Factsheet for HORVU5Hr1G041930.15

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G137100.1	Wheat	cytosol	94.62	95.21
TraesCS5B01G128200.1	Wheat	cytosol	93.37	93.96
TraesCS5A01G129600.1	Wheat	cytosol	88.41	92.62
HORVU6Hr1G019510.4	Barley	cytosol	90.06	91.0
EES09264	Sorghum	cytosol	75.16	79.78
Os12t0149900-01	Rice	cytosol	78.67	79.66
EES16640	Sorghum	cytosol	72.46	77.43
Zm00001d004916_P001	Maize	cytosol	57.14	75.2
Zm00001d052525_P001	Maize	cytosol	72.67	75.0
GSMUA_Achr3P03060_001	Banana	cytosol	46.79	59.16
CDY13342	Canola	cytosol	54.24	57.46
CDX67541	Canola	cytosol	54.24	57.46
Bra028537.1-P	Field mustard	cytosol	54.04	57.24
CDY13341	Canola	cytosol	21.33	56.91
AT3G52870.1	Thale cress	cytosol	53.42	56.58
KRH30882	Soybean	cytosol	55.28	56.33
CDX95381	Canola	cytosol	53.0	56.14
Bra019642.1-P	Field mustard	cytosol	52.8	55.92
CDX76252	Canola	cytosol	52.8	55.92
KRG96176	Soybean	plastid	53.62	55.46
Solyc10g085610.1.1	Tomato	cytosol	49.9	55.4
VIT_13s0074g00760.t01	Wine grape	nucleus	51.14	55.26
Solyc10g083360.1.1	Tomato	cytosol	53.0	54.94
PGSC0003DMT400072375	Potato	cytosol	53.0	54.94
KRH32680	Soybean	cytosol	54.45	54.45
GSMUA_Achr6P13300_001	Banana	cytosol	54.66	53.33
VIT_08s0007g03630.t01	Wine grape	cytosol	48.86	50.43
PGSC0003DMT400022916	Potato	cytosol	53.21	49.42
Solyc09g009770.2.1	Tomato	nucleus	53.21	48.95
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plastid	52.8	45.54
KRH67885	Soybean	cytosol	33.54	45.51
HORVU1Hr1G045060.3	Barley	nucleus	34.37	44.99
HORVU2Hr1G074420.1	Barley	cytosol	13.66	44.59
HORVU4Hr1G074540.1	Barley	cytosol	22.98	44.22
HORVU2Hr1G015200.2	Barley	cytosol	34.78	42.0
HORVU6Hr1G066990.1	Barley	mitochondrion	12.63	39.61
HORVU5Hr1G093140.18	Barley	cytosol, nucleus	46.58	39.4
HORVU7Hr1G052820.45	Barley	cytosol	19.88	38.87
HORVU5Hr1G023670.50	Barley	cytosol	19.88	38.87
HORVU4Hr1G052500.37	Barley	cytosol, nucleus	19.88	38.87
HORVU3Hr1G010590.3	Barley	nucleus	23.81	38.46
HORVU5Hr1G120690.3	Barley	nucleus	24.02	38.28
HORVU2Hr1G028140.2	Barley	cytosol	43.89	37.39
HORVU2Hr1G028150.1	Barley	cytosol	43.89	35.87
HORVU2Hr1G074410.1	Barley	cytosol, nucleus	10.77	35.62
HORVU3Hr1G049640.1	Barley	plastid	40.17	35.21
HORVU4Hr1G074550.4	Barley	cytosol	44.51	35.13
HORVU5Hr1G110660.2	Barley	mitochondrion	8.49	33.06
HORVU1Hr1G028900.11	Barley	cytosol, mitochondrion, nucleus	39.96	31.69

Protein Annotations

EnsemblPlants:HORVU5Hr1G041930.15	EnsemblPlantsGene:HORVU5Hr1G041930	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000048
InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR31250	PANTHER:PTHR31250:SF10	PFscan:PS50096	SEG:seg	UniParc:UPI000B466740
UniProt:A0A287QYJ5	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chrchr5H:-:318634841..318639003

Molecular Weight (calculated)

53428.9 Da

IEP (calculated)

7.986

GRAVY (calculated)

-0.575

Length

483 amino acids

Sequence
(BLAST)

001: MEVETAMPTP AAGLDRVGSA AREPNHTEAS SPSPAAGGSA NGAATKVQKV YRSYRTRRKL ADSAVVVEEL WWQALDFARL NHSTVSFYDG PEPETAASRW
101: NRVSLNASKV GQGLSKDAKA LKLAFQHWIE AIDPRHRYGH NLHFYYDAWS QTQAGQPFFY WLDIGEGKDV ELPECSRALL KKQCIRYLGP QEREYYEYII
201: KEGKIIHRVS EEALDTSQGP KGTKWIFVMS TAKKLYAGQQ KEKGVFQHSS FLAGGATIAA GRFTAENGVI KSIWAYSGHY KPSGENLNNF MSFLEENGVD
301: LKEVEVGSST KEDYYEDPVP NIKQNPAAAM MASNTPQLIL PSNMVEEDKA SGPSSQTEAD EDNNVRVEQA RPTYQRTLSG GLQSPRDAVV SQDAILERVN
401: SKSKSKSYQL GHRLSLKWST GNGPRIGCVK DYPIELRMQA LEMVQLSPRA STPPASWRVP SCLSPTLPTP PLMPLQASLP QPS

Best Arabidopsis Sequence Match ( AT2G26190.2 )
(BLAST)

001: MGLSLSLLLS AWKEVVTTQF FSFKNPVESF LETRSFSLKL KEGGLTSRTN SFKSENPQEK SPKTGMERSL SFNSWEIVTE VETEPMNKED EEIVEPTKPA
101: RNSLNGRNCE RIQITKPTIT PPTPFVFFSP RPVTELDAAA TTLQKVYKSY RTRRNLADCA VVVEELWWKT LDAAALNLSS VAFFEEEKHE TAVSKWARAR
201: TRAAKVGKGL SKDEKAQKLA LQHWLEAIDP RHRYGHNLHF YYDVWSASMS AQPFFYWLDI GDGKDVNLEH HPRSVLQKQC IKYLGPLERE AYEVIVEDGK
301: LMNKQSMTLI NSTEDSKSIF VLSTTRTLYV GQKKKGRFQH SSFLSGGATT AAGRLVAREG ILEAIWPYSG HYLPTEDNFN EFISFLEENN VDMTNVKVRN
401: IIFGCIHAKY EKWYVLTYLI

Arabidopsis Description

IQM4IQ domain-containing protein IQM4 [Source:UniProtKB/Swiss-Prot;Acc:O64851]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.