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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 6
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:plastid
ChloroP:plastid
iPSORT:plastid
MultiLoc:plastid
Predotar:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
HORVU0Hr1G001280.1
HORVU2Hr1G016740.4
HORVU3Hr1G038010.1
HORVU3Hr1G079210.4
HORVU4Hr1G026290.3
HORVU5Hr1G014060.1
HORVU5Hr1G014070.2
HORVU5Hr1G044710.4

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G57010.1 HORVU0Hr1G001280.1 AT5G21274.1 21798944
AT5G57010.1 HORVU2Hr1G016740.4 AT5G21274.1 21798944
AT5G57010.1 HORVU3Hr1G038010.1 AT5G21274.1 21798944
AT5G57010.1 HORVU3Hr1G079210.4 AT5G21274.1 21798944
AT5G57010.1 HORVU4Hr1G026290.3 AT5G21274.1 21798944
AT5G57010.1 HORVU5Hr1G014060.1 AT5G21274.1 21798944
AT5G57010.1 HORVU5Hr1G014070.2 AT5G21274.1 21798944
AT5G57010.1 HORVU5Hr1G044710.4 AT5G21274.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3D01G209200.2 Wheat plastid 94.37 94.2
TraesCS3A01G206400.1 Wheat plastid 94.56 93.7
TraesCS3B01G238500.1 Wheat cytosol, plastid 91.29 92.98
Os01t0570800-01 Rice plastid 80.22 77.68
EES03151 Sorghum mitochondrion, plastid 69.51 66.49
Zm00001d044253_P001 Maize plastid 67.51 66.19
CDX75320 Canola endoplasmic reticulum, extracellular 41.38 62.98
Zm00001d011228_P001 Maize plastid 61.34 61.45
Bra017264.1-P Field mustard endoplasmic reticulum, extracellular 37.02 60.0
Solyc03g121770.1.1 Tomato cytosol 27.77 57.3
CDX68935 Canola plastid 48.28 56.72
VIT_09s0002g04560.t01 Wine grape cytosol 32.3 56.33
Bra011409.1-P Field mustard plastid 48.09 56.14
GSMUA_Achr8P26270_001 Banana plastid 48.09 55.21
CDX77035 Canola plastid 47.55 54.7
GSMUA_Achr3P25890_001 Banana mitochondrion 51.18 54.44
GSMUA_Achr8P05470_001 Banana plastid 48.28 53.31
VIT_04s0008g01070.t01 Wine grape cytosol, extracellular, nucleus 52.09 53.15
KRH19209 Soybean cytosol 26.13 53.14
CDY35312 Canola plastid 49.18 51.82
Bra034295.1-P Field mustard plastid 49.0 51.53
CDY45026 Canola cytosol 48.09 51.46
AT2G26190.1 Thale cress plastid 49.36 51.13
VIT_11s0016g01970.t01 Wine grape cytosol 49.55 51.03
HORVU2Hr1G074420.1 Barley cytosol 13.43 50.0
KRH12419 Soybean cytosol, plastid 47.73 49.91
KRH37419 Soybean cytosol, extracellular, nucleus, plastid 47.55 49.62
AT5G57010.1 Thale cress cytosol 44.46 49.49
KRH02687 Soybean plastid 47.55 49.43
Bra034546.1-P Field mustard cytosol 48.28 48.36
HORVU4Hr1G074540.1 Barley cytosol 21.78 47.81
HORVU1Hr1G045060.3 Barley nucleus 31.94 47.7
AT4G33050.5 Thale cress plastid 48.46 47.68
CDY28281 Canola cytosol, plastid 48.09 47.58
Bra002773.1-P Field mustard cytosol 43.38 47.14
KRH47098 Soybean nucleus 42.65 47.09
KRH44122 Soybean nucleus 42.65 47.0
HORVU2Hr1G015200.2 Barley cytosol 33.94 46.75
HORVU6Hr1G066990.1 Barley mitochondrion 12.89 46.1
KRH23287 Soybean cytosol 41.2 44.69
PGSC0003DMT400006372 Potato endoplasmic reticulum, extracellular, golgi 23.96 43.14
KRH10031 Soybean cytosol 36.84 43.1
HORVU7Hr1G052820.45 Barley cytosol 19.24 42.91
HORVU4Hr1G052500.37 Barley cytosol, nucleus 19.24 42.91
HORVU5Hr1G023670.50 Barley cytosol 19.06 42.51
Bra035643.1-P Field mustard cytosol 43.38 42.38
HORVU1Hr1G028900.11 Barley cytosol, mitochondrion, nucleus 45.19 40.89
HORVU6Hr1G019510.4 Barley cytosol 35.21 40.59
HORVU5Hr1G093140.18 Barley cytosol, nucleus 41.92 40.46
HORVU5Hr1G041930.15 Barley cytosol 35.21 40.17
HORVU2Hr1G028140.2 Barley cytosol 40.65 39.51
HORVU2Hr1G028150.1 Barley cytosol 40.65 37.9
HORVU5Hr1G120690.3 Barley nucleus 20.15 36.63
HORVU3Hr1G010590.3 Barley nucleus 19.78 36.45
HORVU4Hr1G074550.4 Barley cytosol 38.84 34.97
HORVU5Hr1G110660.2 Barley mitochondrion 5.99 26.61
VIT_09s0002g01680.t01 Wine grape plastid 48.64 26.59
HORVU2Hr1G074410.1 Barley cytosol, nucleus 6.53 24.66
Protein Annotations
EnsemblPlants:HORVU3Hr1G049640.1EnsemblPlantsGene:HORVU3Hr1G049640GO:GO:0003674GO:GO:0005488GO:GO:0005515InterPro:IPR000048
InterPro:IQ_motif_EF-hand-BSPANTHER:PTHR31250PANTHER:PTHR31250:SF1PFscan:PS50096SEG:segUniParc:UPI000B461E3E
UniProt:A0A287KZR6MapMan:35.1::::
Description
No Description!
Coordinates
chrchr3H:-:350511726..350515244
Molecular Weight (calculated)
61602.3 Da
IEP (calculated)
9.754
GRAVY (calculated)
-0.608
Length
551 amino acids
Sequence
(BLAST)
001: MSSLRPLNTD PSFLHSPKLQ SPRDACAAPL RSPSPRVVAG PPKKRMARAG GLLERSLSFK NWEAEVAADG PDTATRSING ARPGTLVLQS PGTKQSPRPS
101: PSKAHYISPR PHTQLDDAAT KVQKLFKGHR TRRNLADCAI VIEELWWKAY DSASLNIKSI SFFDEAKQET AASRWSRAGK RIAKVGKGLS KDEKAQKLAL
201: QHWLEAIDPR HRYGHNLHLY YDIWSASSST EPFFYWLDIG AGKDVHHQKC PRNKLYSQLI MYLGPNERAG YEVIVEQGKL MYRRSGLLVE TTEDSKWIFV
301: LSTARSLYIG QKKKGKFQHS SFLAGAATTA AGRLVAKDGI LKAIWPYSGH YLPTEENFRE FISFLEENNV DLANVKRCSV DDDEYPSLKK TSDEPSEMEE
401: HDEKPTEAQH DETTQIELPE MDIIKEVVAE DNAETEAAAT KMASLPSFKW ATAAGARIGC VRDYPADLQS MALEHVNLSP RLVPSPSANR LPIPSPRPSP
501: KTRLSPRLHY MGLPTPTGRR LPIPSPEIRR QQFMGFQTPE VALTLPKHKG K
Best Arabidopsis Sequence Match ( AT4G33050.3 )
(BLAST)
001: MGLEVGSLCF KLKDGGLTSR TNSFKRDDTN RHQNSPKSTM ERSLSFNSWE VPKETKTDSD FEVLETKKST PNTLNGRNCE RIQIKKPTVT PPEPFVFFSP
101: RPVTELDAAA TTLQKVYKSY RTRRNLADCA VVVEELWWRT LEGAALDLSS VSFFGEEKHE TAVSKWARAR KRAAKVGKGL SKDEKAQKLA LQHWLEAIDP
201: RHRYGHNLHF YYDVWSASKS TQPFFYWLDI GDGKDVNLEK HPRSVLQKQC IRYLGPMERE AYEVIVEDGR LMYKQGMTLI NSTEEAKSIF VLSTTRNLYV
301: GIKKKGLFQH SSFLSGGATT AAGRLVARDG ILEAIWPYSG HYLPTEDNFK EFISFLEEHN VDLTNVKRCS VNEEYSSFKS TADEEEERKE VSEEVEIPSE
401: KEERARPVFD PVKRLSCKWT SGYGPRIGCV RDYPMELQAQ ALEQVSLSPR VSPANSYGPI PSPRPSPKVR VSPRLAYMGI PSPRAVKC
Arabidopsis Description
EDA39calmodulin-binding family protein [Source:TAIR;Acc:AT4G33050]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.