Factsheet for Bra035643.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra002368.1-P
Bra006595.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G57010.1	Bra002368.1-P	AT5G21274.1	21798944
AT5G57010.1	Bra006595.1-P	AT5G21274.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT5G57010.1	Thale cress	cytosol	75.53	86.06
Bra002773.1-P	Field mustard	cytosol	74.82	83.23
VIT_09s0002g04560.t01	Wine grape	cytosol	33.33	59.49
Bra017264.1-P	Field mustard	endoplasmic reticulum, extracellular	34.57	57.35
Zm00001d050807_P001	Maize	cytosol	14.01	55.24
Bra011409.1-P	Field mustard	plastid	45.92	54.87
GSMUA_Achr4P09170_001	Banana	cytosol	46.99	54.53
GSMUA_Achr8P24930_001	Banana	cytosol	36.88	54.03
GSMUA_Achr8P05470_001	Banana	plastid	45.92	51.9
GSMUA_Achr8P26270_001	Banana	plastid	43.97	51.67
KRH47098	Soybean	nucleus	45.39	51.3
KRH44122	Soybean	nucleus	45.04	50.8
GSMUA_Achr3P25890_001	Banana	mitochondrion	46.28	50.39
GSMUA_Achr4P08700_001	Banana	extracellular, nucleus, plastid, vacuole	47.7	50.19
Bra034295.1-P	Field mustard	plastid	45.57	49.05
KRH23287	Soybean	cytosol	43.26	48.03
Zm00001d036000_P001	Maize	cytosol	11.88	47.52
Bra034546.1-P	Field mustard	cytosol	45.21	46.36
KRH10031	Soybean	cytosol	38.48	46.07
Zm00001d009755_P001	Maize	plastid	36.35	45.96
Zm00001d042156_P001	Maize	mitochondrion	15.07	44.74
TraesCS3B01G238500.1	Wheat	cytosol, plastid	42.91	44.73
TraesCS3A01G206400.1	Wheat	plastid	43.09	43.7
TraesCS3D01G209200.2	Wheat	plastid	42.73	43.66
HORVU3Hr1G049640.1	Barley	plastid	42.38	43.38
Os01t0570800-01	Rice	plastid	43.09	42.71
Zm00001d044253_P001	Maize	plastid	42.55	42.7
EES03151	Sorghum	mitochondrion, plastid	42.91	42.01
Bra021491.1-P	Field mustard	nucleus	36.35	41.58
EES18807	Sorghum	plastid	40.25	39.48
Bra019642.1-P	Field mustard	cytosol	31.91	39.47
Bra028537.1-P	Field mustard	cytosol	31.56	39.04
Bra027414.1-P	Field mustard	nucleus	39.18	38.37
Zm00001d011228_P001	Maize	plastid	37.23	38.18
Bra014570.1-P	Field mustard	nucleus	36.7	36.77
Bra001512.1-P	Field mustard	cytosol	33.69	35.92
GSMUA_Achr3P32310_001	Banana	endoplasmic reticulum	45.21	28.3
VIT_09s0002g01680.t01	Wine grape	plastid	48.58	27.18

Protein Annotations

EnsemblPlants:Bra035643.1	EnsemblPlants:Bra035643.1-P	EnsemblPlantsGene:Bra035643	PANTHER:PTHR31250	PANTHER:PTHR31250:SF1	SEG:seg
UniParc:UPI00025460C1	UniProt:M4F3J3	MapMan:35.1	:	:	:

Description

AT5G57010 (E=3e-211) | calmodulin-binding family protein

Coordinates

chrA02:-:7000468..7003446

Molecular Weight (calculated)

63681.8 Da

IEP (calculated)

9.152

GRAVY (calculated)

-0.618

Length

564 amino acids

Sequence
(BLAST)

001: MALSFGFLQR DNSFKKDSQE CKTPRVLNNP VNMFLEKTLS FKDLVDQGTN YKDESFGVKT RKGINLKGPK PDNMVLERSL SFTSLVQVEN REEEDDDERG
101: SPPKRRNKGK MGIIGNLTAL SVPAPKPFWS PRPSTELDAA ALTLQKVYKS YRTRRNLADC AVVVEELWWK ELELAASEPN RTSQKPETAV SRWARAGTKA
201: AKLGKGLLKD DKAQKLALRH WLEAIDPRHR YGHNLHLYYD VWSESESTQP FFFWLDIGDG KEVNLTKCPR TLLQRQCITY LGPKERQAYE VVVEGGRLVN
301: RQNKNFIETV EGTKWIFVLS TARKLYIGQK QKGRFQHSSF LSGAAIIAAG RIVSHDGVLE AVWPYSGHYL PTEENFREFI DFLKENHVDL TNVKLNAIDD
401: DNHMVCNDGS TKPSISNGRD ETKAITDDAT ADDLREQKRF PCKWSTGNGP RIGCVRDYPM DLQTRALEQV NLSPRVVNMT MGLFGPIPSP RPSPKIRVSP
501: SFQDCSLKSS GLVVVDGPWM QTHSGFDPPA AETKSHCSAH HGCGYVRMKT RERACRGLHL LPEG

Best Arabidopsis Sequence Match ( AT5G57010.1 )
(BLAST)

001: MALSFGYLQR DNSFKKDSQE CETPRIRKTP VNMYLEKTLS FKDLVDQRNN YRDGNCGVKT RKGINLKGPK PDNMILDRSL SFTSLVQVEN RGGEEEDERG
101: SSPKRRNRGN LTALSLPAPT PFWSPRPSTE LDAAAVTLQK VYKSYRTRRN LADCAVVVEE LWWKELELAK LEPNKTNDKP ESAVSRWARA GTKAAKVGKG
201: LLKDDKAQKL ALRHWLEAID PRHRYGHNLH LYYDVWSESE STQPFFFWLD IGDGKEVNLN KCSRTLLQRQ CITYLGPKER QAYEVVVEDG KLVSRQTKSL
301: VETTEGTKWI FVLSTTRKLY IGQKQKGRFQ HSSFLSGAAI TAAGRIVSHD GVVKAVWPYS GHYLPTEENF REFICFLREN HVNLTNVKMN AIDDDDHLVN
401: NDGSTKPSMM VAKSDGSDEQ KRFSCKWSTG NGPRIGCVRD YPMDLQTRAL EQVNLSPRVV NGTMGLFGPI PSPRPSPKIR VSPRLSCMGL PSPRH

Arabidopsis Description

IQM5IQ domain-containing protein IQM5 [Source:UniProtKB/Swiss-Prot;Acc:Q058N0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.