Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX76252 | Canola | cytosol | 97.81 | 97.81 |
| CDY13342 | Canola | cytosol | 88.16 | 88.16 |
| CDX67541 | Canola | cytosol | 87.5 | 87.5 |
| CDY13341 | Canola | cytosol | 34.65 | 87.29 |
| AT3G52870.1 | Thale cress | cytosol | 84.21 | 84.21 |
| KRG96176 | Soybean | plastid | 59.65 | 58.24 |
| Solyc10g083360.1.1 | Tomato | cytosol | 59.21 | 57.94 |
| PGSC0003DMT400072375 | Potato | cytosol | 58.99 | 57.73 |
| Solyc10g085610.1.1 | Tomato | cytosol | 53.95 | 56.55 |
| VIT_08s0007g03630.t01 | Wine grape | cytosol | 57.68 | 56.2 |
| EES09264 | Sorghum | cytosol | 55.48 | 55.6 |
| GSMUA_Achr3P03060_001 | Banana | cytosol | 46.49 | 55.5 |
| KRH30882 | Soybean | cytosol | 57.68 | 55.49 |
| TraesCS5A01G129600.1 | Wheat | cytosol | 55.92 | 55.31 |
| KRH32680 | Soybean | cytosol | 58.55 | 55.28 |
| EES16640 | Sorghum | cytosol | 54.39 | 54.87 |
| Zm00001d052525_P001 | Maize | cytosol | 55.48 | 54.06 |
| Zm00001d004916_P001 | Maize | cytosol | 43.2 | 53.68 |
| HORVU6Hr1G019510.4 | Barley | cytosol | 56.14 | 53.56 |
| TraesCS5B01G128200.1 | Wheat | cytosol | 56.36 | 53.54 |
| TraesCS5D01G137100.1 | Wheat | cytosol | 56.36 | 53.54 |
| Os12t0149900-01 | Rice | cytosol | 55.92 | 53.46 |
| TraesCS6D01G097300.1 | Wheat | cytosol | 56.36 | 53.1 |
| HORVU5Hr1G041930.15 | Barley | cytosol | 56.14 | 53.0 |
| TraesCS6B01G137500.1 | Wheat | cytosol | 55.92 | 52.8 |
| TraesCS6A01G108900.1 | Wheat | cytosol | 56.14 | 52.78 |
| PGSC0003DMT400022916 | Potato | cytosol | 59.87 | 52.5 |
| Zm00001d035377_P001 | Maize | cytosol | 49.78 | 52.06 |
| Solyc09g009770.2.1 | Tomato | nucleus | 59.43 | 51.62 |
| EES09263 | Sorghum | cytosol | 51.32 | 51.54 |
| GSMUA_Achr6P13300_001 | Banana | cytosol | 55.92 | 51.52 |
| TraesCS6D01G093400.1 | Wheat | cytosol | 53.95 | 51.25 |
| Os11t0151002-00 | Rice | cytosol | 53.07 | 51.05 |
| TraesCS6B01G133900.1 | Wheat | cytosol | 53.29 | 50.94 |
| KRH67885 | Soybean | cytosol | 36.18 | 46.35 |
| TraesCS6A01G104600.1 | Wheat | nucleus | 26.97 | 45.22 |
| CDY60813 | Canola | cytosol | 44.52 | 43.94 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, plastid | 53.73 | 43.75 |
| CDX75320 | Canola | endoplasmic reticulum, extracellular | 33.77 | 42.54 |
| CDY06038 | Canola | mitochondrion, nucleus | 6.14 | 38.89 |
| CDX77035 | Canola | plastid | 40.35 | 38.41 |
| CDX68935 | Canola | plastid | 39.25 | 38.17 |
| CDY37478 | Canola | nucleus | 45.39 | 37.3 |
| CDX88987 | Canola | nucleus | 43.64 | 36.05 |
| CDX97500 | Canola | nucleus | 45.39 | 35.94 |
| CDY00568 | Canola | nucleus | 43.86 | 35.71 |
| CDY23623 | Canola | nucleus | 44.96 | 35.71 |
| CDY45026 | Canola | cytosol | 39.91 | 35.34 |
| CDY35312 | Canola | plastid | 40.13 | 34.99 |
| CDY45027 | Canola | extracellular | 0.88 | 33.33 |
| CDY28281 | Canola | cytosol, plastid | 39.91 | 32.67 |
| CDX75719 | Canola | cytosol | 34.65 | 30.27 |
| CDX82532 | Canola | cytosol | 32.02 | 29.08 |
| CDX80650 | Canola | extracellular | 4.61 | 24.14 |
Protein Annotations
| EnsemblPlants:CDX95381 | EnsemblPlantsGene:GSBRNA2T00101094001 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR000048 |
| InterPro:IQ_motif_EF-hand-BS | PANTHER:PTHR31250 | PANTHER:PTHR31250:SF23 | PFscan:PS50096 | ProteinID:CDX95381 | ProteinID:CDX95381.1 |
| UniParc:UPI0004EB7124 | MapMan:35.1 | : | : | : | : |
Description
BnaC04g27770D
Coordinates
chrLK031888:-:854493..857313
Molecular Weight (calculated)
51449.4 Da
IEP (calculated)
7.269
GRAVY (calculated)
-0.569
Length
456 amino acids
Sequence
(BLAST)
(BLAST)
001: MQVVANFDFQ PSPFSHATGE MLISPVGHRD ESFVNFTDAL EGASDDSPPS VAAVKVQKVY RSYRTRRRLA DSVVVAEELW WQAMDYARLN HSTISFFDYS
101: RPETAVSKWN RVSLNASKVG KGLSIVDKAQ KLAFQHWIEA IDPRHRYGHN LHVYYEEWCK ADAGQPFFYW LDVGDGKDMD LIDCSRSKLK QQCIKYLGPQ
201: EREEYEYVII DGKIVHKLTG NFLHTMHGSE GTKWIFVMST FKKLYAGLKK KGRFHHSSFL AGGATLAAGR VVVDNGVLKT ISAYSGHYRP SDDSLETFLS
301: FLRENEVSLD DVEVHKASED SDNYDDYIKP NGDGTKSLKK EYATSCNAET ETDENSNGTF EETKGHSYQR TLSGGFESPK DDVPQKAMLQ RINSKKQSKS
401: LQLGHQLMLK WSTGAGPRIG CAADFPVQLR TQALEFVNLS PRYRTSTLSP TGRLDI
101: RPETAVSKWN RVSLNASKVG KGLSIVDKAQ KLAFQHWIEA IDPRHRYGHN LHVYYEEWCK ADAGQPFFYW LDVGDGKDMD LIDCSRSKLK QQCIKYLGPQ
201: EREEYEYVII DGKIVHKLTG NFLHTMHGSE GTKWIFVMST FKKLYAGLKK KGRFHHSSFL AGGATLAAGR VVVDNGVLKT ISAYSGHYRP SDDSLETFLS
301: FLRENEVSLD DVEVHKASED SDNYDDYIKP NGDGTKSLKK EYATSCNAET ETDENSNGTF EETKGHSYQR TLSGGFESPK DDVPQKAMLQ RINSKKQSKS
401: LQLGHQLMLK WSTGAGPRIG CAADFPVQLR TQALEFVNLS PRYRTSTLSP TGRLDI
001: MQVVSSFDFQ SSPFSHGAGE ILISPVDHRE LSSHGDALEG ACDDSTRLAA VKVQKVYRSY RTRRRLADSV VVAEELWWQA MDYARLNHST ISFFDYSRPE
101: TAVSRWNRVS LNASKVGKGL SIVDKAQKLA FQHWIEAIDP RHRYGHNLHK YYEEWCKADA GQPFFYWLDV GGGIDLDLNE CPRSKLKQQC IRYLGPQERE
201: EYEYVIIEGK IVHKLTGKFL HTMHGSEGTK WIFVMSTFKK LYAGLKKKGR FHHSSFLAGG ATLAAGRVIV DNGVLKTISA YSGHYRPSDD SLDTFLGFLR
301: ENAVNLDNVE VHKASEDSDS YDDYVKSNGG SEPEPLKKED TTFQAETETD ENGNGTVGTL EEAKRSSYQR TLSGGLGSPK ANVPQKSMLL RINSKKQSRS
401: LQLGHQLSLK WSTGVGPRIG CAADYPVQLR TQALEFVNLS PKYRSSRLSP TGKLDV
101: TAVSRWNRVS LNASKVGKGL SIVDKAQKLA FQHWIEAIDP RHRYGHNLHK YYEEWCKADA GQPFFYWLDV GGGIDLDLNE CPRSKLKQQC IRYLGPQERE
201: EYEYVIIEGK IVHKLTGKFL HTMHGSEGTK WIFVMSTFKK LYAGLKKKGR FHHSSFLAGG ATLAAGRVIV DNGVLKTISA YSGHYRPSDD SLDTFLGFLR
301: ENAVNLDNVE VHKASEDSDS YDDYVKSNGG SEPEPLKKED TTFQAETETD ENGNGTVGTL EEAKRSSYQR TLSGGLGSPK ANVPQKSMLL RINSKKQSRS
401: LQLGHQLSLK WSTGVGPRIG CAADYPVQLR TQALEFVNLS PKYRSSRLSP TGKLDV
Arabidopsis Description
IQM3IQ domain-containing protein IQM3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFA4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.