Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d050807_P001 | Maize | cytosol | 76.6 | 75.52 |
| Zm00001d042156_P001 | Maize | mitochondrion | 82.27 | 61.05 |
| Solyc03g121770.1.1 | Tomato | cytosol | 46.1 | 24.34 |
| Bra017264.1-P | Field mustard | endoplasmic reticulum, extracellular | 53.9 | 22.35 |
| CDX75320 | Canola | endoplasmic reticulum, extracellular | 54.61 | 21.27 |
| PGSC0003DMT400006372 | Potato | endoplasmic reticulum, extracellular, golgi | 46.1 | 21.24 |
| VIT_09s0002g04560.t01 | Wine grape | cytosol | 44.68 | 19.94 |
| Zm00001d044253_P001 | Maize | plastid | 75.89 | 19.04 |
| Zm00001d009755_P001 | Maize | plastid | 57.45 | 18.16 |
| Os01t0570800-01 | Rice | plastid | 68.79 | 17.05 |
| GSMUA_Achr8P26270_001 | Banana | plastid | 57.45 | 16.88 |
| Zm00001d004916_P001 | Maize | cytosol | 43.26 | 16.62 |
| KRH10031 | Soybean | cytosol | 54.61 | 16.35 |
| Bra011409.1-P | Field mustard | plastid | 54.61 | 16.31 |
| CDX68935 | Canola | plastid | 53.9 | 16.2 |
| CDX77035 | Canola | plastid | 52.48 | 15.45 |
| GSMUA_Achr3P25890_001 | Banana | mitochondrion | 56.74 | 15.44 |
| GSMUA_Achr8P05470_001 | Banana | plastid | 54.61 | 15.43 |
| VIT_04s0008g01070.t01 | Wine grape | cytosol, extracellular, nucleus | 56.74 | 14.81 |
| KRH23287 | Soybean | cytosol | 53.19 | 14.76 |
| KRH12419 | Soybean | cytosol, plastid | 53.9 | 14.42 |
| KRH44122 | Soybean | nucleus | 51.06 | 14.4 |
| CDY45026 | Canola | cytosol | 52.48 | 14.37 |
| KRH02687 | Soybean | plastid | 53.9 | 14.34 |
| KRH47098 | Soybean | nucleus | 50.35 | 14.23 |
| VIT_11s0016g01970.t01 | Wine grape | cytosol | 53.9 | 14.21 |
| KRH37419 | Soybean | cytosol, extracellular, nucleus, plastid | 52.48 | 14.02 |
| CDY35312 | Canola | plastid | 51.77 | 13.96 |
| AT4G33050.5 | Thale cress | plastid | 54.61 | 13.75 |
| Bra034295.1-P | Field mustard | plastid | 51.06 | 13.74 |
| AT2G26190.1 | Thale cress | plastid | 51.77 | 13.72 |
| KRH19209 | Soybean | cytosol | 26.24 | 13.65 |
| Bra002773.1-P | Field mustard | cytosol | 48.94 | 13.61 |
| AT5G57010.1 | Thale cress | cytosol | 47.52 | 13.54 |
| Bra034546.1-P | Field mustard | cytosol | 52.48 | 13.45 |
| Zm00001d037759_P002 | Maize | mitochondrion | 52.48 | 13.36 |
| Zm00001d035377_P001 | Maize | cytosol | 41.13 | 13.3 |
| CDY28281 | Canola | cytosol, plastid | 52.48 | 13.29 |
| Zm00001d052525_P001 | Maize | cytosol | 43.26 | 13.03 |
| Zm00001d047402_P001 | Maize | cytosol | 49.65 | 13.01 |
| Zm00001d011228_P001 | Maize | plastid | 46.81 | 12.0 |
| Bra035643.1-P | Field mustard | cytosol | 47.52 | 11.88 |
| Zm00001d027815_P002 | Maize | nucleus | 47.52 | 10.44 |
| Zm00001d032981_P001 | Maize | cytosol | 48.23 | 10.37 |
| Zm00001d022245_P001 | Maize | cytosol | 48.23 | 10.29 |
| Zm00001d024699_P001 | Maize | nucleus | 19.15 | 8.54 |
| VIT_09s0002g01680.t01 | Wine grape | plastid | 53.19 | 7.44 |
Protein Annotations
| EnsemblPlants:Zm00001d036000_P001 | EnsemblPlants:Zm00001d036000_T001 | EnsemblPlantsGene:Zm00001d036000 | PANTHER:PTHR31250 | PANTHER:PTHR31250:SF1 | ProteinID:AQK80108.1 |
| UniParc:UPI0008DB3463 | UniProt:A0A1D6LK67 | MapMan:35.1 | : | : | : |
Description
IQ domain-containing protein IQM5
Coordinates
chr6:+:65226988..65229647
Molecular Weight (calculated)
16853.0 Da
IEP (calculated)
8.604
GRAVY (calculated)
-0.654
Length
141 amino acids
Sequence
(BLAST)
(BLAST)
001: MWSPQEKNMR LENMTWRIWN LARKKEIDSR HRYGHNLHLY YDIWCANSSC EPFFYWLDVG KGRDLHHQKC PRSKLNSQLI MYLGPNERAA YEVVVEEGRL
101: LYKQSGDLVN TNEESKWIFV LSTSRSLYVR SQSECSVQLA F
101: LYKQSGDLVN TNEESKWIFV LSTSRSLYVR SQSECSVQLA F
001: MGLEVGSLCF KLKDGGLTSR TNSFKRDDTN RHQNSPKSTM ERSLSFNSWE VPKETKTDSD FEVLETKKST PNTLNGRNCE RIQIKKPTVT PPEPFVFFSP
101: RPVTELDAAA TTLQKVYKSY RTRRNLADCA VVVEELWWRT LEGAALDLSS VSFFGEEKHE TAVSKWARAR KRAAKVGKGL SKDEKAQKLA LQHWLEAVSP
201: HNLNIFVTSY QRQVPYLTSK AIIEYTLMIH LLKLQIDPRH RYGHNLHFYY DVWSASKSTQ PFFYWLDIGD GKDVNLEKHP RSVLQKQCIR YLGPMEREAY
301: EVIVEDGRLM YKQGMTLINS TEEAKSIFVL STTRNLYVGI KKKGLFQHSS FLSGGATTAA GRLVARDGIL EVLE
101: RPVTELDAAA TTLQKVYKSY RTRRNLADCA VVVEELWWRT LEGAALDLSS VSFFGEEKHE TAVSKWARAR KRAAKVGKGL SKDEKAQKLA LQHWLEAVSP
201: HNLNIFVTSY QRQVPYLTSK AIIEYTLMIH LLKLQIDPRH RYGHNLHFYY DVWSASKSTQ PFFYWLDIGD GKDVNLEKHP RSVLQKQCIR YLGPMEREAY
301: EVIVEDGRLM YKQGMTLINS TEEAKSIFVL STTRNLYVGI KKKGLFQHSS FLSGGATTAA GRLVARDGIL EVLE
Arabidopsis Description
EDA39calmodulin-binding family protein [Source:TAIR;Acc:AT4G33050]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.