3D01G209200	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000048
InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR31250	PANTHER:PTHR31250:SF1	PFscan:PS50096	SEG:seg	MapMan:35.1

Description

No Description!

Coordinates

chr3D:-:276574961..276577234

Molecular Weight (calculated)

61828.6 Da

IEP (calculated)

9.707

GRAVY (calculated)

-0.598

Length

552 amino acids

Sequence
(BLAST)

001: MSSLRPLNTE PSFLHSPKLQ SPRDACAAPL RSPSPRVVAG PPKKRMARAG GLLERSLSFK NWEAEVGADE PEAATRSING ARPGTLLLHS PGSKQQQSPS
101: KAHFVSPRPQ AELDDAATKV QKLFKGHRTR RNLADCAIVV EELWWKAYDS ASLNIKSISF FDEAKQETAA SRWSRAGKRI AKVGKGLSKD EKAQKLALQH
201: WLEAIDPRHR YGHNLHLYYD IWSASSSTEP FFYWLDIGAG KDVHHQKCPR SKLYSQLIMY LGPNERARYE VIVDQGKLMY RRSGLLVETT EDSKWIFVLS
301: TTRSLYIGQK KKGKFQHSSF LAGAATTAAG RLVAKDGILK AIWPYSGHYL PTEENFREFI SFLEENNVDL ANVKRCSVDD DEYPSFKKTS DEPTEMEEHD
401: EKPTEAQHDG TLNSSQIELP EMDIIKEMVA EDNAETEAAA TKMASLPSFK WATAAGARIG CVRDYPADLQ SMALEHVNLS PRVVPSPSAN RLPIPSPRPS
501: PKIRLSPRLH YMGLPTPTGR RLPIPSPEIR RQQFMGFQTP EVSLTLPKHK AK

Best Arabidopsis Sequence Match ( AT4G33050.3 )
(BLAST)

001: MGLEVGSLCF KLKDGGLTSR TNSFKRDDTN RHQNSPKSTM ERSLSFNSWE VPKETKTDSD FEVLETKKST PNTLNGRNCE RIQIKKPTVT PPEPFVFFSP
101: RPVTELDAAA TTLQKVYKSY RTRRNLADCA VVVEELWWRT LEGAALDLSS VSFFGEEKHE TAVSKWARAR KRAAKVGKGL SKDEKAQKLA LQHWLEAIDP
201: RHRYGHNLHF YYDVWSASKS TQPFFYWLDI GDGKDVNLEK HPRSVLQKQC IRYLGPMERE AYEVIVEDGR LMYKQGMTLI NSTEEAKSIF VLSTTRNLYV
301: GIKKKGLFQH SSFLSGGATT AAGRLVARDG ILEAIWPYSG HYLPTEDNFK EFISFLEEHN VDLTNVKRCS VNEEYSSFKS TADEEEERKE VSEEVEIPSE
401: KEERARPVFD PVKRLSCKWT SGYGPRIGCV RDYPMELQAQ ALEQVSLSPR VSPANSYGPI PSPRPSPKVR VSPRLAYMGI PSPRAVKC

Arabidopsis Description

EDA39calmodulin-binding family protein [Source:TAIR;Acc:AT4G33050]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.