Factsheet for GSMUA_Achr3P03060_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P13300_001	Banana	cytosol	74.87	57.78
CDY13341	Canola	cytosol	26.18	55.25
Zm00001d004916_P001	Maize	cytosol	51.31	53.41
EES09264	Sorghum	cytosol	59.16	49.67
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plastid	72.25	49.29
TraesCS5A01G129600.1	Wheat	cytosol	58.64	48.59
Os12t0149900-01	Rice	cytosol	60.47	48.43
VIT_13s0074g00760.t01	Wine grape	nucleus	56.54	48.32
Zm00001d052525_P001	Maize	cytosol	58.9	48.08
EES16640	Sorghum	cytosol	56.81	48.01
Solyc10g085610.1.1	Tomato	cytosol	54.45	47.82
AT3G52870.1	Thale cress	cytosol	56.28	47.15
HORVU6Hr1G019510.4	Barley	cytosol	58.9	47.07
TraesCS5D01G137100.1	Wheat	cytosol	58.9	46.88
HORVU5Hr1G041930.15	Barley	cytosol	59.16	46.79
TraesCS6D01G097300.1	Wheat	cytosol	59.16	46.69
TraesCS5B01G128200.1	Wheat	cytosol	58.64	46.67
TraesCS6B01G137500.1	Wheat	cytosol	58.9	46.58
CDY13342	Canola	cytosol	55.5	46.49
CDX95381	Canola	cytosol	55.5	46.49
CDX76252	Canola	cytosol	55.5	46.49
CDX67541	Canola	cytosol	55.5	46.49
PGSC0003DMT400072375	Potato	cytosol	56.54	46.35
Bra019642.1-P	Field mustard	cytosol	55.24	46.27
Bra028537.1-P	Field mustard	cytosol	55.24	46.27
KRH30882	Soybean	cytosol	57.33	46.2
TraesCS6A01G108900.1	Wheat	cytosol	58.64	46.19
Solyc10g083360.1.1	Tomato	cytosol	56.28	46.14
Zm00001d035377_P001	Maize	cytosol	52.62	46.1
KRG96176	Soybean	plastid	55.76	45.61
KRH32680	Soybean	cytosol	57.59	45.55
VIT_08s0007g03630.t01	Wine grape	cytosol	55.24	45.09
EES09263	Sorghum	cytosol	53.4	44.93
Os11t0151002-00	Rice	cytosol	54.97	44.3
TraesCS6B01G133900.1	Wheat	cytosol	54.97	44.03
TraesCS6D01G093400.1	Wheat	cytosol	54.97	43.75
GSMUA_Achr8P24930_001	Banana	cytosol	43.19	42.86
PGSC0003DMT400022916	Potato	cytosol	56.28	41.35
Solyc09g009770.2.1	Tomato	nucleus	56.54	41.14
GSMUA_Achr4P09170_001	Banana	cytosol	48.95	38.48
GSMUA_Achr8P26270_001	Banana	plastid	47.12	37.5
TraesCS6A01G104600.1	Wheat	nucleus	25.92	36.4
GSMUA_Achr8P05470_001	Banana	plastid	46.07	35.27
GSMUA_Achr4P13570_001	Banana	cytosol	50.0	35.11
GSMUA_Achr4P06580_001	Banana	cytosol	49.21	34.75
GSMUA_Achr7P09200_001	Banana	cytosol, extracellular, nucleus, plastid	46.34	34.71
GSMUA_Achr10P...	Banana	endoplasmic reticulum	46.6	34.43
GSMUA_Achr3P25890_001	Banana	mitochondrion	46.6	34.36
GSMUA_Achr4P08700_001	Banana	extracellular, nucleus, plastid, vacuole	47.91	34.14
GSMUA_Achr6P01520_001	Banana	cytosol	20.94	33.76
GSMUA_Achr6P04920_001	Banana	endoplasmic reticulum, vacuole	45.55	33.66
GSMUA_Achr6P05460_001	Banana	cytosol	47.38	33.27
GSMUA_Achr9P21650_001	Banana	plastid, vacuole	48.43	32.57
KRH67885	Soybean	cytosol	30.1	32.3
GSMUA_Achr4P11190_001	Banana	cytosol	47.64	31.06
GSMUA_Achr6P01560_001	Banana	mitochondrion	20.16	28.84
GSMUA_Achr3P29200_001	Banana	cytosol	46.86	27.97
GSMUA_Achr6P01510_001	Banana	nucleus	13.61	25.12
GSMUA_Achr3P32310_001	Banana	endoplasmic reticulum	48.95	20.75

Protein Annotations

EnsemblPlants:GSMUA_Achr3P03060_001	EnsemblPlants:GSMUA_Achr3T03060_001	EnsemblPlantsGene:GSMUA_Achr3G03060_001	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR31250	PANTHER:PTHR31250:SF10	PFscan:PS50096	SEG:seg
UniParc:UPI000295BD96	UniProt:M0SBC4	MapMan:35.1	:	:	:

Description

calmodulin-binding protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr3G03060_001]

Coordinates

chr3:-:1992076..1996291

Molecular Weight (calculated)

43439.4 Da

IEP (calculated)

8.903

GRAVY (calculated)

-0.467

Length

382 amino acids

Sequence
(BLAST)

001: MEPPVEVGAL AEAVGNSLSP NSPVAQWSES AAATKLQTVY RSYRTRRRLA DSAVVAEELW WQVMDFARLN HSTVSFFDHM KQETPVSRWN RVRLNASKAR
101: SSKDAKALEL AFQHWIEAID PRHRYGHNLH FYYDEWCKSK AGQPFFYWLD IGDGRELDLK DCPRSILCTQ YVKYLSPQER GHYEYVLMDG KVVHRHSGVL
201: LDTTSATKGA KWIFVMSTTK ILYAGQKKKG IFHHSSFLAG GATIAAGRFT AEKGILKCIW AYSGHYRPTE DNFNYFLSFL EQNGVNLSET QILSSSNEDY
301: YDDTNPTQLE KVIEAMEVSK TPRPLLPTEI TATEPSRKTR SYQLGHQLSN KWCSGAGPRI GCVADYPLQV RLQALRVCKS FS

Best Arabidopsis Sequence Match ( AT3G52870.1 )
(BLAST)

001: MQVVSSFDFQ SSPFSHGAGE ILISPVDHRE LSSHGDALEG ACDDSTRLAA VKVQKVYRSY RTRRRLADSV VVAEELWWQA MDYARLNHST ISFFDYSRPE
101: TAVSRWNRVS LNASKVGKGL SIVDKAQKLA FQHWIEAIDP RHRYGHNLHK YYEEWCKADA GQPFFYWLDV GGGIDLDLNE CPRSKLKQQC IRYLGPQERE
201: EYEYVIIEGK IVHKLTGKFL HTMHGSEGTK WIFVMSTFKK LYAGLKKKGR FHHSSFLAGG ATLAAGRVIV DNGVLKTISA YSGHYRPSDD SLDTFLGFLR
301: ENAVNLDNVE VHKASEDSDS YDDYVKSNGG SEPEPLKKED TTFQAETETD ENGNGTVGTL EEAKRSSYQR TLSGGLGSPK ANVPQKSMLL RINSKKQSRS
401: LQLGHQLSLK WSTGVGPRIG CAADYPVQLR TQALEFVNLS PKYRSSRLSP TGKLDV

Arabidopsis Description

IQM3IQ domain-containing protein IQM3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFA4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.