Factsheet for Solyc09g009770.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400022916	Potato	cytosol	93.71	94.62
Solyc10g083360.1.1	Tomato	cytosol	59.24	66.74
Solyc10g085610.1.1	Tomato	cytosol	54.67	65.98
CDY13341	Canola	cytosol	21.9	63.54
KRG96176	Soybean	plastid	53.9	60.6
Bra028537.1-P	Field mustard	cytosol	52.57	60.53
CDX67541	Canola	cytosol	52.57	60.53
CDY13342	Canola	cytosol	52.38	60.31
AT3G52870.1	Thale cress	cytosol	52.19	60.09
CDX95381	Canola	cytosol	51.62	59.43
Bra019642.1-P	Field mustard	cytosol	51.43	59.21
CDX76252	Canola	cytosol	51.43	59.21
KRH30882	Soybean	cytosol	53.14	58.86
KRH32680	Soybean	cytosol	53.9	58.59
EES09264	Sorghum	cytosol	49.33	56.92
GSMUA_Achr3P03060_001	Banana	cytosol	41.14	56.54
VIT_08s0007g03630.t01	Wine grape	cytosol	49.71	55.77
HORVU6Hr1G019510.4	Barley	cytosol	49.33	54.18
TraesCS6B01G137500.1	Wheat	cytosol	49.71	54.04
EES16640	Sorghum	cytosol	46.48	53.98
TraesCS5D01G137100.1	Wheat	cytosol	49.33	53.96
TraesCS5B01G128200.1	Wheat	cytosol	49.14	53.75
Zm00001d052525_P001	Maize	cytosol	47.81	53.63
TraesCS6A01G108900.1	Wheat	cytosol	49.52	53.61
TraesCS6D01G097300.1	Wheat	cytosol	49.33	53.51
Os12t0149900-01	Rice	cytosol	48.38	53.25
HORVU5Hr1G041930.15	Barley	cytosol	48.95	53.21
TraesCS5A01G129600.1	Wheat	cytosol	46.67	53.15
Zm00001d035377_P001	Maize	cytosol	43.62	52.52
Zm00001d004916_P001	Maize	cytosol	36.57	52.32
Os11t0151002-00	Rice	cytosol	46.86	51.9
EES09263	Sorghum	cytosol	44.57	51.54
GSMUA_Achr6P13300_001	Banana	cytosol	48.57	51.52
TraesCS6D01G093400.1	Wheat	cytosol	46.48	50.83
TraesCS6B01G133900.1	Wheat	cytosol	45.33	49.9
Solyc03g121770.1.1	Tomato	cytosol	24.76	48.69
KRH67885	Soybean	cytosol	31.62	46.63
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plastid	48.76	45.71
TraesCS6A01G104600.1	Wheat	nucleus	22.29	43.01
Solyc07g040710.2.1	Tomato	cytosol	36.38	40.99
Solyc12g008960.1.1	Tomato	nucleus	37.52	39.96
Solyc01g044420.2.1	Tomato	nucleus	38.1	34.72
Solyc10g078650.1.1	Tomato	nucleus	38.29	33.11
Solyc01g005800.2.1	Tomato	nucleus	38.67	30.71
Solyc10g080640.1.1	Tomato	nucleus	36.95	30.65
Solyc08g062930.1.1	Tomato	cytosol	22.29	30.0

Protein Annotations

EnsemblPlants:Solyc09g009770.2.1	EnsemblPlantsGene:Solyc09g009770.2	PANTHER:PTHR31250	PANTHER:PTHR31250:SF10	SEG:seg	UniParc:UPI000276C8DB
UniProt:K4CR06	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr9:-:3250283..3254099

Molecular Weight (calculated)

58326.7 Da

IEP (calculated)

8.102

GRAVY (calculated)

-0.561

Length

525 amino acids

Sequence
(BLAST)

001: MEVETTGVSN FDLNNSSSQV SSLPPYRKLI DMSGCKLTEL RIPDFRSSDD MPELEGFGSP VSAGVECENG MVSFPASPSV SENVGQERDF TESVEKTPSN
101: AAKRLQKVYR SYRTRRMLAD SAVVAEELWW QAIDYARLNH STISFFDYSK PETAVSRWNR VGLNASKVGK GLSKDAEAQT LAFQHWIEAI DPRHRYGHNM
201: HIYYEEWCKT DAGQPFFFWL DLGDGRKVDL KECPRAKLQK QCIKYLGPQE RQHYEYIIAG GQILHKLTRT SLDTTKGPEG AKWIFVMSTS KRLYAGEKKK
301: GMFHHSSFLA GGAALAAGRL VVQDGTVKSI SPYSGHYRPS DDSLDTFLSI LKEHGVNVDE VEIKKASEDY DTSTDVNIKS IDKRPPKLST PPPSVEEEKQ
401: VHSTESIGSP QAATSPTCCY QRTLSGGLHS PRTEVPKTAI LERINSKKSS RSYQLGHQLS RVWSTGAGPR IGCIADYPAE LRWQALELTN VSPKPSPSST
501: PRPLDALCSP TCSSPVFNNV LVKSS

Best Arabidopsis Sequence Match ( AT3G52870.1 )
(BLAST)

001: MQVVSSFDFQ SSPFSHGAGE ILISPVDHRE LSSHGDALEG ACDDSTRLAA VKVQKVYRSY RTRRRLADSV VVAEELWWQA MDYARLNHST ISFFDYSRPE
101: TAVSRWNRVS LNASKVGKGL SIVDKAQKLA FQHWIEAIDP RHRYGHNLHK YYEEWCKADA GQPFFYWLDV GGGIDLDLNE CPRSKLKQQC IRYLGPQERE
201: EYEYVIIEGK IVHKLTGKFL HTMHGSEGTK WIFVMSTFKK LYAGLKKKGR FHHSSFLAGG ATLAAGRVIV DNGVLKTISA YSGHYRPSDD SLDTFLGFLR
301: ENAVNLDNVE VHKASEDSDS YDDYVKSNGG SEPEPLKKED TTFQAETETD ENGNGTVGTL EEAKRSSYQR TLSGGLGSPK ANVPQKSMLL RINSKKQSRS
401: LQLGHQLSLK WSTGVGPRIG CAADYPVQLR TQALEFVNLS PKYRSSRLSP TGKLDV

Arabidopsis Description

IQM3IQ domain-containing protein IQM3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFA4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.