Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G074420.1 | Barley | cytosol | 38.21 | 95.27 |
| HORVU2Hr1G015200.2 | Barley | cytosol | 75.34 | 69.5 |
| HORVU5Hr1G093140.18 | Barley | cytosol, nucleus | 94.85 | 61.3 |
| HORVU3Hr1G010590.3 | Barley | nucleus | 46.61 | 57.53 |
| HORVU5Hr1G120690.3 | Barley | nucleus | 47.15 | 57.43 |
| HORVU4Hr1G074540.1 | Barley | cytosol | 39.02 | 57.37 |
| TraesCS5A01G375700.1 | Wheat | cytosol | 82.11 | 56.74 |
| HORVU6Hr1G066990.1 | Barley | mitochondrion | 21.68 | 51.95 |
| HORVU7Hr1G052820.45 | Barley | cytosol | 33.06 | 49.39 |
| HORVU5Hr1G023670.50 | Barley | cytosol | 33.06 | 49.39 |
| HORVU4Hr1G052500.37 | Barley | cytosol, nucleus | 33.06 | 49.39 |
| TraesCS5D01G385200.2 | Wheat | cytosol | 73.98 | 49.01 |
| EER92212 | Sorghum | cytosol | 75.07 | 48.26 |
| Os03t0374500-00 | Rice | nucleus | 75.07 | 48.01 |
| Zm00001d047402_P001 | Maize | cytosol | 68.56 | 47.03 |
| HORVU2Hr1G028140.2 | Barley | cytosol | 69.65 | 45.33 |
| HORVU2Hr1G028150.1 | Barley | cytosol | 69.65 | 43.49 |
| Bra021491.1-P | Field mustard | nucleus | 55.83 | 41.78 |
| VIT_08s0007g07190.t01 | Wine grape | cytosol | 51.49 | 35.65 |
| Bra027414.1-P | Field mustard | nucleus | 55.28 | 35.42 |
| Bra014570.1-P | Field mustard | nucleus | 53.93 | 35.35 |
| KRH71773 | Soybean | nucleus | 53.39 | 35.18 |
| KRG97321 | Soybean | nucleus | 52.85 | 34.88 |
| HORVU4Hr1G074550.4 | Barley | cytosol | 57.72 | 34.8 |
| AT3G58480.1 | Thale cress | nucleus | 53.66 | 34.43 |
| Solyc01g044420.2.1 | Tomato | nucleus | 53.66 | 34.38 |
| HORVU5Hr1G041930.15 | Barley | cytosol | 44.99 | 34.37 |
| HORVU6Hr1G019510.4 | Barley | cytosol | 43.9 | 33.89 |
| AT3G13600.1 | Thale cress | nucleus | 55.56 | 33.88 |
| PGSC0003DMT400080788 | Potato | nucleus | 49.59 | 33.58 |
| KRH38004 | Soybean | cytosol | 52.85 | 32.77 |
| Bra001512.1-P | Field mustard | cytosol | 46.88 | 32.7 |
| HORVU3Hr1G049640.1 | Barley | plastid | 47.7 | 31.94 |
| KRH58931 | Soybean | nucleus | 56.64 | 31.86 |
| KRH42833 | Soybean | cytosol | 56.1 | 31.32 |
| VIT_06s0004g00690.t01 | Wine grape | nucleus | 56.1 | 30.9 |
| Solyc01g005800.2.1 | Tomato | nucleus | 54.47 | 30.41 |
| Solyc10g078650.1.1 | Tomato | nucleus | 49.86 | 30.31 |
| Solyc10g080640.1.1 | Tomato | nucleus | 51.49 | 30.02 |
| HORVU1Hr1G028900.11 | Barley | cytosol, mitochondrion, nucleus | 48.24 | 29.23 |
| PGSC0003DMT400021529 | Potato | cytosol | 50.14 | 28.91 |
| TraesCS2B01G401000.1 | Wheat | plastid | 24.66 | 26.22 |
| PGSC0003DMT400060938 | Potato | nucleus, plastid | 46.07 | 24.25 |
| HORVU2Hr1G074410.1 | Barley | cytosol, nucleus | 8.94 | 22.6 |
| HORVU5Hr1G110660.2 | Barley | mitochondrion | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:HORVU1Hr1G045060.3 | EnsemblPlantsGene:HORVU1Hr1G045060 | PANTHER:PTHR31250 | PANTHER:PTHR31250:SF16 | UniParc:UPI000B47B288 | UniProt:A0A287FD59 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr1H:-:327042857..327045264
Molecular Weight (calculated)
42236.5 Da
IEP (calculated)
7.066
GRAVY (calculated)
-0.781
Length
369 amino acids
Sequence
(BLAST)
(BLAST)
001: MPRALARLRD ADGESPRHEA ATLRLQKVYK SFRTQRQLAD CAVLVEQSWW KLLDFALLNR TPVSFFDIEK QETAVSKWSR ARSRAVKVGK GLSKDDKAQK
101: LASQHWLEEI DLRHRYGHNL HYYYDCWLHS ESKQPFYYWL DVGEGKEINL EGKCSRSKLM SQCIKYLGLK EREDYEVVIE DSKFMYRKSR QIIDTSFGPK
201: DAKWIFVLST SKSLYVGQKK KGKFQHSSFL AEGATSAAGR LVAENGTLKA IWPHGAHYRP TEENFQEFKS FLKDNLVDLT DVKMSPAEED EEFWGSLKRI
301: ASENDKYEDD PVAPEETGPL QKAQLVQTTS TESEKREEPA VATPGSSEDA KATEASTSSH MSENDLQKG
101: LASQHWLEEI DLRHRYGHNL HYYYDCWLHS ESKQPFYYWL DVGEGKEINL EGKCSRSKLM SQCIKYLGLK EREDYEVVIE DSKFMYRKSR QIIDTSFGPK
201: DAKWIFVLST SKSLYVGQKK KGKFQHSSFL AEGATSAAGR LVAENGTLKA IWPHGAHYRP TEENFQEFKS FLKDNLVDLT DVKMSPAEED EEFWGSLKRI
301: ASENDKYEDD PVAPEETGPL QKAQLVQTTS TESEKREEPA VATPGSSEDA KATEASTSSH MSENDLQKG
001: MGLSLSLLLS AWKEVVTTQF FSFKNPVESF LETRSFSLKL KEGGLTSRTN SFKSENPQEK SPKTGMERSL SFNSWEIVTE VETEPMNKED EEIVEPTKPA
101: RNSLNGRNCE RIQITKPTIT PPTPFVFFSP RPVTELDAAA TTLQKVYKSY RTRRNLADCA VVVEELWWKT LDAAALNLSS VAFFEEEKHE TAVSKWARAR
201: TRAAKVGKGL SKDEKAQKLA LQHWLEAIDP RHRYGHNLHF YYDVWSASMS AQPFFYWLDI GDGKDVNLEH HPRSVLQKQC IKYLGPLERE AYEVIVEDGK
301: LMNKQSMTLI NSTEDSKSIF VLSTTRTLYV GQKKKGRFQH SSFLSGGATT AAGRLVAREG ILEAIWPYSG HYLPTEDNFN EFISFLEENN VDMTNVKVRN
401: IIFGCIHAKY EKWYVLTYLI
101: RNSLNGRNCE RIQITKPTIT PPTPFVFFSP RPVTELDAAA TTLQKVYKSY RTRRNLADCA VVVEELWWKT LDAAALNLSS VAFFEEEKHE TAVSKWARAR
201: TRAAKVGKGL SKDEKAQKLA LQHWLEAIDP RHRYGHNLHF YYDVWSASMS AQPFFYWLDI GDGKDVNLEH HPRSVLQKQC IKYLGPLERE AYEVIVEDGK
301: LMNKQSMTLI NSTEDSKSIF VLSTTRTLYV GQKKKGRFQH SSFLSGGATT AAGRLVAREG ILEAIWPYSG HYLPTEDNFN EFISFLEENN VDMTNVKVRN
401: IIFGCIHAKY EKWYVLTYLI
Arabidopsis Description
IQM4IQ domain-containing protein IQM4 [Source:UniProtKB/Swiss-Prot;Acc:O64851]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.