Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- nucleus 3
- extracellular 3
- plastid 1
- endoplasmic reticulum 3
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX75320 | Canola | endoplasmic reticulum, extracellular | 98.53 | 92.54 |
| Bra011409.1-P | Field mustard | plastid | 98.24 | 70.76 |
| Bra034546.1-P | Field mustard | cytosol | 89.41 | 55.27 |
| Zm00001d036000_P001 | Maize | cytosol | 22.35 | 53.9 |
| AT4G33050.5 | Thale cress | plastid | 87.65 | 53.21 |
| Bra034295.1-P | Field mustard | plastid | 80.0 | 51.91 |
| Zm00001d050807_P001 | Maize | cytosol | 20.29 | 48.25 |
| KRH19209 | Soybean | cytosol | 38.24 | 47.97 |
| PGSC0003DMT400021177 | Potato | cytosol, mitochondrion, nucleus, plastid | 67.35 | 46.73 |
| GSMUA_Achr4P09170_001 | Banana | cytosol | 62.94 | 44.03 |
| VIT_04s0008g01070.t01 | Wine grape | cytosol, extracellular, nucleus | 68.82 | 43.33 |
| GSMUA_Achr8P26270_001 | Banana | plastid | 60.29 | 42.71 |
| GSMUA_Achr8P05470_001 | Banana | plastid | 61.47 | 41.88 |
| GSMUA_Achr8P24930_001 | Banana | cytosol | 47.35 | 41.82 |
| KRH02687 | Soybean | plastid | 64.71 | 41.51 |
| KRH12419 | Soybean | cytosol, plastid | 64.12 | 41.37 |
| KRH37419 | Soybean | cytosol, extracellular, nucleus, plastid | 63.53 | 40.91 |
| GSMUA_Achr3P25890_001 | Banana | mitochondrion | 62.06 | 40.73 |
| GSMUA_Achr4P08700_001 | Banana | extracellular, nucleus, plastid, vacuole | 62.65 | 39.74 |
| Solyc08g062930.1.1 | Tomato | cytosol | 45.29 | 39.49 |
| TraesCS3B01G238500.1 | Wheat | cytosol, plastid | 62.06 | 39.0 |
| Zm00001d009755_P001 | Maize | plastid | 50.0 | 38.12 |
| Zm00001d042156_P001 | Maize | mitochondrion | 21.18 | 37.89 |
| TraesCS3D01G209200.2 | Wheat | plastid | 61.18 | 37.68 |
| Bra002773.1-P | Field mustard | cytosol | 56.18 | 37.67 |
| TraesCS3A01G206400.1 | Wheat | plastid | 61.47 | 37.59 |
| Bra021491.1-P | Field mustard | nucleus | 54.41 | 37.53 |
| Os01t0570800-01 | Rice | plastid | 62.06 | 37.08 |
| HORVU3Hr1G049640.1 | Barley | plastid | 60.0 | 37.02 |
| EES03151 | Sorghum | mitochondrion, plastid | 60.29 | 35.59 |
| Zm00001d044253_P001 | Maize | plastid | 58.53 | 35.41 |
| Bra035643.1-P | Field mustard | cytosol | 57.35 | 34.57 |
| EES18807 | Sorghum | plastid | 55.88 | 33.04 |
| Bra001512.1-P | Field mustard | cytosol | 50.29 | 32.33 |
| Bra027414.1-P | Field mustard | nucleus | 53.82 | 31.77 |
| Zm00001d011228_P001 | Maize | plastid | 50.29 | 31.09 |
| Bra014570.1-P | Field mustard | nucleus | 51.18 | 30.91 |
| Bra019642.1-P | Field mustard | cytosol | 40.29 | 30.04 |
| Bra028537.1-P | Field mustard | cytosol | 40.29 | 30.04 |
| GSMUA_Achr3P32310_001 | Banana | endoplasmic reticulum | 60.29 | 22.75 |
Protein Annotations
Description
AT4G33050 (E=3e-144) EDA39 | EDA39 (embryo sac development arrest 39); calmodulin binding
Coordinates
chrA04:+:15678040..15679799
Molecular Weight (calculated)
38898.2 Da
IEP (calculated)
8.430
GRAVY (calculated)
-0.547
Length
340 amino acids
Sequence
(BLAST)
(BLAST)
001: MIHILFFFLM WKTLDGATLD LSSVSFFKEE KHEPAASKWT RARKRAAKID PRHRYGHNLH FYYDVWSASK SSQPFFYWLD IGDGKDVNLE KHPRSVLQKQ
101: CITYLGPMER EAYEVIVEDG RLLYKQSMSP INSTEESKSI FVLSTTRTLY VGKKKKGVFQ HSSFLSGGAT TAAGRLVARD GILEAIWPYS GHYLPTEENF
201: KEFISFLEEH NVDLTNVKRC AVNEEYSSSF KSIPDEEEEA KEISQEVEMP SEQEERARPM FDHAKRLSCK WSSGYGPRIG CVRDYPMELQ TQALEQVSLS
301: PRVSTANTYG PIPSPRPSPK VRVSPRLSYM GIPSPRAVKC
101: CITYLGPMER EAYEVIVEDG RLLYKQSMSP INSTEESKSI FVLSTTRTLY VGKKKKGVFQ HSSFLSGGAT TAAGRLVARD GILEAIWPYS GHYLPTEENF
201: KEFISFLEEH NVDLTNVKRC AVNEEYSSSF KSIPDEEEEA KEISQEVEMP SEQEERARPM FDHAKRLSCK WSSGYGPRIG CVRDYPMELQ TQALEQVSLS
301: PRVSTANTYG PIPSPRPSPK VRVSPRLSYM GIPSPRAVKC
001: MGLEVGSLCF KLKDGGLTSR TNSFKRDDTN RHQNSPKSTM ERSLSFNSWE VPKETKTDSD FEVLETKKST PNTLNGRNCE RIQIKKPTVT PPEPFVFFSP
101: RPVTELDAAA TTLQKVYKSY RTRRNLADCA VVVEELWWRT LEGAALDLSS VSFFGEEKHE TAVSKWARAR KRAAKVGKGL SKDEKAQKLA LQHWLEAIDP
201: RHRYGHNLHF YYDVWSASKS TQPFFYWLDI GDGKDVNLEK HPRSVLQKQC IRYLGPMERE AYEVIVEDGR LMYKQGMTLI NSTEEAKSIF VLSTTRNLYV
301: GIKKKGLFQH SSFLSGGATT AAGRLVARDG ILEAIWPYSG HYLPTEDNFK EFISFLEEHN VDLTNVKRCS VNEEYSSFKS TADEEEERKE VSEEVEIPSE
401: KEERARPVFD PVKRLSCKWT SGYGPRIGCV RDYPMELQAQ ALEQVSLSPR VSPANSYGPI PSPRPSPKVR VSPRLAYMGI PSPRAVKC
101: RPVTELDAAA TTLQKVYKSY RTRRNLADCA VVVEELWWRT LEGAALDLSS VSFFGEEKHE TAVSKWARAR KRAAKVGKGL SKDEKAQKLA LQHWLEAIDP
201: RHRYGHNLHF YYDVWSASKS TQPFFYWLDI GDGKDVNLEK HPRSVLQKQC IRYLGPMERE AYEVIVEDGR LMYKQGMTLI NSTEEAKSIF VLSTTRNLYV
301: GIKKKGLFQH SSFLSGGATT AAGRLVARDG ILEAIWPYSG HYLPTEDNFK EFISFLEEHN VDLTNVKRCS VNEEYSSFKS TADEEEERKE VSEEVEIPSE
401: KEERARPVFD PVKRLSCKWT SGYGPRIGCV RDYPMELQAQ ALEQVSLSPR VSPANSYGPI PSPRPSPKVR VSPRLAYMGI PSPRAVKC
Arabidopsis Description
EDA39calmodulin-binding family protein [Source:TAIR;Acc:AT4G33050]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.