Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d036000_P001 | Maize | cytosol | 75.52 | 76.6 |
| Zm00001d042156_P001 | Maize | mitochondrion | 91.61 | 68.95 |
| Solyc03g121770.1.1 | Tomato | cytosol | 52.45 | 28.09 |
| CDX75320 | Canola | endoplasmic reticulum, extracellular | 62.94 | 24.86 |
| PGSC0003DMT400006372 | Potato | endoplasmic reticulum, extracellular, golgi | 51.75 | 24.18 |
| VIT_09s0002g04560.t01 | Wine grape | cytosol | 53.15 | 24.05 |
| Zm00001d044253_P001 | Maize | plastid | 82.52 | 21.0 |
| Zm00001d009755_P001 | Maize | plastid | 65.03 | 20.85 |
| KRH19209 | Soybean | cytosol | 39.16 | 20.66 |
| Bra017264.1-P | Field mustard | endoplasmic reticulum, extracellular | 48.25 | 20.29 |
| Zm00001d004916_P001 | Maize | cytosol | 51.05 | 19.89 |
| GSMUA_Achr8P26270_001 | Banana | plastid | 65.03 | 19.38 |
| Bra011409.1-P | Field mustard | plastid | 62.94 | 19.07 |
| CDX68935 | Canola | plastid | 62.24 | 18.98 |
| Os01t0570800-01 | Rice | plastid | 74.83 | 18.8 |
| CDX77035 | Canola | plastid | 61.54 | 18.37 |
| KRH10031 | Soybean | cytosol | 60.14 | 18.26 |
| GSMUA_Achr8P05470_001 | Banana | plastid | 63.64 | 18.24 |
| GSMUA_Achr3P25890_001 | Banana | mitochondrion | 64.34 | 17.76 |
| CDY45026 | Canola | cytosol | 62.24 | 17.28 |
| KRH23287 | Soybean | cytosol | 60.84 | 17.13 |
| KRH12419 | Soybean | cytosol, plastid | 62.94 | 17.08 |
| KRH44122 | Soybean | nucleus | 59.44 | 17.0 |
| KRH02687 | Soybean | plastid | 62.94 | 16.98 |
| KRH37419 | Soybean | cytosol, extracellular, nucleus, plastid | 62.24 | 16.86 |
| VIT_04s0008g01070.t01 | Wine grape | cytosol, extracellular, nucleus | 63.64 | 16.85 |
| Bra034295.1-P | Field mustard | plastid | 61.54 | 16.79 |
| CDY35312 | Canola | plastid | 60.84 | 16.63 |
| KRH47098 | Soybean | nucleus | 58.04 | 16.63 |
| VIT_11s0016g01970.t01 | Wine grape | cytosol | 61.54 | 16.45 |
| AT2G26190.1 | Thale cress | plastid | 60.84 | 16.35 |
| Bra034546.1-P | Field mustard | cytosol | 62.24 | 16.18 |
| Bra002773.1-P | Field mustard | cytosol | 57.34 | 16.17 |
| AT5G57010.1 | Thale cress | cytosol | 55.94 | 16.16 |
| CDY28281 | Canola | cytosol, plastid | 62.24 | 15.98 |
| AT4G33050.5 | Thale cress | plastid | 62.24 | 15.89 |
| Zm00001d037759_P002 | Maize | mitochondrion | 61.54 | 15.88 |
| Zm00001d052525_P001 | Maize | cytosol | 51.05 | 15.6 |
| Zm00001d047402_P001 | Maize | cytosol | 58.04 | 15.43 |
| Zm00001d035377_P001 | Maize | cytosol | 44.76 | 14.68 |
| Zm00001d011228_P001 | Maize | plastid | 55.24 | 14.36 |
| Bra035643.1-P | Field mustard | cytosol | 55.24 | 14.01 |
| Zm00001d022245_P001 | Maize | cytosol | 58.04 | 12.56 |
| Zm00001d032981_P001 | Maize | cytosol | 56.64 | 12.35 |
| Zm00001d024699_P001 | Maize | nucleus | 27.27 | 12.34 |
| Zm00001d027815_P002 | Maize | nucleus | 53.85 | 11.99 |
| VIT_09s0002g01680.t01 | Wine grape | plastid | 60.84 | 8.63 |
Protein Annotations
| EnsemblPlants:Zm00001d050807_P001 | EnsemblPlants:Zm00001d050807_T001 | EnsemblPlantsGene:Zm00001d050807 | PANTHER:PTHR31250 | PANTHER:PTHR31250:SF1 | ProteinID:AQK53077.1 |
| UniParc:UPI0008429BA0 | UniProt:A0A1D6Q3D6 | MapMan:35.1 | : | : | : |
Description
IQ domain-containing protein IQM5
Coordinates
chr4:+:123978579..123979350
Molecular Weight (calculated)
16496.7 Da
IEP (calculated)
7.096
GRAVY (calculated)
-0.342
Length
143 amino acids
Sequence
(BLAST)
(BLAST)
001: MIEVAKVGKG LSKDDKAQKI ALQHWLEAID PCHRYDHNLH LYYDILCASS SCEPFFYWLD VGKGRDLHHQ KCPRSKLNSQ LIMYLGPNER AAYEVVVEEG
101: RLLYKQSGDL VNTNEESKWI FVLSTSKSLY VRLQSECSVQ LAF
101: RLLYKQSGDL VNTNEESKWI FVLSTSKSLY VRLQSECSVQ LAF
001: MGLSLSLLLS AWKEVVTTQF FSFKNPVESF LETRSFSLKL KEGGLTSRTN SFKSENPQEK SPKTGMERSL SFNSWEIVTE VETEPMNKED EEIVEPTKPA
101: RNSLNGRNCE RIQITKPTIT PPTPFVFFSP RPVTELDAAA TTLQKVYKSY RTRRNLADCA VVVEELWWKT LDAAALNLSS VAFFEEEKHE TAVSKWARAR
201: TRAAKVGKGL SKDEKAQKLA LQHWLEAIDP RHRYGHNLHF YYDVWSASMS AQPFFYWLDI GDGKDVNLEH HPRSVLQKQC IKYLGPLERE AYEVIVEDGK
301: LMNKQSMTLI NSTEDSKSIF VLSTTRTLYV GQKKKGRFQH SSFLSGGATT AAGRLVAREG ILEAIWPYSG HYLPTEDNFN EFISFLEENN VDMTNVKVRN
401: IIFGCIHAKY EKWYVLTYLI
101: RNSLNGRNCE RIQITKPTIT PPTPFVFFSP RPVTELDAAA TTLQKVYKSY RTRRNLADCA VVVEELWWKT LDAAALNLSS VAFFEEEKHE TAVSKWARAR
201: TRAAKVGKGL SKDEKAQKLA LQHWLEAIDP RHRYGHNLHF YYDVWSASMS AQPFFYWLDI GDGKDVNLEH HPRSVLQKQC IKYLGPLERE AYEVIVEDGK
301: LMNKQSMTLI NSTEDSKSIF VLSTTRTLYV GQKKKGRFQH SSFLSGGATT AAGRLVAREG ILEAIWPYSG HYLPTEDNFN EFISFLEENN VDMTNVKVRN
401: IIFGCIHAKY EKWYVLTYLI
Arabidopsis Description
IQM4IQ domain-containing protein IQM4 [Source:UniProtKB/Swiss-Prot;Acc:O64851]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.